Elastic scattering from a sapphire microsphere placed on a silica optical fiber coupler: Possible applications to biosensing

Elastic light scattering is performed in the original band of optical fiber communication at 1300 nm for a 500 μm sapphire microsphere placed on a silica optical fiber half coupler. The morphology dependent resonances (MDRs) are observed in the transverse magnetically (TM) polarized and transverse electrically (TE) polarized 0^° transmission and 90^° elastic scattering obtained from the sapphire microsphere. The TE and TM MDRs can be detected selectively with the use of a Glan polarizer. The TE and TM polarization selectivity provides the ability to select relative MDR to BG levels. The TM polarization provides higher MDR signal to background ratio (SBR) and is suitable for optical monitoring, biological sensing or any other optoelectronic application that requires a high resolution optical filter. The polar angular mode spacing of 0.36 nm of the resonances correlates well with the optical size of the sapphire microsphere. The autocorrelation of the 90^° elastic scattering spectra also shows peaks at 0.36 nm. The spectral linewidths of the resonances are on the order of 0.1 nm, which corresponds to quality factors on the order of 10⁴. A sapphire sphere with a radius of 500 μm and relative refractive index of 1.31, resonances will red-shift by 1.01 nm (0.077%). This shift is on the order of 10 linewidths, making sapphire biophotonic sensors an interesting alternative to silica biophotonic sensors.     

Kinetic evaluation of an i.v. bolus of MR contrast media

Currently, it is assumed that the pharmacokinetic properties of the first minutes of an I.V. MR contrast media bolus are similar to those of an i.v. iodinated contrast media bolus used in CT. Correct timing of an MRA examination is crucial for obtaining sufficient arterial contrast. This study sought to evaluate the temporal change of arterial signal intensity within 150 s after i.v. bolus injection of Gd-DTPA. Thirty consecutive patients (14 women/16 men; mean age: 51 +/- 11 years) were prospectively examined with a 1.0 Tesla clinical scanner. A single axial slice was acquired in 1.25 sec with manufacturer provided gradient echo sequence through the aorta at the level of the renal arteries. Investigation was started simultaneously to the application of contrast media (0.1 mmol/kg bodyweight Gd-DTPA at three different rates 2 mL/sec, 3 mL/sec and 4 mL/sec) and repeated for 2.5 min. An additional echo Doppler examination excluded patients with any cardiac disorders. Maximum signal (1300% increase compared to the basic value) in the aorta was achieved 20 +/- 6 sec after start of bolus injection. Then a plateau phase was maintained for the remaining investigation time (2.5 min). No significant difference was shown for different injection rates. After a bolus injection of Gd-DTPA the arterial contrast remains on a high level for at least 2 min. However, correct timing of the bolus arrival is still crucial to discriminate arteries and veins. An injection rate between 2 mL/sec and 4 mL/sec has no influence on early contrast media dynamics.     

Directed evolution of high-affinity antibody mimics using mRNA display

We constructed a library of >10(12) unique, covalently coupled mRNA-protein molecules by randomizing three exposed loops of an immunoglobulin-like protein, the tenth fibronectin type III domain (10Fn3). The antibody mimics that bound TNF-alpha were isolated from the library using mRNA display. Ten rounds of selection produced 10Fn3 variants that bound TNF-alpha with dissociation constants (K(d)) between 1 and 24 nM. After affinity maturation, the lowest K(d) measured was 20 pM. Selected antibody mimics were shown to capture TNF-alpha when immobilized in a protein microarray. 10Fn3-based scaffold libraries and mRNA-display allow the isolation of high-affinity, specific antigen binding proteins; potential applications of such binding proteins include diagnostic protein microarrays and protein therapeutics.     

Biomonitoring of trace elements in muscle and liver tissue of freshwater fish

The aim of this study was to investigate the potential impact of a coal combustion power plant in the northern part of Vietnam with regard to elemental pollution on the surrounding environment. Freshwater fishes (Clarias fucus) were sampled both at a site exposed to the emissions of the power plant and at a reference site seemingly free from industrial activities. The elemental concentrations in muscle and liver tissue were analyzed using total-reflection X-ray fluorescence and atomic absorption spectroscopy. A comparison of muscle tissue with International Standards (Food and Agricultural Organization) showed that the fishes from both sites did not constitute any health risk for human consumers with regard to the elements Cu, Zn, As, Se, Cd, Pb and Cr. Generally, concentration differences between sites were found to be small in the edible tissue. Compared to the muscle tissue, concentrations of metals were elevated in the liver. The elemental concentrations of P, S, K, Ca, Fe, Mn, Zn and Pb were significantly higher in the hepatic tissue from the exposed site, suggesting—together with measurements of airborne pollutants—emissions from the power plant as a probable source of these elements.     

