A non-oscillatory balanced scheme for an idealized tropical climate model

We use the non-oscillatory balanced numerical scheme developed in Part I to track the dynamics of a dry highly nonlinear barotropic/baroclinic coupled solitary wave, as introduced by Biello and Majda (2004), and of the moisture fronts of Frierson et al. (2004) in the presence of dry gravity waves, a barotropic trade wind, and the beta effect. It is demonstrated that, for the barotropic/baroclinic solitary wave, except for a little numerical dissipation, the scheme utilized here preserves total energy despite the strong interactions and exchange of energy between the baroclinic and barotropic components of the flow. After a short transient period where the numerical solution stays close to the asymptotic predictions, the flow develops small scale eddies and ultimately becomes highly turbulent. It is found here that the interaction of a dry gravity wave with a moisture front can either result in a reflection of a fast moistening front or the pure extinction of the precipitation. The barotropic trade wind stretches the precipitation patches and increases the lifetime of the moisture fronts which decay naturally by the effects of dissipation through precipitation while the Coriolis effect makes the moving precipitation patches disappear and appear at other times and places.     

Nondestructive three-dimensional analysis of layered polymer structures with chemical imaging

Three-dimensional (3D) chemical information was obtained by means of a combination of two-dimensional attenuated total reflection Fourier transform infrared (ATR-FT-IR) imaging with a focal plane array detector and variable angle depth profiling. Since the penetration depth of the evanescent wave in ATR spectroscopy is not limited by diffraction, it was possible to resolve thin sandwiched polymer layers nondestructively within a stack of polymer layers. Chemical images were obtained from layers of different thickness of the laminate by moving a custom-made aperture to specific positions on the condenser lens of the ATR accessory. Sequences of absorption images detect the successive appearance of thin, buried layers of polybutylmethacrylate (d(PBMA) = 400 nm) and polycarbonate (d(TMPC) = 300 nm) in different depths of the stack of polymer layers. The depth resolution of variable-angle ATR-FT-IR imaging is sufficiently high to detect surface roughness at the interface between different polymer layers. Two different stacks of polymers with reordered sandwich-layers were imaged simultaneously, demonstrating the potential of variable angle ATR-FT-IR for 3D-imaging of a sample with xyz-heterogeneity, which can be a powerful analytical technique for materials science and biomedical research.     

Catalytic enantioselective alkene epoxidation using novel spirocyclic N-carbethoxy-azabicyclo[3.2.1]octanones

A general synthetic route allowing access to several spirocyclic N-carbethoxy-azabicyclo[3.2.1]octanones is developed. These novel ketones efficiently catalyse alkene epoxidation using Oxone^® with up to 91.5% ee.     

Synthetic approaches to 5,7-disubstituted imidazo[5,1-f][1,2,4]triazin-4-amines

The preparation of 5,7-disubstituted imidazo[5,1-f][1,2,4]triazin-4-amines, exemplified by 5-[3-(benzyloxy)phenyl]-7-cyclobutylimidazo[5,1-f][1,2,4]triazin-4-amine, was developed through a linear and three convergent synthetic strategies, with the latter providing the greatest flexibility for diversification at the 5-position at the last step of the synthesis.     

A method for computing the solubility limit of solids: application to sodium chloride in water and alcohols

We present an adaptable method to compute the solubility limit of solids by molecular simulation, which avoids the difficulty of reference state calculations. In this way, the method is highly adaptable to molecules of complex topology. Results are shown for solubility calculations of sodium chloride in water and light alcohols at atmospheric conditions. The pseudosupercritical path integration method is used to calculate the free energy of the solid and gives results that are in good agreement with previous studies that reference the Einstein crystal. For the solution phase calculations, the self-adaptive Wang-Landau transition-matrix Monte Carlo method is used within the context of an expanded isothermal-isobaric ensemble. The method shows rapid convergence properties and the uncertainty in the calculated chemical potential was 1% or less for all cases. The present study underpredicts the solubility limit of sodium chloride in water, suggesting a shortcoming of the molecular models. Importantly, the proper trend for the chemical potential in various solvents was captured, suggesting that relative solubilities can be computed by the method.     

