Visible radiation effects on flavocytochrome b2 in dilute aqueous solution: a steady-state and laser flash photolysis study

Irradiation of flavocytochrome b2 by visible radiation at 450 nm in dilute aqueous solution is found to have a devastating effect not only on its activity but also on the important flavin mononucleotide (FMN) constituents. The active site and the substrate binding site are also found to be largely modified on exposure to visible radiation. This has a telling effect on the constituent aromatic amino acids, tryptophan and tyrosine, and therefore justifies the role of FMN as a very potent photosensitizer. Partial unfolding of the irradiated enzyme molecule is also observed. Damage is much greater in deaerated conditions, which indicates that molecular oxygen plays a protecting role in this particular system. The inactivation is mediated through rapid electron transfer from tryptophan and tyrosine to excited flavin, forming flavin semiquinone and tryptophanyl and tyrosinyl radicals, which in turn cause permanent damage at the molecular level.     

Determination of the molecular weight of polyacrylamide fractions by osmometry

The polymerization of acrylamide, initiated with permanganate/oxalic acid, has been studied at 35 ± 0.2 in an aqueous medium under nitrogen. Samples of polyacrylamide were fractionated by the triangular fractionation method using methanol as non-solvent. Molecular weights of the fractions have been determined by viscometry and osmometry. Integral and differential distribution curves were plotted using the fractionation data. The narrow molecular weight distribution for high conversion polymers has been discussed. For fractionated samples of polyacrylamide in water at 30°, the equation $\text{[η]}{}_{\mathrm{ml/g}}\text{= 6.5 × 10}{}^{\mathrm{?3}}\text{M}{}_{\mathrm{n}}{}^{0.82}$ is applicable for the molecular weight range 4 × 10⁴ to 127 × 10⁴. This equation is very similar to the equation $\text{[η]}{}_{\mathrm{ml/g}}\text{= 6.31 × 10}{}^{\mathrm{?3}}\text{M}{}_{\mathrm{/}}{}^{0.80}$ of Scholtan. Other parameters (osmotic second virial coefficient and unperturbed dimension) have also been evaluated.     

Influence of intervening mismatches on long-range guanine oxidation in DNA duplexes

A systematic investigation of the efficiency of oxidative damage at guanine residues through long-range charge transport was carried out as a function of intervening base mismatches. A series of DNA oligonucleotides were synthesized that incorporate a ruthenium intercalator linked covalently to the 5' terminus of one strand and containing two 5'-GG-3' sites in the complementary strand. Single base mismatches were introduced between the two guanine doublet steps, and the efficiency of transport through the mismatches was determined through measurements of the ratio of oxidative damage at the guanine doublets distal versus proximal to the intercalated ruthenium oxidant. Differing relative extents of guanine oxidation were observed for the different mismatches. The damage ratio of oxidation at the distal versus proximal site for the duplexes containing different mismatches varies in the order GC approximately GG approximately GT approximately GA > AA > CC approximately TT approximately CA approximately CT. For all assemblies, damage found with the Delta-Ru diastereomer was found to be greater than with the Lambda-diastereomer. The extent of distal/proximal guanine oxidation in different mismatch-containing duplexes was compared with the helical stability of the duplexes, electrochemical data for intercalator reduction on different mismatch-containing DNA films, and base-pair lifetimes for oligomers containing the different mismatches derived from 1H NMR measurements of the imino proton exchange rates. While a clear correlation is evident both with helix stability and electrochemical data monitoring reduction of an intercalator through DNA films, damage ratios correlate most closely with base-pair lifetimes. Competitive hole trapping at the mismatch site does not appear to be a key factor governing the efficiency of transport through the mismatch. These results underscore the importance of base dynamics in modulating long-range charge transport through the DNA base-pair stack.     

Synthesis of nanostructured Cd–Se–Te films through periodic voltammetry for photoelectrochemical applications

In the present investigation, polycrystalline semiconductor Cd–Se–Te films have been electrodeposited at room temperature on conducting glass substrates using cyclic voltammetric technique under controlled periodic scans. The successive anodic and cathodic scans were recorded within the potential range, from 0 to −1.0 V, and over the range of periodic cycles, from 250 to 2,000, in an acidic bath containing respective reducible precursor ions like Cd²⁺, Se⁴⁺, Te⁴⁺, and 1 vol.% Triton X-100 as the surface-active reagent. Thin composite films were produced having variable thickness and composition and grain size of the order of 80–100 nm. The film properties were determined by focused ion beam analysis, energy dispersive analysis of x-rays, x-ray diffraction studies, atomic force microscopy, and scanning electron microscopy. Thickness of the semiconductor films was found to increase linearly with the number of voltammetric cycles. Band gap energies of the films as derived from the reflectance spectra were found to lie between 1.4 and 1.7 eV. The composite films of the Cd–Se–Te ternary system when electrochemically characterized in aqueous polysulfide solution exhibited n-type semiconducting properties and photoconversion efficiency more than 0.4%.