pH-dependent modification of lipophilicity of porphyrin-type photosensitizers

Structural modifications of photosensitizers (changes in protonation, ionic state and aggregation state) under different environmental conditions should be precisely determined to understand the interaction of the photosensitizers with biological systems. In the present study partition coefficients of hematoporphyrin IX (HpIX), disulfonated meso-tetraphenylporphine, meso-tetra(3-hydroxyphenyl)porphine (mTHPP) and meso-tetra(3-hydroxyphenyl)chlorin in the 1-octanol-phosphate buffer system were determined in the pH region 4.0-8.0. Only the partition coefficients of HpIX and mTHPP were found to be pH dependent. Computer processing of fluorimetric titration data was applied to estimate pKa values of the imino nitrogens of mTHPP. Monoprotonated species of mTHPP seem to be unstable or nonexistent. The possibility that both imino nitrogens of this dye are protonated according to a common pKa is proposed. The pKa value of the imino nitrogens of mTHPP was found to be 2.99 +/- 0.04 after the application of a model taking aggregation of the drug into account. The contributions of various aqueous ionic species of mTHPP as functions of pH were calculated and compared with partition coefficients.     

A new class of arylpiperazine derivatives: the library synthesis on SynPhase lanterns and biological evaluation on serotonin 5-HT(1A) and 5-HT(2A) receptors

An efficient solid-supported method for the synthesis of a new class of arylpiperazine derivatives containing amino acid residues has been developed. A 72-membered library was synthesized on SynPhase Lanterns functionalized by a BAL linker. A one-pot cleavage/cyclization step of aspartic and glutamic acid derivatives yielded succinimide- and pyroglutamyl-containing ligands (chemsets 9 and 10). The library representatives under study showed different levels of affinity for 5-HT(1A) and 5-HT(2A) receptors (estimated K(i) = 24-4000 and 1-2130 nM, respectively). Several dual 5-HT(1A)/5-HT(2A) ligands were found, of which two (9(3,3) and 9(3,5)) displayed high 5-HT(2A) affinity comparable to that of the reference drug ritanserin. A set of individual fragment contributions for the prediction of 5-HT(1A) and 5-HT(2A) affinity of all the library members were defined on the basis of the Free-Wilson analysis of 26 compounds. An alkylarylpiperazine fragment had essentially the same impact on the affinity for both receptors, whereas different terminal amide fragments were preferred by 5-HT(1A) (chemset 17, R(2) = adamantyl) and 5-HT(2A) (chemset 9, R(2) = norborn-2-ylmethyl) binding sites.     

Standardless energy-dispersive X-ray fluorescence analysis using primary radiation monochromatized with LiF(200) crystal

Energy-dispersive X-ray fluorescence spectrometer (EDXRF) with primary radiation monochromatized by LiF(200) crystal was developed. In the constructed spectrometer, the radiation from the Ag target X-ray tube operated at 50 kV and 40 mA excites the secondary target (Cu, Se, Zr or Mo). The characteristic radiation (Cu K_α, Se K_α, Zr K_α or Mo K_α) of the target is monochromatized with LiF(200) crystal and excites elements in the analyzed sample. The X-ray spectra are collected by thermoelectrically cooled Si-PIN detector with resolution of 145 eV at 5.9 keV. The pinhole collimator placed in front of the X-ray detector allows reducing size of the analyzed area. Quantitative analysis is performed using standardless fundamental parameters (FP) method. Because sample is excited using highly monochromatized radiation, the calculations are much simpler and analysis error resulting from uncertainty of X-ray tube spectral distribution is completely eliminated. Moreover, EDXRF system allows obtaining very low background and appropriate secondary target can be selected for the best excitation of the determined elements and to avoid overlapping of the analyte peaks with characteristic radiation originating from the secondary target. The FP calculations were verified using several certified reference materials of stainless steel. The spectrometer was used for nondestructive analysis of mono- and polycrystals of selenide spinels of general formula M_xN_yCr_zSe₄ (where M, N are Cu²⁺, Zn²⁺, Cd²⁺, Mn²⁺, Ge²⁺, Ni²⁺, V³⁺, Sb³⁺, Ga³⁺). The results from EDXRF were compared with those obtained by means of the wavelength-dispersive X-ray fluorescence spectrometry (WDXRF).     

Protolytic dissociation of cyanophenols in ground and excited states in alcohol and water solutions

The effect of cyano substituents on acidity in ground and excited states of mono- and dicyanophenols was investigated. The equilibrium dissociation constants of 3,4-dicyanophenol in ground and lowest excited states in water solution and the change of these constants in the excited state during the transfer to the ground state for o-, m-, p-cyanophenol and 3,4-dicyanophenol in alcohol and water solutions were determined. It was shown that the cyano substitution increases the acidity of ortho-, meta- and dicyano-derivative in ground state in comparison to the phenol, which makes the anions of these derivatives appear in solutions from methanol to 1-butanol. In the excited state the acidity of investigated compounds changes significantly in comparison to the ground state. 3,4-Dicyanophenol is the strongest acid in the lowest excited singlet state, while p-cyanophenol is the weakest one in both alcohol and water solutions. The distribution of the electronic charge and dipole moments of all investigated cyanophenols in ground and excited states were determined on the basis of ab initio calculations using the GAMESS program.     

