Total synthesis and biological evaluation of marinopyrrole A and analogues

A five-step total synthesis of the antibiotic marinopyrrole A (1) is described. The developed synthetic technology enabled the synthesis of several marinopyrrole A analogs whose antibacterial properties against methicillin-resistant Staphylococcus aureus TCH1516 were evaluated.     

FTIR spectroscopy of biodegraded historical textiles

Fungal attack is a common and severe problem in the storage rooms of museums. Fungi can damage different materials; organic materials are especially sensitive. In this work two different FTIR spectroscopy methods (micro-spectroscopy with diamond anvil cell and ATR) were used to investigate structural changes on biodeteriorated and non-affected textile fibres obtained from different Slovene museums and sacred objects. Several structural changes were observed in spectra of biodeteriorated as well as of non-affected cellulosic fibres, whereas no changes were observed in proteinaceous fibres. In the scope of spectral analysis crystallinity index has also been calculated by comparing two different band ratios. The research showed that the crystallinity index, calculated from the band intensity ratio I₁₃₇₂/I₂₉₀₀ groups fibres into two groups; biodeteriorated fibres predominantly have lower crystallinity index.     

Conformational properties of <Emphasis Type="Italic">ortho</Emphasis>-nitrobenzenesulfonamide in gas and crystalline phases. Intra- and intermolecular hydrogen bond

A combined gas-phase electron diffraction and quantum chemical (B3LYP/6-311+G**, B3LYP/cc-pvtz, MP2/cc-pvtz) study of molecular structure of 2-nitrobenzenesulfonamide (2-NBSA) was carried out. Quantum chemical calculations showed that 2-NBSA has four conformers, two of which are stabilized by intramolecular hydrogen bond. The latter (with the S–N bond in a close to orthogonal position around the phenyl ring and differing from each other by staggered or eclipsed positions of the N–H and S=O bonds in the SO₂NH₂ group) presented in a saturated vapor over 2-NBSA at T = 433 (3) K in commensurable amounts. Experimental internuclear distances (Ǻ) for the staggered conformer are (?): r _h1(C–H)_av. = 1.071(9), r _h1(C–C)_av. = 1.390(4), r _h1(C–S) = 1.789(8), r _h1(S=O)_av. = 1.427(6), r _h1(S–N) = 1.644(6), r _h1(N–O)_av. = 1.221(4), r _h1(C′–N) = 1.487(8), r _h1(N–H)_av. = 1.014. Calculations at B3LYP/cc-pvtz level were performed to determine the structure and the energies of the transition states between conformers. It was shown that the conformer structures of free molecule differ from those of a molecule stabilized by intermolecular hydrogen bonds in a crystal. Influence of a substituent X (X = –CH₃, –NO₂) on conformational features of the ortho-substituted benzenesulfonamide was established.     

Low-temperature tunneling and rotational dynamics of the ammonium cations in (NH4)2B12H12

Low-temperature neutron scattering spectra of diammonium dodecahydro-closo-dodecaborate [(NH(4))(2)B(12)H(12)] reveal two NH(4)(+) rotational tunneling peaks (e.g., 18.5 μeV and 37 μeV at 4 K), consistent with the tetrahedral symmetry and environment of the cations. The tunneling peaks persist between 4 K and 40 K. An estimate was made for the tunnel splitting of the first NH(4)(+) librational state from a fit of the observed ground-state tunnel splitting as a function of temperature. At temperatures of 50 K-70 K, classical neutron quasi-elastic scattering appears to dominate the spectra and is attributed to NH(4)(+) cation jump reorientation about the four C(3) axes defined by the N-H bonds. A reorientational activation energy of 8.1 ± 0.6 meV (0.79 ± 0.06 kJ/mol) is determined from the behavior of the quasi-elastic linewidths in this temperature regime. This activation energy is in accord with a change in NH(4)(+) dynamical behavior above 70 K. A low-temperature inelastic neutron scattering feature at 7.8 meV is assigned to a NH(4)(+) librational mode. At increased temperatures, this feature drops in intensity, having shifted entirely to higher energies by 200 K, suggesting the onset of quasi-free NH(4)(+) rotation. This is consistent with neutron-diffraction-based model refinements, which derive very large thermal ellipsoids for the ammonium-ion hydrogen atoms at room temperature in the direction of reorientation.     

Laser-induced alignment and anti-alignment of rotationally excited molecules

We numerically investigate the post-pulse alignment of rotationally excited diatomic molecules upon nonresonant interaction with a linearly polarized laser pulse. In addition to the simulations, we develop a simple model which qualitatively describes the shape and amplitude of post-pulse alignment induced by a laser pulse of moderate power density. In our treatment we take into account that molecules in rotationally excited states can interact with a laser pulse not only by absorbing energy but also by stimulated emission. The extent to which these processes are present in the interaction depends, on the one hand, on the directionality of the molecular angular momentum (given by the M quantum number), and on the other hand on the ratio of transition frequencies and pulse duration (determined by the J number). A rotational wave packet created by a strong pulse from an initially pure state contains a broad range of rotational levels, over which the character of the interaction can change from non-adiabatic to adiabatic. Depending on the laser pulse duration and amplitude, the transition from the non-adiabatic to the adiabatic limit proceeds through a region with dominant rotational heating, or alignment, for short pulses and a large region with rotational cooling, and correspondingly preferred anti-alignment, for longer pulses.     

Numerical Stochastic Model of Non-stationary Time Series of the Wind Chill Index

A numerical stochastic model of the high-resolution time series of the wind chill index is considered. The model is constructed under the assumption that time series of the wind chill index are non-stationary non-Gaussian random processes with time-dependent one-dimensional distributions. This assumption makes possible to take into account both daily and seasonal variations of real meteorological processes. Data of the long-term real observations at weather stations were used for estimating the model parameters and for the verification of the model. Based on the simulated trajectories, some statistical properties of rare and adverse weather events, like long periods of time with a low wind chill index, are studied. The model is also used to study the dependence of the statistical properties of the wind chill index time series on a climate change.

     

利用共振镜生物传感器研究牛胰脱氧核糖核酸酶Ⅰ与DNA的相互作用

利用IAsys共振镜生物传感器研究了牛胰脱氧核糖核酸酶Ⅰ(Bp DNase Ⅰ)与DNA的相互作用.求出了不同温度下,Bp DNase Ⅰ与DNA相互作用的结合和解离的动力学速率常数(Kass,Kdiss)和平衡常数(KA,KD),并且计算出了该过程的热力学参数(ΔH和TΔS).在298 K时该结合过程的KA=(3.521 2±0.232 4)×105(mol/L)-1,KD=(2. 852 4±0. 188 3)×10-6 mol/L,TΔS 为(84. 860±3. 712) kJ/mol,该结合过程的ΔH 为(53.222±3.548) kJ/mol,是一个熵驱动的过程.本文还对Mg2 浓度对Bp DNase Ⅰ与DNA的相互作用的影响进行了研究.在相同温度下,Bp DNase Ⅰ与DNA的结合作用在有Mg2 存在时较无Mg2 存在时高约30.5 倍,表明Mg2 能极大地提高Bp DNase Ⅰ与DNA的结合能力.     

Mémoire sur la représentation finie des fonctions continues

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