New Aquapentachlorochromate(III) Compounds: K2[CrCl5(H2O)] and (NH4)2[CrCl5(H2O)]

Synthesis and crystal structures of two new compounds, K₂[CrCl₅(H₂O)] ( I ) and (NH₄)₂[CrCl₅(H₂O)] ( II ) are reported. Both compounds were prepared from chromium(VI) salts by two different methods and reaction pathways of these syntheses are suggested. The crystal structures of these two aquapentachlorochromates(III) have been determined from three dimensional X‐ray data collected at low temperature, 173 K. The two structures are isomorphous and their unit cell dimensions are quite similar. They are orthorhombic, space groups Pnma, with Z = 4. Both structures are composed of [CrCl₅(H₂O)]^2? units held together by the counterion framework. The coordination around the chromium ion deviates from a regular octahedron due to the shorter equatorial chromium‐oxygen bond.     

The secret of dimethyl sulfoxide-water mixtures. A quantum chemical study of 1DMSO-nwater clusters

DMSO-water mixtures exhibit a marked freezing point depression, reaching close to 60 K at n(DMSO) = 0.33. The phase diagram indicates that stable DMSO-water clusters may be responsible for this phenomenon. Using time-independent quantum chemical methods, we investigate possible candidates for stable supermolecules at mole fractions n(DMSO) = 0.25 and 0.33. The model clusters are built by adding various numbers of water molecules to a single DMSO molecule. Structures and interaction energetics are discussed in the light of experimental and theoretical results from the literature. A comparison with results from molecular dynamics simulations is of particular interest. Our optimized structures are spatially very different from those previously identified through MD simulations. To identify the structural patterns characterizing the clusters, we classify them on the basis of hydrogen-acceptor interactions. These are well separated on an interaction energy scale. For the hydrophobic interactions of the methyl groups with water, attractive interactions of up to 8 kJ/mol are found. In forming clusters corresponding to a range of different mole fractions, up to four water molecules are added to each DMSO molecule. This corresponds to a rough local model of solvation. Examination of the trends in the interactions indicates that the methyl-water interaction becomes more important upon solvation. Finally, we investigate how the clusters interact and attempt to explain which role is played by the various structures and their intercluster interaction modes in the freezing behavior of DMSO-water.     

Oligomeric carbon and siloxane series observed by matrix-assisted laser desorption/ionisation and laser desorption/ionisation mass spectrometry during the analysis of soot formed in fuel-rich flames

Oligomeric carbon and siloxane series have been observed by matrix-assisted laser desorption/ionisation mass spectrometry (MALDI-MS), during the analysis of the dichloromethane (DCM)-soluble fractions of condensable material recovered from fuel-rich flames. Laser desorption (LD) spectra showed a pattern of oligomeric dimethyl-siloxane structures with a spacing of 74 u. The siloxane series appears to have originated as contamination of samples by silicone oil used to lubricate connections of polymer tubing. This was confirmed by extracting silicone tubing and silicone grease with DCM followed by MALDI-MS analysis. A series of peaks with a mass spacing of 24 u was also observed, superimposed on the continuum of unresolved organic ions. This oligomeric series appears to correspond to polycyclic aromatics separated by (mainly) ethylene bridges. Thus LD-MS appears to have revealed a series of soot precursors, intermediate between polycyclic aromatics and particulate soot, which was not detected by MALDI-MS. More detailed work is necessary to define these species with precision.     

Spatially resolved gas phase composition measurements in supersonic flows using tunable diode laser absorption spectroscopy

We used a tunable diode laser absorption spectrometer to follow the condensation of D(2)O in a supersonic Laval nozzle. We measured both the concentration of the condensible vapor and the spectroscopic temperature as a function of position and compared the results to those inferred from static pressure measurements. Upstream and in the early stages of condensation, the quantitative agreement between the different experimental techniques is good. Far downstream, the spectroscopic results predict a lower gas phase concentration, a higher condensate mass fraction, and a higher temperature than the pressure measurements. The difference between the two measurement techniques is consistent with a slight compression of the boundary layers along the nozzle walls during condensation.     

Intermolecular interactions and geometry of non-rigid molecules in weak crystalline complexes: Vibrational spectra of 4,4′-dinitrobiphenyl complexes with biphenyl,biphenyl derivatives and p-terphenyl

Raman spectroscopy is used to study the complexes of 4,4′-dinitrobiphenyl with biphenyl, 4-hydroxybiphenyl, 4-bromobiphenyl and p-terphenyl, which crystallize in a highly unusual geometry. Their phonon spectra at 125 K and 18 K are compared and the effect of isotopic substitution of biphenyl on the phonon spectra of its complex is examined. Internal vibrations of the components in the crystalline complex are compared with those observed in the pure crystals of the components. The results from both phonon and intramolecular vibration studies show that these complexes form in fixed stoichiometries, are governed by geometrical factors, and are stabilized primarily by van der Waals interaction, although other kinds of interactions may provide additional stabilization. The 4,4′-dinitrobiphenyl molecule as well as biphenyl and p-terphenyl are centrosymmetric and remain so when the complexes are cooled from room temperature to 18 K. For biphenyl complex, this conclusion is supported by the observed IR spectra which show mutual exclusion between IR-active and Raman active vibrations. Crystal splitting is observed on the 410 cm^?1 vibration of 4,4′-dinitrobiphenyl. This splitting is attributed to the presence of more than one 4,4′-dinitrobiphenyl molecules in the complex unit.     

