Interchenar retrotransfer of aureothin intermediates in an iterative polyketide synthase module

The course of the enigmatic iterative use of a polyketide synthase module was deduced from targeted domain inactivation in the aureothin assembly line. Mutational analyses revealed that the N-terminus of AurA is not involved in the iteration process, ruling out an ACP-ACP shuttle. Furthermore, an AurA(KS°, ACP°)-AurA(AT(0)) heterodimer proved to be nonfunctional, whereas aureothin production was restored in a ΔaurA mutant complemented with AurA(KS°)-AurA(ACP°). This finding supports a model according to which the ACP-bound polyketide intermediate is transferred back to the KS domain on the opposite PKS strand.     

Fully functionalized small-molecule probes for integrated phenotypic screening and target identification

Phenotypic screening offers a powerful approach to identify small molecules that perturb complex biological processes in cells and organisms. The tendency of small molecules, however, to interact with multiple protein targets, often with moderate to weak affinities, along with the lack of straightforward technologies to characterize these interactions in living systems, has hindered efforts to understand the mechanistic basis for pharmacological activity. Here we address this challenge by creating a fully functionalized small-molecule library whose membership is endowed with: (1) one or more diversity elements to promote interactions with different protein targets in cells, (2) a photoreactive group for UV light-induced covalent cross-linking to interacting proteins, and (3) an alkyne handle for reporter tag conjugation to visualize and identify cross-linked proteins. A library member was found to inhibit cancer cell proliferation selectively under nutrient-limiting (low glucose) conditions. Quantitative chemoproteomics identified MT-ND1, an integral membrane subunit of the ～1 MDa NADH:ubiquinone oxidoreductase (complex 1) involved in oxidative phosphorylation, as a specific target of the active probe. We further demonstrated that the active probe inhibits complex 1 activity in vitro (IC(50) = 720 nM), an effect that is known to induce cell death in low-glucose conditions. Based on this proof of principle study, we anticipate that the generation and integration of fully functionalized compound libraries into phenotypic screening programs should facilitate the discovery of bioactive probes that are amenable to accelerated target identification and mechanistic characterization using advanced chemoproteomic technologies.     

A physical approach to specifically improve the mobility of alkane liquid drops

Seamless control of resistance to liquid drop movement for polar (water) and nonpolar alkane (n-hexadecane, n-dodecane, and n-decane) probe liquids on substrate surfaces was successfully demonstrated using molten linear poly(dimethylsiloxane) (PDMS) brush films with a range of different molecular weights (MWs). The ease of movement of liquid drops critically depended on polymer chain mobility as it relates to both polymer MW and solvent swelling on these chemically- and topographically identical surfaces. Our brush films therefore displayed lower resistances to liquid drop movement with decreasing polymer MW and surface tension of probe liquid as measured by contact angle (CA) hysteresis and tilt angle measurements. Subsequently, while mobility of water drops was inferior and became worse at higher MWs, n-decane drops were found to experience little resistance to movement on these polymer brush films. Calculating CA hysteresis as Δθ(cos) = cos θ(R) - cos θ(A) (θ(A) and θ(R) are the advancing and receding CAs, respectively) rather than the standard Δθ = θ(A) - θ(R) was found to be advantageous for estimation of the actual dynamic dewetting behavior of various probe liquids on an inclined substrate.     

Highly selective carbon dioxide uptake by [Cu(bpy-n)2(SiF6)] (bpy-1 = 4,4'-bipyridine; bpy-2 = 1,2-bis(4-pyridyl)ethene)

A previously known class of porous coordination polymer (PCP) of formula [Cu(bpy-n)(2)(SiF(6))] (bpy-1 = 4,4'-bipyridine; bpy-2 = 1,2-bis(4-pyridyl)ethene) has been studied to assess its selectivity toward CO(2), CH(4), N(2), and H(2)O. Gas sorption measurements reveal that [Cu(bpy-1)(2)(SiF(6))] exhibits the highest uptake for CO(2) yet seen at 298 K and 1 atm by a PCP that does not contain open metal sites. Significantly, [Cu(bpy-1)(2)(SiF(6))] does not exhibit particularly high uptake under the same conditions for CH(4), N(2), and, H(2)O, presumably because of its lack of open metal sites. Consequently, at 298 K and 1 atm [Cu(bpy-1)(2)(SiF(6))] exhibits a relative uptake of CO(2) over CH(4) of ca. 10.5:1, the highest value experimentally observed in a compound without open metal sites. [Cu(bpy-2)(2)(SiF(6))] exhibits larger pores and surface area than [Cu(bpy-1)(2)(SiF(6))] but retains a high CO(2)/CH(4) relative uptake of ca. 8:1.     

Improved ruthenium catalysts for Z-selective olefin metathesis

Several new C-H-activated ruthenium catalysts for Z-selective olefin metathesis have been synthesized. Both the carboxylate ligand and the aryl group of the N-heterocyclic carbene have been altered and the resulting catalysts evaluated using a range of metathesis reactions. Substitution of bidentate with monodentate X-type ligands led to a severe attenuation of metathesis activity and selectivity, while minor differences were observed between bidentate ligands within the same family (e.g., carboxylates). The use of nitrato-type ligands in place of carboxylates afforded a significant improvement in metathesis activity and selectivity. With these catalysts, turnover numbers approaching 1000 were possible for a variety of cross-metathesis reactions, including the synthesis of industrially relevant products.     

