First-order interaction energies and the basis set truncation effects

The basis set superposition error is investigated in terms of the first-order symmetry adapted perturbation theory (SAPT). The analysis of the first-order SAPT contribution to the interaction energy reveals the origin of the basis set truncation effects at both the one-electron and many-electron levels of approximation. This helps to formulate the necessary conditions which ensure that the calculated interaction energy is free of the basis set superposition contributions. At the level of the one-electron approximation used for both the interacting system and its subsystems a part of the basis set truncation errors can be eliminated by using what is called the dimer-centred basis set. In order to remove all contributions which arise from the symmetrization of the product of wave functions of the subsystems one needs to redefine their reference states. This means that for the interacting system represented by a single HF determinant, the subsystems must be considered at the level of full CI in the orbital space spanned by all occupied orbitals used to describe the dimer. Then, the interaction energy becomes completely free of the basis set superposition contributions. These general considerations are exemplified by calculations of the first-order SAPT interaction energy in helium and H₂ dimers at different levels of approximation for monomers. Also the convergence of the calculated energies to the complete basis set limit is investigated.     

Formation of PAHs and soot platelets: multiconfiguration theoretical study of the key step in the ring closure–radical breeding polyyne‐based mechanism

Polyynes of general formula H? (C?C? )_nH are known to play a significant role in combustion and pyrolysis, possibly being intermediates in the formation of polycyclic aromatic hydrocarbons (PAHs) and soot. They have also been detected in astrophysical investigations. The key step in the polyyne‐based radical breeding mechanism for PAH growth is a cyclization, put forward by Krestinin, which implies disruption of electron couples, plausibly expected to be energy demanding. We explore the electronic features and energy requirements of such a process by quantum mechanical multiconfiguration methods (CASSCF and CASPT2). The features of the wavefunction are analyzed, and the free energy barriers are estimated over a wide range of temperatures, for three molecular models. The initial radical adduct A, generated by H ^. , HC?C ^. (ethynyl), or HC?C? C ^. H₂ ( propargyl ) addition to butadiyne (BD, HC?C? C?CH), undergoes a cyclization with the generation of two new radical centers. However, in most of the cases, one of these new singly occupied sp² orbitals has some overlap with the unpaired electron lobe already existent in A: some sort of bonding builds up and consequently the triradical character cannot be large. Only one model suggests a possible role of the radical breeding mechanism during combustion. Copyright © 2009 John Wiley & Sons, Ltd.     

Same-sign W pair production as a probe of double-parton scattering at the LHC

We study the production of same-sign W boson pairs at the LHC in double parton interactions. Compared with simple factorised double parton distributions (dPDFs), we show that the recently developed dPDFs, GS09, lead to non-trivial kinematic correlations between the W bosons. A numerical study of the prospects for observing this process using same-sign dilepton signatures, including W ^± W ^± jj, diboson and heavy flavour backgrounds, at 14 TeV centre-of-mass energy is then performed. It is shown that a small excess of same-sign dilepton events from double parton scattering over a background dominated by single scattering W ^± Z(γ ^*) production could be observed at the LHC.     

Detection and quantitation of a pheomelanin component in melanin pigments using pyrolysis-gas chromatography/tandem mass spectrometry system with multiple reaction monitoring mode

Here, we describe the reliable method for the detection and quantitation of a pheomelanin component in melanin pigments. Synthetic melanins with various contents of pheomelanin-type structural units were thermally degraded, and the multiple reaction monitoring mode was applied to detect the pheomelanin markers in the pyrolysates by GC/MS/MS. The method allowed the specific detection and quantitation of a pheomelanin component in melanin with the incorporation of pheomelanin-type units as low as 0.05%. Considering highly universal character of the pheomelanin markers, the method could be applied for structural studies of natural melanin pigments being mixtures of eumelanin and pheomelanin.     

Light and heavy dansyl reporter groups in food chemistry: amino acid assay in beverages

5-Dimethylamino-1-sulfonyl naphthalene (DNS, commonly referred as dansyl) is a functionality, bearing well-established properties in directing the fragmentation, by mass spectrometry (MS), of the corresponding ionized sulfonylated derivatives. This property is shared also by its labeled analogs. The use of d(0)/d(6) DNS derivatives is now exploited in the application of the well-established isotope dilution mass spectrometric approach in the assay of complex mixtures. A new method for the quantitation of amino acids (AAs) in beverages is therefore presented, which relies on liquid chromatographic separation of their N-dansylated derivatives followed by comparative electrospray tandem MS/MS of the d(0)/d(6) isobaric mixtures. Labeled and unlabeled DNS derivatives of the selected AAs are readily available by microwave-assisted synthetic protocols. The novelty of the method is represented by the use of heavy and light DNS-isotopologue providing suitable reporter groups. Multiple-reaction monitoring has been applied in the assay of AAs in wine, pineapple juice and bergamot juice with good-to-excellent results as proved by both relative standard deviation, lower than 15%, and by the accuracy values in the range 90-110%.     

