Synthesis and structure of mycolactone E isolated from frog mycobacterium

The structure of mycolactone E, isolated from the frog pathogen Mycobacterium liflandii, was established via organic synthesis. Within the mycolactone family of metabolites, a structural variation has been seen only at the unsaturated fatty acid moiety thus far, and mycolactone E follows this observation. Interestingly, the absolute configuration of its unsaturated fatty acid matches that of the mycolactones from human mycobacteria, rather than the structurally more closely related mycolactone F from fish mycobacteria.     

Quantitation of a PEGylated protein in monkey serum by UHPLC-HRMS using a surrogate disulfide-containing peptide: A new approach to bioanalysis and in vivo stability evaluation of disulfide-rich protein therapeutics

To quantify a therapeutic PEGylated protein in monkey serum as well as to monitor its potential in vivo instability and methionine oxidation, a novel ultra high performance liquid chromatography-high resolution mass spectrometric (UHPLC-HRMS) assay was developed using a surrogate disulfide-containing peptide, DCP(SS), and a confirmatory peptide, CP, a disulfide-free peptide. DCP(SS) was obtained by eliminating the step of reduction/alkylation before trypsin digestion. It contains an intact disulfide linkage between two peptide sequences that are essential for drug function but susceptible to potential in vivo cleavages. HRMS-based single ion monitoring (SIM) on a Q Exactive™ mass spectrometer was employed to improve assay specificity and sensitivity for DCP(SS) due to its poor fragmentation and low sensitivity with SRM detection. The assay has been validated for the protein drug in monkey serum using both surrogate peptides with excellent accuracy (within ±4.4%Dev) and precision (within 7.5%CV) with a lower limit of quantitation (LLOQ) at 10 ng mL⁻¹. The protein concentrations in monkey serum obtained from the DCP(SS)-based assay not only provided important pharmacokinetic parameters, but also confirmed in vivo stability of the peptide regions of interest by comparing drug concentrations with those obtained from the CP-based assay or from a ligand-binding assay (LBA). Furthermore, UHPLC-HRMS allowed simultaneous monitoring of the oxidized forms of both surrogate peptides to evaluate potential ex vivo/in vivo oxidation of one methionine present in each of both surrogate peptides. To the best of our knowledge, this is the first report of using a surrogate disulfide-containing peptide for LC-MS bioanalysis of a therapeutic protein.     

Investigation of the “true” extraction recovery of analytes from multiple types of tissues and its impact on tissue bioanalysis using two model compounds

LC-MS/MS has been widely applied to the quantitative analysis of tissue samples. However, one key remaining issue is that the extraction recovery of analyte from spiked tissue calibration standard and quality control samples (QCs) may not accurately represent the “true” recovery of analyte from incurred tissue samples. This may affect the accuracy of LC-MS/MS tissue bioanalysis. Here, we investigated whether the recovery determined using tissue QCs by LC-MS/MS can accurately represent the “true” recovery from incurred tissue samples using two model compounds: BMS-986104, a S1P₁ receptor modulator drug candidate, and its phosphate metabolite, BMS-986104-P. We first developed a novel acid and surfactant assisted protein precipitation method for the extraction of BMS-986104 and BMS-986104-P from rat tissues, and determined their recoveries using tissue QCs by LC-MS/MS. We then used radioactive incurred samples from rats dosed with ³H-labeled BMS-986104 to determine the absolute total radioactivity recovery in six different tissues. The recoveries determined using tissue QCs and incurred samples matched with each other very well. The results demonstrated that, in this assay, tissue QCs accurately represented the incurred tissue samples to determine the “true” recovery, and LC-MS/MS assay was accurate for tissue bioanalysis. Another aspect we investigated is how the tissue QCs should be prepared to better represent the incurred tissue samples. We compared two different QC preparation methods (analyte spiked in tissue homogenates or in intact tissues) and demonstrated that the two methods had no significant difference when a good sample preparation was in place. The developed assay showed excellent accuracy and precision, and was successfully applied to the quantitative determination of BMS-986104 and BMS-986104-P in tissues in a rat toxicology study.     

Light backscattering as an indirect method for detecting emulsion inversion

Many phenomena take place during different types of emulsion inversions, particularly a change in interface curvature and drop size, which could be detected by backward light scattering. Monitoring the backscattering signal allows us to detect the emulsion inversion in three main cases, one transitional and two catastrophic types. The backscattering data could give some clue as to emulsion morphology, which is not available from conductivity measurements.     