Single molecule imaging of oxygenation of cobalt octaethylporphyrin at the solution/solid interface: thermodynamics from microscopy

For the first time, the pressure and temperature dependence of a chemical reaction at the solid/solution interface is studied by scanning tunneling microscopy (STM), and thermodynamic data are derived. In particular, the STM is used to study the reversible binding of O(2) with cobalt(II) octaethylporphyrin (CoOEP) supported on highly oriented pyrolytic graphite (HOPG) at the phenyloctane/CoOEP/HOPG interface. The adsorption is shown to follow the Langmuir isotherm with P(1/2)(298K) = 3200 Torr. Over the temperature range of 10-40 °C, it was found that ΔH(P) = -68 ± 10 kJ/mol and ΔS(P) = -297 ± 30 J/(mol K). The enthalpy and entropy changes are slightly larger than expected based on solution-phase reactions, and possible origins of these differences are discussed. The big surprise here is the presence of any O(2) binding at room temperature, since CoOEP is not expected to bind O(2) in fluid solution. The stability of the bound oxygen is attributed to charge donation from the graphite substrate to the cobalt, thereby stabilizing the polarized Co-O(2) bonding. We report the surface unit cell for CoOEP on HOPG in phenyloctane at 25 °C to be A = (1.46 ± 0.1)n nm, B = (1.36 ± 0.1)m nm, and α = 54 ± 3°, where n and m are unknown nonzero non-negative integers.     

Line shape distortion effects in infrared spectroscopy

This paper explores different phenomena that cause distortions of infrared absorption spectra by mixing of reflective and absorptive band shape components of infrared spectra, and the resulting distortion of observed band shapes. In the context of this paper, we refer to the line shape of the variations of the refractive index in spectral regions of an absorption maximum (i.e., in regions of "anomalous dispersion") as "dispersive" or "reflective" line shape contributions, in analogy to previous spectroscopic literature. These distortions usually result in asymmetric bands with a negative intensity contribution at the high wavenumber of the band, accompanied by a shift toward lower wavenumber, and confounded band intensities. In extreme cases of band distortions caused by the "resonance Mie" (RMie) mechanism, spectral peaks may be split into doublets of peaks, change from positive to negative peaks, or appear as derivative-shaped features.     

Ruthenium(II) Photosensitizers of Tridentate Click‐Derived Cyclometalating Ligands: A Joint Experimental and Computational Study

A systematic series of heteroleptic bis(tridentate)ruthenium(II) complexes of click‐derived 1,3‐bis(1,2,3‐triazol‐4‐yl)benzene N^C^N‐coordinating ligands was synthesized, analyzed by single crystal X‐ray diffraction, investigated photophysically and electrochemically, and studied by computational methods. The presented comprehensive characterization allows a more detailed understanding of the radiationless deactivation mechanisms. Furthermore, we provide a fully optimized synthesis and systematic variations towards redox‐matched, broadly and intensely absorbing, cyclometalated ruthenium(II) complexes. Most of them show a weak room‐temperature emission and a prolonged excited‐state lifetime. They display a broad absorption up to 700 nm and high molar extinction coefficients up to 20 000 M ^?1 cm^?1 of the metal‐to‐ligand charge transfer bands, resulting in a black color. Thus, the complexes reveal great potential for dye‐sensitized solar‐cell applications.     

Synthesis and Optical Properties of Diaza‐ and Tetraazatetracenes

A series of functionalized diaza‐ and tetraazatetracenes was synthesized, either by condensation of an aromatic diamine with an ortho‐quinone/diethyloxalate followed by chlorination with POCl₃ to give diazatetracenes or by palladium‐catalyzed coupling of a phenylenediamine with various 2,3‐dichloroquinoxalines to give tetraazatetracenes (after oxidation with MnO₂). Representative examples included halogenated and nitrated derivatives. The optical properties of these azatetracenes were discussed with respect to their molecular structures and substitution patterns. The diazatetracenes and tetraazatetracenes formed two different groups that had significantly different electronic structures and properties. Furthermore, 1,2,3,4‐tetrafluoro‐6,11‐bis((triisopropylsilyl)ethynyl)benzo[b]phenazine was synthesized, which is the first reported fluorinated diazatetracene. Single‐crystal X‐ray analysis of this compound is reported.     

Hydroformylation by Pt-Sn compounds from N-heterocyclic stannylenes

[(Me(2)Si{NAr}(2))-κ(2)N,N']Sn, reacts with PtCl(2)(L(2)) and [PtCl(μ-Cl)(L)](2) to afford products containing Pt-Sn bonds. In the absence of supporting ligands L, coordination of the stannylene and rearrangement to a structurally unique PtSn(2)N(2)Si metallacycle occurs. The hydroformylation activity of a representative Pt-Sn compound is investigated.