Observation of muon neutrino disappearance with the MINOS detectors in the NuMI neutrino beam

This Letter reports results from the MINOS experiment based on its initial exposure to neutrinos from the Fermilab NuMI beam. The rates and energy spectra of charged current nu(mu) interactions are compared in two detectors located along the beam axis at distances of 1 and 735 km. With 1.27 x 10(20) 120 GeV protons incident on the NuMI target, 215 events with energies below 30 GeV are observed at the Far Detector, compared to an expectation of 336+/-14 events. The data are consistent with nu(mu) disappearance via oscillations with |Delta(m)2/32|=2.74 +0.44/-0.26 x10(-3)eV(2) and sin(2)(2theta(23))>0.87 (68% C.L.).     

Annulation of primary amines to piperazines and diazaspirocycles utilizing alpha-methyl benzyl resin

The microwave-assisted solid-phase synthesis of piperazines, 3,9-diazaspiro[5.5]undecanes and 2,9-diazaspiro[5.5]undecanes is reported. The synthesis relies on the direct annulation of primary amines with resin-bound bismesylates. Critical to the success of this chemistry was the development of alpha-methyl benzyl carbamate resin linker. This resin permits the cleavage of the heterocycles under mildly acidic conditions, free of contaminating linker-derived N-alkylated byproducts.     

Scaffold hopping using clique detection applied to reduced graphs

Similarity-based methods for virtual screening are widely used. However, conventional searching using 2D chemical fingerprints or 2D graphs may retrieve only compounds which are structurally very similar to the original target molecule. Of particular current interest then is scaffold hopping, that is, the ability to identify molecules that belong to different chemical series but which could form the same interactions with a receptor. Reduced graphs provide summary representations of chemical structures and, therefore, offer the potential to retrieve compounds that are similar in terms of their gross features rather than at the atom-bond level. Using only a fingerprint representation of such graphs, we have previously shown that actives retrieved were more diverse than those found using Daylight fingerprints. Maximum common substructures give an intuitively reasonable view of the similarity between two molecules. However, their calculation using graph-matching techniques is too time-consuming for use in practical similarity searching in larger data sets. In this work, we exploit the low cardinality of the reduced graph in graph-based similarity searching. We reinterpret the reduced graph as a fully connected graph using the bond-distance information of the original graph. We describe searches, using both the maximum common induced subgraph and maximum common edge subgraph formulations, on the fully connected reduced graphs and compare the results with those obtained using both conventional chemical and reduced graph fingerprints. We show that graph matching using fully connected reduced graphs is an effective retrieval method and that the actives retrieved are likely to be topologically different from those retrieved using conventional 2D methods.     

Search for lepton-flavor-violating decays of the neutral kaon

The Fermilab KTeV experiment has searched for lepton-flavor-violating decays of the K(L) meson in three decay modes. We observe no events in the signal region for any of the modes studied, and we set the following upper limits for their branching ratios at the 90% C.L.: BR(K(L) --> pi(0) micro(+/-) e(-/+)) <7.6 x 10(-11); BR(K(L) --> pi(0)pi(0) micro(+/-) e(-/+)) <1.7 x 10(-10); BR(pi(0) --> micro(+/-) e(-/+)) <3.6 x 10(-10). This result represents a factor of 82 improvement in the branching ratio limit for K(L) --> pi(0) micro(+/-) e(-/+) and is the first reported limit for K(L) --> pi(0)pi(0) micro(+/-) e(-/+).     

Synthetic mimicking of plant oils and comparison with naturally grown products in polyurethane synthesis

The use of plant oils as industrial feedstocks can often be hampered by their lack of optimization towards a particular process, as well as their development being risky; growing suitable volumes of crops to test can take up to five years. To circumvent this, we aimed to discover a method that would mimic plant oil profiles in the laboratory, and show that they exhibited similar properties to the naturally grown plant oils in a given process. Using the synthesis of polyurethanes as an example, we have synthesized six different polymers and demonstrated that plant oils will produce polymers with similar physical properties to those oils mimicked in the laboratory. The use of this mimicking process can be extended to other types of polymers to obtain a method for predicting the properties of a given material based on the plant oil composition of a crop before it is grown in bulk.     

Self-assembly in complex mixed surfactant solutions: the impact of dodecyl triethylene glycol on dihexadecyl dimethyl ammonium bromide

The impact of the nonionic surfactant, dodecyl triethyleneglycol ether (C(12)E(3)) on the solution microstructure of the dialkyl chain cationic surfactant, dihexadecyl dimethyl ammonium bromide, (DHDAB) has been investigated. The variation in solution microstructure has been studied using a combination of small angle neutron scattering, ultra small angle neutron scattering, optical texture and photon correlation spectroscopy. At low surfactant concentrations (1.5 mM) the microstructure takes the form of bilamellar vesicles (BLV) for compositions containing less than 20 mol % of added C(12)E(3). Multilamellar vesicles (MLV) are the predominant microstructure for solutions richer in composition than 20 mol % C(12)E(3). At more than 80 mol % C(12)E(3), the solution microstructure reverts to that of a lamellar phase dispersion consistent with studies on the pure nonionic surfactant. At higher concentrations (60 mM) a wide continuous L beta phase region is observed for compositions in the range 20 to 80 mol % C(12)E(3). The fine details of the phase diagram were obtained from quantitative analysis of the SANS data using a well-established lamellar membrane model. Irrespective of the nonionic content, the bilayers are in general highly rigid, consistent with those stabilized by charge interactions. Furthermore estimates of the product of membrane moduli (compressibility and bending modulus) indicate that the different phase regions have very different membrane properties, however the magnitude of the variations observed are not predicted using existing theoretical treatments.     

Diruthenium(II,III) bis(tetramethyl-1,3-benzenedipropionate) as a novel catalyst for tert-butyl hydroperoxide oxygenation

The reaction of Ru2(OAc)4Cl with 2.2 equiv of H2esp (esp = alpha,alpha,alpha',alpha'-tetramethyl-1,3-benzenedipropionate) resulted in a new compound, Ru2(esp)2Cl (1), that is soluble in organic media. 1 is an active catalyst for the oxygenation of organic sulfides by tert-butyl hydroperoxide (TBHP) in both an acetonitrile solution or neat (solvent-free) conditions. Solvent-free reactions display the quantitative utility of TBHP and hence excellent chemical selectivity for sulfoxide formation.     

Carbon-carbon bond forming reactions with substrates absorbed non-covalently on a cellulose chromatography paper support

Reactions and purifications, including carbon-carbon bond forming reactions, can be carried out on a cellulose support on which the substrates are non-covalently absorbed.     

Retention of histidine-containing peptides on a nickel affinity column

The retention of histidine-containing peptides in immobilized metal-affinity chromatography is studied using several hundred modeled peptides. Retention is driven primarily by the number of histidine residues; however, the amino acid composition in the immediate vicinity plays a significant role. Specifically, the arginine and tryptophan content has to be taken into consideration. During the course of this study, an alternative tag that can be used similarly to a polyhistidine tag is discovered.     

Ring-Closing Metathesis in Carbohydrate Annulation

Even eight-membered rings (such as in 2 ) can be formed by ring-closing metathesis of glucose derivatives such as 1 . Enantiomerically pure tricyclic spiro compounds can also be prepared.