Analysis of spectral properties of acoustic noise produced during magnetic resonance imaging

Magnetic resonance imaging (MRI) technique enables non-invasive analysis of the human vocal tract during phonation. Creation of MR images of the vocal tract is accompanied by simultaneous recording of the produced speech. The paper analyzes and compares spectral properties of an acoustical noise produced by mechanical vibration of the gradient coils during scanning in the open-air MRI equipment working in a weak magnetic field with low B₀ up to 0.2 T. This noise exhibits harmonic character, so it is suitable to analyze its properties in the spectral domain. Obtained results of spectral analysis will be used to devise a new cepstral-based filtering method for noise suppression of recorded speech.     

Application of NMR Spectroscopy and Imaging in Heterogeneous Biocatalysis

Heterogeneously catalyzed enzymatic glucose isomerization was considered as a model process to extend the application of nuclear magnetic resonance (NMR) and magnetic resonance imaging techniques to the studies of biocatalytic processes and heterogeneous biocatalysts. It has been demonstrated that the T ₂ times of glucose are different for its aqueous solution in the pores of an unmodified porous support and in a heterogeneous biocatalyst, comprising bacterial cells immobilized on the same support. This observation has been used to map the spatial distribution of the active component within a packed bed of biocatalyst in a model reactor. ¹³C NMR spectroscopy was applied to follow the progress of glucose isomerization catalyzed by the heterogeneous biocatalyst in a batch reactor. The utilization of proton spin decoupling and nuclear Overhauser effect was shown to be necessary to obtain high signal-to-noise ratio in the natural abundance ¹³C NMR spectra of a glucose–fructose syrup present in the packed bed of biocatalyst. The spectra thus obtained were suitable for the quantification of the glucose-to-fructose ratio achieved in the biocatalytic reaction.     

Preparation and characterization of poly(lactic acid)/poly(methyl methacrylate) blend tablets for application in quantitative analysis by micro Raman spectroscopy

Poly(lactic acid) (PLA) is a biodegradable polymer that has a variety of applications, one of which is as biomaterial in surgery or as functional layers on implants, due to its compatibility with living tissue. This paper reports the possibilities of quantification of poly(lactic acid) (PLA) in a polymer matrix such as poly(methyl methacrylate) (PMMA) by micro Raman spectroscopy (MRS). Blends of amorphous poly(DL‐lactic acid) with poly(methyl methacrylate) were prepared by the procedure of dissolution/precipitation. Thermal properties of the blends such as the glass transition temperature (Tg) were characterized by differential scanning calorimetry (DSC). The PLA/PMMA blends exhibited only a single glass transition region, indicating that this system is miscible. The PLA/PMMA system obeys the Gordon–Taylor equation (Tg versus PLA content). Various concentration ratios of PLA blends were prepared to use as a basis for quantitative analysis by MRS. Intensities of the characteristic bands at 813 cm⁻¹ (νCOC of PMMA) and 873 cm⁻¹ (νC―COO of PLA) were used for the calculation. The calibration graph showed a good linear correlation with an R² value of 0.9985. On the basis of the calibration curve obtained, the determined content of several PLA/PMMA blends was in good agreement when compared with nominal contents. The limit of detection (LOD) and quantification (LOQ) were calculated by the calibration data set as signal‐to‐noise method. The relative standard deviation of this method was lower than 10% and the accuracy better than 4%. This study demonstrated that Raman spectroscopy provides an alternative non destructive method for quantitative analysis of PLA in a PMMA matrix. Copyright © 2015 John Wiley & Sons, Ltd.     

Semiconductor optical fibres: progress and opportunities

This paper reviews recent progress in the nascent field of semiconductor optical fibres, from the fundamentals through to device demonstration. The incorporation of semiconductor materials into both the step‐index and microstructured fibre geometries provides a route to introducing new optoelectronic functionality into existing glass fibre technologies. Herein, the various fabrication methods that have been developed as of to date are described, and their compatibility with the different semiconductor materials and fibre designs discussed. Results will be presented on the optical transmission properties of several fibre types, with particular attention being paid to the observation of nonlinear propagation in silicon core fibres. Finally, some speculation regarding the future prospects and applications of this new class of fibre will be provided.     

Action Spectroscopy on Dense Samples of Photosynthetic Reaction Centers of Rhodobacter sphaeroides WT Based on Nanosecond Laser-Flash 13C Photo-CIDNP MAS NMR

Photochemically induced dynamic nuclear polarization magic-angle spinning nuclear magnetic resonance (photo-CIDNP MAS NMR) allows for the investigation of the electronic structure of the photochemical machinery of photosynthetic reaction centers (RCs) at atomic resolution. For such experiments, either continuous radiation from white xenon lamps or green laser pulses are applied to optically dense samples. In order to explore their optical properties, optically thick samples of isolated and quinone-removed RCs of the purple bacteria of Rhodobacter sphaeroides wild type are studied by nanosecond laser-flash ¹³C photo-CIDNP MAS NMR using excitation wavelengths between 720 and 940 nm. Action spectra of both the transient nuclear polarization as well as the nuclear hyperpolarization, remaining in the electronic ground state at the end of the photocycle, are obtained. It is shown that the signal intensity is limited by the amount of accessible RCs and that the different mechanisms of the photo-CIDNP production rely on the same photophysical origin, which is the photocycle induced by one single photon.