Atomic imaging of the monolayer nucleation and unpinning of a compound semiconductor surface during atomic layer deposition

The reaction of trimethyl aluminum on the group III rich reconstructions of InAs(0 0 1) and In(0.53)Ga(0.47)As(0?0?1) is observed with scanning tunneling microscopy/spectroscopy. At high coverage, a self-terminated ordered overlayer is observed that provides the monolayer nucleation density required for subnanometer thick transistor gate oxide scaling and removes the surface Fermi level pinning that is present on the clean InGaAs surface. Density functional theory simulations confirm that an adsorbate-induced reconstruction is the basis of the monolayer nucleation density and passivation.     

High-resolution (19)F MAS NMR spectroscopy: structural disorder and unusual J couplings in a fluorinated hydroxy-silicate

High-resolution (19)F magic angle spinning (MAS) NMR spectroscopy is used to study disorder and bonding in a crystalline solid. (19)F MAS NMR reveals four distinct F sites in a 50% fluorine-substituted deuterated hydrous magnesium silicate (clinohumite, 4Mg(2)SiO(4)·Mg(OD(1-x)F(x))(2) with x = 0.5), indicating extensive structural disorder. The four (19)F peaks can be assigned using density functional theory (DFT) calculations of NMR parameters for a number of structural models with a range of possible local F environments generated by F(-)/OH(-) substitution. These assignments are supported by two-dimensional (19)F double-quantum MAS NMR experiments that correlate F sites based on either spatial proximity (via dipolar couplings) or through-bond connectivity (via scalar, or J, couplings). The observation of (19)F-(19)F J couplings is unexpected as the fluorines coordinate Mg atoms and the Mg-F interaction is normally considered to be ionic in character (i.e., there is no formal F-Mg-F covalent bonding arrangement). However, DFT calculations predict significant (19)F-(19)F J couplings, and these are in good agreement with the splittings observed in a (19)F J-resolved MAS NMR experiment. The existence of these J couplings is discussed in relation to both the nature of bonding in the solid state and the occurrence of so-called "through-space" (19)F-(19)F J couplings in solution. Finally, we note that we have found similar structural disorder and spin-spin interactions in both synthetic and naturally occurring clinohumite samples.     

Targeting of cancer cells using click-functionalized polymer capsules

Targeted delivery of drugs to specific cells allows a high therapeutic dose to be delivered to the target site with minimal harmful side effects. Combining targeting molecules with nanoengineered drug carriers, such as polymer capsules, micelles and polymersomes, has significant potential to improve the therapeutic delivery and index of a range of drugs. We present a general approach for functionalization of low-fouling, nanoengineered polymer capsules with antibodies using click chemistry. We demonstrate that antibody (Ab)-functionalized capsules specifically bind to colorectal cancer cells even when the target cells constitute less than 0.1% of the total cell population. This precise targeting offers promise for drug delivery applications.     

Linear 6,6'-biazulenyl framework featuring isocyanide termini: synthesis, structure, redox behavior, complexation, and self-assembly on Au(111)

The key step in accessing the title species (5), the first nonbenzenoid diisocyanobiaryl, involved an unexpected homocoupling of a 6-bromoazulene derivative. The reversible 2e(-) reduction of 5 was addressed electrochemically and computationally. The shifts in energies of the S(0)→S(1) and S(0)→S(2) transitions for a series of related 6,6'-biazulenyl derivatives correlate with the e(-)-donating/-withdrawing strength of their 2,2'-substituents but follow opposite trends. Species 5 adsorbs end-on (η(1)) to the Au(111) surface via one of its -NC groups to form a 2-nm-thick film. In addition, bimetallic coordination of 5's -NC termini can be readily achieved.     

The preparation of multimetallic complexes using sterically bulky N-centred tripodal dialkyl phosphino ligands

Sterically bulky monodentate and bidentate phosphines have been widely used as ligands for metal complexation and catalyst formation. