Dissociative recombination study of Na+ (D2O) in a storage ring

The dissociative recombination of Na(+)(D(2)O) ion has been studied at the heavy-ion storage ring CRYRING (Manne Siegbahn Laboratory, Stockholm University). The cross section has been measured as a function of center-of-mass energy ranging from 1 meV to 0.1 eV and found to have an E(-1.37) dependence. The rate coefficient has been deduced to be (2.3+/-0.32)x10(-7)(T(e)/300)(-0.95+/-0.01) cm(3) s(-1) for T(e)=50-1000 K. The branching ratios have been measured at 0 eV. Of the four energetically accessible dissociation channels, three channels are found to occur although the channel that breaks the weak Na(+)-D(2)O bond is by far dominant.     

Structures and energetics of models for the active site of acetyl-coenzyme a synthase: role of distal and proximal metals in catalysis

Acetyl-coenzyme A (CoA) synthase/carbon monoxide dehydrogenase (ACS/CODH) is a bifunctional enzyme that generates CO from carbon dioxide in the C-cluster of the beta subunit and synthesizes acetyl-CoA from carbon monoxide (CO), CoA, and CH3+ at the active site of the A-cluster in the alpha subunit. On the basis of density functional calculations, we predict that methylation of Nip occurs first, and CO then adds to the NipII-CH3 species to form the intermediate, NipII(CO)(CH3), in which Nip deligates one of its SNid bonds. The CO-insertion/CH3-migration occurs on one metal, the proximal Ni, forming the trigonal planar NipII-acetyl intermediate. The thiolate can bind to NipII and reductively eliminate the thioester. Our calculations disfavor the unprecedented bimetallic CO-insertion/CH3-migration. Ni in the proximal site produces a better catalyst than does Cu.     

Investigating the breakup dynamics of dihydrogen sulfide ions recombining with electrons

This paper presents results concerning measurements of the dissociative recombination (DR) of dihydrogen sulfide ions. In combination with the ion storage ring CRYRING an imaging technique was used to investigate the breakup dynamics of the three-body channel in the DR of 32SD2(+). The two energetically available product channels S(3P) + 2D(2S) and S(1D) + 2D(2S) were both populated, with a branching fraction of the ground-state channel of 0.6(0.1). Information about the angle between the two deuterium atoms upon dissociation was obtained together with information about how the available kinetic energy was distributed between the two light fragments. The recombination cross sections as functions of energy in the interval of 1 meV to 0.3 eV in the center-of-mass frame are presented for 34SH2(+). The thermal rate coefficient for the DR of 34SH2(+) was determined to be (4.8+/-1.0) x 10(-7)(T/300)(-0.72+/-0.1) cm3 s(-1) over this interval.     

Tutorial on estimating the limit of detection using LC-MS analysis,part I: Theoretical review

A large body of literature exists on the limit of detection (LOD), but there is still a lot of confusion about this important validation parameter. This confusion mainly stems from its statistically complex background. The goal of this two-part tutorial is to discuss and clarify the topic of LOD for practitioners. The two main conclusions of this tutorial are: (1) the choice of how to estimate LOD should be based on the purpose of the analytical method that is being validated (e.g. considerable effort should not be made to estimate LOD for a method that is not used for detecting traces in the vicinity of LOD), and (2) LOD estimates are strongly dependent on different assumptions and the approach used, and therefore caution must be exercised when using the estimate or when comparing different estimates.     

A Soret marker band for four-coordinate ferric heme proteins from absorption spectra of isolated Fe(III)-Heme+ and Fe(III)-Heme+(His) ions in vacuo

In this work, we report the absorption spectra in the Soret band region of isolated Fe(III)-heme+ and Fe(III)-heme+(His) ions in vacuo from action spectroscopy. Fe(III)-heme+ refers to iron(III) coordinated by the dianion of protoporphyrin IX. We find that the absorption of the five-coordinate complex is similar to that of pentacoordinate metmyoglobin variants with hydrophobic binding pockets except for an overall blueshift of about 16 nm. In the case of four-coordinate iron(III), the Soret band is similar to that of five-coordinate iron(III) but much narrower. These spectra serve as a benchmark for theoretical modeling and also serve to identify the coordination state of ferric heme proteins. To our knowledge this is the first unequivocal spectroscopic characterization of isolated 4c ferric heme in the gas phase.     

Towards the electrospray ionization mass spectrometry ionization efficiency scale of organic compounds

An approach that allows setting up under predefined ionization conditions a rugged self-consistent quantitative experimental scale of electrospray ionization (ESI) efficiencies of organic compounds is presented. By ESI ionization efficiency (IE) we mean the efficiency of generating gas-phase ions from analyte molecules or ions in the ESI source. The approach is based on measurement of relative ionization efficiency (RIE) of two compounds (B1 and B2) by infusing a solution containing both compounds at known concentrations (C1 and C2) and measuring the mass-spectrometric responses of the protonated forms of the compounds (R1 and R2). The RIE of B1 and B2 is expressed as logRIE(B1, B2) = log[(R1 . C2)/(C1 . R2)]. The relative way of measurement leads to cancellation of many of the factors affecting IE (ESI source design, voltages in the source and ion transport system, solvent composition, flow rates and temperatures of the nebulizing and drying gases). Using this approach an ESI IE scale containing ten compounds (esters and aromatic amines) and spanning over 4 logRIE units has been compiled. The consistency of the scale (the consistency standard deviation of the scale is s = 0.16 logRIE units) was assured by making measurements using different concentration ratios (at least 6-fold concentration ratio range) of the compounds and by making circular validation measurements (the logRIE of any two compounds was checked by measuring both against a third compound).     

The Prevalence of Voice Disorders Among Day Care Center Teachers Compared with Nurses: A Questionnaire and Clinical Study

The acceptance of voice disorders by day care center teachers as an occupational disease is not an invariably established practice. This is due to the lack of reliable evidence of a higher risk for voice disorders in this profession. To find out the risk of voice disorders, an epidemiological study was conducted among day care center teachers (n = 262), using hospital nurses (n = 108) as a control group. Symptoms were charted by a questionnaire. In a clinical examination made by a laryngologist, the voice quality was assessed and the laryngeal status noted. Teachers at day care centers had significantly more voice disorders than did nurses. Vocal nodules and laryngitis findings appeared significantly more frequently among day care center teachers than among those in the control group. The results prove voice disorders to be more frequent among day care center teachers than among control group subjects, and also that the main cause for this may be a higher vocal loading among day care center teachers than among control group subjects.     

Influence of the amino acid composition on the ionization efficiencies of small peptides

Electrospray ionization is widely used to generate gas phase ions from a variety of molecules ranging from small ions to large proteins, while the ionization mechanism is claimed to depend on the size of the molecule. For small molecules, the ionization efficiency, the amount of gas phase ions produced in the electrospray process, depends on the properties of the compound. Here, we show that the amino acid composition also influences the ionization efficiency of the oligopeptide. Additionally, we show that the ionization efficiencies of oligopeptides consisting of more than five amino acid residues are very similar to one another, and assuming equal ionization efficiencies is feasible. Therefore, accurate ionization efficiency predictions are needed mainly for small oligopeptides. For these oligopeptides, the amino acid composition can be used to estimate the ionization efficiency in an easy to use manner.