Cumulative indices for Spectrochima Acta, Part A and Spectrochimica Acta, Part B

This article is an electronic publication in Spectrochimica Acta Electronica (SAE), a section of Spectrochimica Acta, Part B (SAB). The hardcopy text is accompanied by an electronic archive, stored on the SAE homepage at http://www.elsevier.nl/locate/sabe. The archive contains data, index and program files. The main article discusses the bibliographical purpose of the program and data files. A collective index for Spectrochimica Acta for volumes since it was split into Parts A and B, and continuing through 1991 for SAA and 1997 for SAB, is presented in DBF format, along with rudimentary data entry and access software.     

Filtered backprojection for the reconstruction of a high-resolution (4,2)D CH3-NH NOESY spectrum on a 29 kDa protein

Projection-reconstruction (PR) NMR enables rapid collection of multidimensional NMR data. NOESY represents a particularly difficult challenge for currently existing reconstruction algorithms, as it requires the quantitative reconstruction of an unknown number of peaks, at full sensitivity. We have demonstrated the successful application of PR-NMR to NOESY by determining the 4D methyl/amide NOESY spectrum of a 29 kDa protein, human carbonic anhydrase II, from 2D projections, using filtered backprojection for reconstruction. Compared with a 3D control spectrum, all expected peaks were faithfully reconstructed, with correct volumes and with no artifacts. Filtered backprojection thus provides a way to obtain high-resolution 4D NOESY data in the time required for conventional 3D data collection.     

Self-selection in olefin cross-metathesis: the effect of remote functionality

Olefin cross-metathesis (CM) is potentially an attractive method for generating dynamic combinatorial libraries (DCLs). In order for the CM reaction to be useful for DCL production, the course of the reaction and product distribution must be relatively insensitive to functionality remote from the reacting centers. We report on the CM of a series of allyl- and homoallylamides that are strongly dependent on remote functionality. This includes an unusual example of a cis-selective CM. [Reaction: see text]     

A comparison of the role of charge transfer,hyperconjugation, inductive and field interactions in substitutd methyl and silyl substituent effects on benzene π vertical ionization energies

The first two vertical π-ionization energies of MX₃ substituted benzenes as determined by photoelectron spectroscopy are compared with the results of modified CNDO/2 calculations, where M is Si or C and X is H, F, Cl and OCH₃. The major substituent interaction mechanisms of MX₃ are described within the CNDO/2 model. The results for methylorthobenzoate support intramolecular charge transfer stabilization of the benzene radical cation ground state by oxygen lone pair electrons, whereas the dominant interaction of the Si(OCH₃)₃ group is a positive charge stabilising field effect. The first vertical ionization energies of PhSiCl₃ and PhCCl₃ are unexpectedly assigned to ionization from the a′ π orbital rather than the a″ orbital nodal at the substituent site. Carbon-chlorine hyperconjugation is a suggested stabilizing interaction in the PhCCl₃²A′ cation. The shape of the first band in the PE spectrum of phenylsilane is described as a possible example of a pseudo Jahn—Teller effect. Unlike CX₃, SiX₃ substituents except, where X is methoxy, exhibit calculated opposing field and σ-inductive effects.     

The molecular mechanism of stabilization of proteins by TMAO and its ability to counteract the effects of urea

Trimethylamine n-oxide (TMAO) is a naturally occurring osmolyte that stabilizes proteins and offsets the destabilizing effects of urea. To investigate the molecular mechanism of these effects, we have studied the thermodynamics of interaction between TMAO and protein functional groups. The solubilities of a homologous series of cyclic dipeptides were measured by differential refractive index and the dissolution heats were determined calorimetrically as a function of TMAO concentration at 25 degrees C. The transfer free energy of the amide unit (-CONH-) from water to 1 M TMAO is large and positive, indicating an unfavorable interaction between the TMAO solution and the amide unit. This unfavorable interaction is enthalpic in origin. The interaction between TMAO and apolar groups is slightly favorable. The transfer free energy of apolar groups from water to TMAO consists of favorable enthalpic and unfavorable entropic contributions. This is in contrast to the contributions for the interaction between urea and apolar groups. Molecular dynamics simulations were performed to provide a structural framework for the interpretation of these results. The simulations show enhancement of water structure by TMAO in the form of a slight increase in the number of hydrogen bonds per water molecule, stronger water hydrogen bonds, and long-range spatial ordering of the solvent. These findings suggest that TMAO stabilizes proteins via enhancement of water structure, such that interactions with the amide unit are discouraged.     

Unrestricted perfect pairing: the simplest wave-function-based model chemistry beyond mean field

The perfect pairing (PP) approximation from generalized valence bond theory is formulated in an unrestricted fashion for both closed- and open-shell systems using a coupled cluster ansatz. In the model chemistry proposed here, active electron pairs are correlated, but the unpaired or radical electrons remain uncorrelated, leading to a linear number of decoupled cluster amplitudes which can be solved for analytically. The alpha and beta spatial orbitals are variationally optimized independently. This minimal treatment of electron-electron correlation noticeably improves upon symmetry-breaking problems and other pathologies in Hartree-Fock (HF) theory and may be computed using the resolution of the identity approximation at only a factor of several times more effort than HF itself. PP also generally predicts improved molecular structures over HF. This compact, correlated wave function potentially provides a useful starting point for dynamical correlation corrections.     

Computational results on an algorithm for finding all vertices of a polytope

This paper provides answers to several questions raised by V. Klee regarding the efficacy of Mattheiss' algorithm for finding all vertices of convex polytopes. Several results relating to the expected properties of polytopes are given which indicate thatn-polytopes defined by large numbers of constraints are difficult to obtain by random processes, the expected value of the number of vertices of polytope is considerably less than Klee's least upper bound the expected performance of Mattheiss' algorithm is far better than Klee's upper bound would suggest.     

Rotational band crossings in the actinides

In the actinides bothi _13/2 protons andj _15/2 neutrons are close to the Fermi surface. At rapid rotation these high-j particles will unpair and align their orbital angular momentum along the axis of rotation giving rise tos-bands that cross the ground-state band. Coulomb excitation of the odd nuclei ₂₃₇ ⁹³ Np (established up to the 45/2⁺ state) and ₂₃₅ ⁹² U (established up to the 51/2^? state) provides specific information about these band crossings: From the saturating alignment of the odd high-j particle in both nuclei at intermediate rotational frequencies we find the aligned angular momentum of thei _13/2 protons-band to be 6.6? while the corresponding value for thej _15/2 neutrons-band is 5.5?. At more rapid rotation above ?ω=0.18 MeV we observe additional alignment in²³⁵U. This is ascribed to the interaction of the protons-band. From the gradual onset of the additional alignment we deduce that forZ=92 the protons-band interacts strongly with the ground-state band and from a comparison of the actual amount of alignment with the full value of 6.6? we estimate the crossing to occur around ?gw _c ^p =0.25 MeV.     

An examination of the validity of nonequilibrium molecular-dynamics simulation algorithms for arbitrary steady-state flows

Nonlinear-response theory of nonequilibrium molecular-dynamics simulation algorithms is considered under the imposition of an arbitrary steady-state flow field. It is demonstrated that the SLLOD and DOLLS algorithms cannot be used for general flows, although the SLLOD algorithm is rigorous for planar Couette flow. Following the same procedure used to establish SLLOD as the valid algorithm for planar Couette flow [D. J. Evans and E. P. Morriss, Phys. Rev. A 30, 1528 (1984)], it is demonstrated that the p-SLLOD algorithm is valid for arbitrary flows and produces the correct nonlinear response of the viscous pressure tensor.