The EACN scale for oil classification revisited thanks to fish diagrams

The phase behavior of C(10)E(4)-oil-water systems at constant o/w ratio and variable temperature (fish diagram) has been investigated for several homologous oil families. The temperature T( *) and surfactant concentration C( *) at the critical point were determined for 10 n-alkanes varying from C(6) to C(28) as well as for a series of alkylcyclohexanes and alkylbenzenes. On the basis of T( *), equivalent alkane carbon numbers (EACN) were assigned to nonlinear alkanes, alkylbenzenes, and alkylcyclohexanes. The consistency of the method was shown by corroborating that the EACN values of oils previously investigated with other C(i)E(j) (dibutyl ether, squalane, isopropyl myristate, and dodecylbenzene) are the same when determined with C(10)E(4). The fact that two oils of different nature but with the same EACN (i.e., the same T( *)) do not exhibit the same C( *) is discussed in terms of monomeric solubility of the surfactant in the oil (CMC(oil)).     

A sensitivity analysis to assess the completion time deviation for multi-purpose machines facing demand uncertainty

This paper addresses multi-purpose machine configuration in an uncertain context through sensitivity analysis. The so-called configuration is the machine??s ability to process products, and the uncertain context is modelled as a demand variation affecting the forecast demand. Given a configuration, this work aims at assessing the completion time deviation when the workshop demand is subject to perturbation. Such quantitative information can be used in a robustness approach for selecting the most appropriate configuration. To do so, the configuration impact on the completion time value that can be reached by solving the attached scheduling problem is first investigated. Then, the completion time deviation is written as a piecewise linear function of the magnitude of demand variation. The proposed approach, which is based on the solution of a set of linear programs, is illustrated through a detailed example. It is shown to be polynomial, and fast enough for addressing real-world instances. Finally, how to compare two configurations on the basis of completion time deviation in an uncertain context is demonstrated.     

Synthesis and biological investigation of the β-thiolactone and β-lactam analogs of tetrahydrolipstatin

The synthesis of β-thiolactone and β-lactam analogs of tetrahydrolipstatin is described from a common late-stage β-lactone derivative. These analogs, and a cis-disubstituted β-lactone analog of tetrahydrolipstatin, were screened for activity against porcine pancreatic lipase and for inhibition of cell growth of a panel of four human cancer lines.     

Aqueous mixtures of di-n-decyldimethylammonium chloride/polyoxyethylene alkyl ether: dramatic influence of tail/tail and head/head interactions on co-micellization and biocidal activity

Mixed aggregate formation and synergistic interactions of binary surfactant mixtures of di-n-decyldimethylammonium chloride, [DiC(10)][Cl], with polyoxyethylene alkyl ethers, C(i)E(j) (i=10, 12, j=4, 6, 8), have been investigated for various [DiC(10)][Cl]/C(i)E(j) ratios. The critical aggregation concentration of the binary mixtures has been determined by tensiometry, and the aggregate characteristics (i.e., size and composition, free ammonium concentration) have been estimated using the pulsed field gradient NMR spectroscopy and a [DiC(10)]-selective electrode. Diffusion coefficient measurements of micelles confirmed the synergistic interaction between the surfactants. It is thus shown that the formation of surface monolayers and mixed aggregates from [DiC(10)][Cl]/C(10)E(j) mixtures is driven by both tail/tail and head/head interactions, whereas [DiC(10)][Cl]/C(12)E(j) co-aggregation is mainly driven by tail/tail interactions. As a consequence, the co-aggregation phenomenon notably influences the biocidal activity of [DiC(10)][Cl] on the Candida albicans fungi. In the presence of C(12)E(j), the biocidal activity of the ammonium salt is inhibited due to the trapping of the cationic surfactants in the mixed aggregates, whereas in the presence of C(10)E(j), the biocidal activity of the surfactant mixture is maintained. The mode of action is also confirmed by a faster increase in the zeta potential of a C. albicans suspension in the presence of [DiC(10)][Cl]/C(10)E(8) than in the presence of [DiC(10)][Cl]/C(12)E(8). Therefore, a judicious adjustment of the alkyl (i) and polyoxyethylene (j) chain lengths of C(i)E(j) avoids its antagonistic effect on the biocidal activity of [DiC(10)][Cl].     

The behavior of oxygen as a collision-induced dissociation target gas

The unusual and unique ability of O2 as target gas in kV collision-induced dissociations, to enhance a specific fragmentation of a mass selected ion, has been examined in detail. The affected dissociations studied were the loss of CH3* from CH3CH+X (X = OH, CH3, NH2, SH); CH3* and C1* loss from CH3C+(C1)CH3; C2H5* loss from CH3CH2CH+X (X = OH and NH2); H* loss from +CH2OH and +CH2NH2; O loss from 1,2-, 1,3-, and 1,4-C6H4(NO2)2+*; CH3NO+*; C6HsNO2+*; C5H5NO+* (pyridine N-oxide); 3- and 4-CH3C5H4NO+*. A general explanation of the phenomena, which was semiquantitatively tested in the present work, can be summarized as follows: the ion - O2 encounter excites the target molecules to their 3sigma(g)- state which resonantly return this energy to electronic state(s) in the ion. The excited ion now contains a sharp excess of a narrow range of internal energies, thus significantly and only enhancing fragmentations whose activation energies lie within this small energy manifold.