Chemoenzymatic synthesis of glycopeptides with PglB, a bacterial oligosaccharyl transferase from Campylobacter jejuni

The gram-negative bacterium Campylobacter jejuni has a general N-linked glycosylation pathway encoded by the pgl gene cluster. One of the proteins in this cluster, PgIB, is thought to be the oligosaccharyl transferase due to its significant homology to Stt3p, a subunit of the yeast oligosaccharyl transferase complex. PgIB has been shown to be involved in catalyzing the transfer of an undecaprenyl-linked heptasaccharide to the asparagine side chain of proteins at the Asn-X-Ser/Thr motif. Using a synthetic disaccharide glycan donor (GaINAc-alpha1,3-bacillosamine-pyrophosphate-undecaprenyl) and a peptide acceptor substrate (KDFNVSKA), we can observe the oligosaccharyl transferase activity of PgIB in vitro. Furthermore, the preparation of additional undecaprenyl-linked glycan variants reveals the ability of PgIB to transfer a wide variety of saccharides. With the demonstration of PgIB activity in vitro, fundamental questions surrounding the mechanism of N-linked glycosylation can now be addressed.     

Additivity of theHammett reaction constants ion pairs effect in the polarographic reduction of nitrobenzene and 9,10-anthraquinone derivatives

An attempt has been made to estimate the effect of the subsequent ion pairs formation on the value of theHammett reaction constant measured polarographically. To this purpose, the reduction ofpara-substituted nitrobenzenes and 2-substituted 9,10-anthraquinones was studied at a dropping mercury electrode in N,N-dimethylformamide. The ion pairs reaction constant of substituted nitrobenzene radical anions with tetraethylammonium cations is equal to –1.49 V/ unit. The corresponding reaction constant for the semiquinone—Li⁺ series was estimated to be –0.90 V/ unit. The method of calculation was based on the additivity rule withinHammett's treatment.

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Zur Additivität derHammet'schen Reaktionskonstanten. Paar-Effekte bei der polarographischen Reduktion von Nitrobenzol und 9,10-Anthrachinonderivaten

Zusammenfassung Es wurde eine Abschätzung des Effekts der nachfolgenden Ionenpaarbildung auf den polarographisch bestimmten Wert derHammet'schen Reaktionskonstanten versucht. Dazu wurde die Reduktion vonpara-substituierten Nitrobenzolen und 2-substituierten 9,10-Anthrachinonen an der tropfenden Quecksilberelektrode in N,N-Dimethylformamid untersucht. Die Ionenpaar-Reaktionskonstanten von substituierten Nitrobenzol-Radikalanionen mit Tetraethylammoniumkationen ist gleich –1.49 V/-Einheiten. Die ents prechende Reaktionskonstante für die Semichinon-Li⁺ Serie wurde mit –0.9 V/-Einheiten abgeschätzt. Die Berechnungsmethode basiert auf der Additivitätsregel derHammet'schen Reaktionskonstanten.

     

Conformational and receptor-binding properties of the insect neuropeptide proctolin and its analogues

Summary Proctolin (Arg-Tyr-Leu-Pro-Thr) was the first insect neuropeptide to be chemically characterised. It plays an essential role in insect neurophysiology and is involved in muscular contraction and neuromodulation. Elements of secondary structure in solution have been studied by comparing data obtained from NMR and molecular dynamics simulations. Different secondary structural requirements are associated with agonist and antagonist activities. A favoured conformation of proctolin has an inverse -turn, comprising an intramolecular hydrogen bond near the C-terminal end between Thr NH and Leu CO. Antagonists have a more compact structure resembling a paperclip loop, containing an intramolecular hydrogen bond between Tyr NH and Pro CO, possibly stabilised by a salt bridge between the N- and C-terminal groups. A cyclic analogue retains antagonist activity and resembles a -bulge loop, also comprising intramolecular hydrogen bonds between Tyr NH and Pro CO and Thr CO. These models may offer feasible starting points for designing novel compounds with proctolinergic activity.     

NMR investigations of Co(III) coordination compounds oriented in a dilute lyotropic liquid crystal

A swollen lamellar phase, based on sodium dodecyl sulfate, pentanol and NaBr brine, was examined by means of NMR spectroscopy of isotopes with quadrupolar characteristics, namely 2H, 17O, 23Na and 81Br, present at natural abundance. Such a dilute lyotropic liquid crystal was capable of inducing a preferential orientation of the cobalt coordination compounds [Co(en)3]3+ and Co(acac)3, the 59Co NMR signals of which displayed quadrupolar splittings. Moreover, it imparted alignment in the magnetic field to the organocobaloxime [ClCD2Co(Hdmg)2H2O], as shown by the quadrupolar splitting of the deuterium of the axial ligand.