Impact of TiO2 Reduction and Cu Doping on Bacteria Inactivation under Artificial Solar Light Irradiation

Preparation of TiO₂ using the hydrothermal treatment in NH₄OH solution and subsequent thermal heating at 500–700 °C in Ar was performed in order to introduce some titania surface defects. The highest amount of oxygen vacancies and Ti³⁺ surface defects were observed for a sample heat-treated at 500 °C. The presence of these surface defects enhanced photocatalytic properties of titania towards the deactivation of two bacteria species, E. coli and S. epidermidis, under artificial solar lamp irradiation. Further modification of TiO₂ was targeted towards the doping of Cu species. Cu doping was realized through the impregnation of the titania surface by Cu species supplied from various copper salts in an aqueous solution and the subsequent heating at 500 °C in Ar. The following precursors were used as a source of Cu: CuSO₄, CuNO₃ or Cu(CH₃COO)₂. Cu doping was performed for raw TiO₂ after a hydrothermal process with and without NH₄OH addition. The obtained results indicate that Cu species were deposited on the titania surface defects in the case of reduced TiO₂, but on the TiO₂ without NH₄OH modification, Cu species were attached through the titania adsorbed hydroxyl groups. Cu doping on TiO₂ increased the absorption of light in the visible range. Rapid inactivation of E. coli within 30 min was obtained for the ammonia-reduced TiO₂ heated at 500 °C and TiO₂ doped with Cu from CuSO₄ solution. Photocatalytic deactivation of S. epidermidis was greatly enhanced through Cu doping on TiO₂. Impregnation of TiO₂ with CuSO₄ was the most effective for inactivation of both E. coli and S. epidermidis.     

Tree-Code Based Improvement of Computational Performance of the X-ray-Matter-Interaction Simulation Tool XMDYN

In this work, we report on incorporating for the first time tree-algorithm based solvers into the molecular dynamics code, XMDYN. XMDYN was developed to describe the interaction of ultrafast X-ray pulses with atomic assemblies. It is also a part of the simulation platform, SIMEX, developed for computational single-particle imaging studies at the SPB/SFX instrument of the European XFEL facility. In order to improve the XMDYN performance, we incorporated the existing tree-algorithm based Coulomb solver, PEPC, into the code, and developed a dedicated tree-algorithm based secondary ionization solver, now also included in the XMDYN code. These extensions enable computationally efficient simulations of X-ray irradiated large atomic assemblies, e.g., large protein systems or viruses that are of strong interest for ultrafast X-ray science. The XMDYN-based preparatory simulations can now guide future single-particle-imaging experiments at the free-electron-laser facility, EuXFEL.     

Evaluation of Polycyclic Aromatic Hydrocarbons in Smoked Cheeses Made in Poland by HPLC Method

Smoked cheeses are particularly popular among consumers for their flavor and aroma. Of interest, therefore, is the health aspect related to the likelihood of polycyclic aromatic hydrocarbons (PAHs), which are known carcinogens found in smoked products. Thus, the purpose of this study was to evaluate the occurrence of 15 polycyclic aromatic hydrocarbons (PAHs) in smoked and non-smoked cheeses purchased in Poland to monitor their safety. The level of selected PAHs in cheese samples was determined using the HPLC-DAD-FLD method. Most of the cheeses tested met the maximum level of benzo[a]pyrene (2 μg/kg) and the sum of benz[a]anthracene, chrysene, benzo[b]fluoranthene and benzo[a]pyrene (12 μg/kg) established for these products. However, all the cheeses studied in this work had relatively low amounts of the sum of these compounds compared to the information available in the cheese literature, ranging from <LOD to 24.5 μg/kg. This amount does not pose a health risk to consumers. The predominant PAHs found were naphthalene, phenanthrene, fluorene and acenaphthene. Benzo[a]pyrene, the marker compound representing carcinogenic PAHs, was found in 100% and 0% of Polish smoked and non-smoked cheeses, respectively. Although there are currently no regulations for smoked cheeses and maximum concentrations of PAHs in this type of food product, control of PAHs content in cheeses is important due to the mutagenic and carcinogenic potential of these chemicals.     

Structure,tautomerism, and features of 1-(5-acetyl-2,4-dihydroxyphenyl)-3-(furan-2-yl)prop-2-en-1-one (FC) and 1,1′-(4,6-dihydroxybenzene-1,3-diyl)bis[3-(furan-2-yl)prop-2-en-1-one] (FDC)

Quantum chemistry studies of various tautomeric/rotameric forms of the furanyl analogues of acetyl dihydroxychalcone (FC) and dihydroxydichalcone (FDC) have shown that the thermodynamically most stable molecules are planar. In the crystalline solid phase, both molecules are more (FDC) or less (FC) non-planar. Two relatively strong intramolecular H-bonds, whose existence is evidenced by X-ray, computational, and spectral investigations, stabilize the planar geometry and influence the features of the lowest energy tautomers/rotamers of both compounds. Extending to the visible region, the electronic absorption of FC and FDC is accompanied by an intramolecular electron density shift, a property that could have analytical implications.