Fast counter-electroosmotic capillary electrophoresis–time-of-flight mass spectrometry of hyaluronan oligosaccharides

Fast capillary electrophoresis–mass spectrometry measurements under counter-electroosmotic analyte migration conditions are presented. Efficient separations of a homologous series of six hyaluronan oligosaccharides (comprising 1–6 hyalobiuronic acid moieties) could be completed in 65 s. Separations were achieved in short-length fused silica capillaries under high electric field strengths of up to 1.25 kV·cm⁻¹. Capillary inner diameters ranging from 5 to 50 μm were investigated, resulting in an optimal value of 15 μm. The influence of capillary dimensions and buffer composition on separation efficiency and sensitivity are discussed. Optimal separations were achieved using a 28 cm × 15 μm capillary, a separation high voltage of 35 kV, a background electrolyte of 25 mM ammonium acetate adjusted to pH 8.5, and negative ionization mode. The optimized method was successfully applied to a bovine testicular hyaluronidase digest of hyaluronan. Only minimal sample pretreatment for protein-containing samples is required. The simple manual injection procedure and fast separations allow for a sample throughput of 35 samples per hour.     

4,5‐Pyrenocyanine—Just Another Phthalocyanine? A STM and 2D WAXS Study

Pyrene‐fused tetraazaporphyrins were synthesized from pyrene‐4,5‐dicarbonitrile precursors using a recently reported procedure as the key step for the asymmetric substitution of pyrene. Metal‐free, zinc‐ and lead‐centered pyrenocyanines were obtained and their optical properties as well as their molecular assembly in the solution and bulk phases and at the liquid/solid interface were studied. The characteristic Q‐band appears broadened, most likely owing to distortion of the molecule introduced by the steric demand of the angularly extended aromatic residue. The angular annulation does not bathochromically shift the Q‐band as far as would have been expected for the linear case. Peripheral substitution with linear and branched alkoxy chains affords solubility of the compounds in organic solvents. The influence of the distinct steric demand of the substituents on aggregation was investigated for metal‐centered pyrenocyanines by using temperature‐dependent ¹H NMR and UV/Vis spectroscopy. The self‐assembly at the liquid/solid interface was studied using scanning tunneling microscopy. The alkoxy substituents facilitate the anchoring of these slightly non‐planar molecules on the surface of graphite. Pyrenocyanine molecules form well‐ordered 2D arrays in which the molecules are arranged in rows. The angular annulation of the pyrenocyanine residue leads to characteristic adsorption behavior at the liquid/solid interface, in which the molecules adsorb in two different adsorption geometries. The alkoxy side‐chains give rise to a discotic columnar superstructure and induce distinct thermotropic behavior. Dependent on the steric demand of the branched chains and the central metal atom, the molecules are rotated with respect to each other to form helical organization.     

Pre-organization of the core structure of E-selectin antagonists

A new class of N-acetyl-D-glucosamine (GlcNAc) mimics for E-selectin antagonists was designed and synthesized. The mimic consists of a cyclohexane ring substituted with alkyl substituents adjacent to the linking position of the fucose moiety. Incorporation into E-selectin antagonists led to the test compounds 8 and the 2'-benzoylated analogues 21, which exhibit affinities in the low micromolar range. By using saturation transfer difference (STD)-NMR it could be shown that the increase in affinity does not result from an additional hydrophobic contact of the alkyl substituent with the target protein E-selectin, but rather from a steric effect stabilizing the antagonist in its bioactive conformation. The loss of affinity found for antagonists 10 and 35 containing a methyl substituent in a remote position (and therefore unable to support to the stabilization of the core) further supports this hypothesis. Finally, when a GlcNAc mimetic containing two methyl substituents (52 and 53) was used, in which one methyl was positioned adjacent to the fucose linking position and the other was in a remote position, the affinity was regained.     

Exposure of [MnIII6CrIII]3+ single-molecule magnets to soft X-rays: The effect of the counterions on radiation stability

X-ray absorption spectroscopy studies of the [Mn^III₆Cr^III]³⁺ single-molecule magnet deposited as a microcrystalline layer on gold substrates are presented. The oxidation state of the manganese centers changes from Mn^III to Mn^II due to irradiation with soft X-rays. The influence of the charge-neutralizing anions on the stability of [Mn^III₆Cr^III]³⁺ against soft X-ray exposure is investigated for the different anions tetraphenylborate (BPh₄^?), lactate (C₃H₅O₃^?) and perchlorate (ClO₄^?). The exposure dependence of the radiation-induced reduction process is compared for [Mn^III₆Cr^III]³⁺ with the three different anions.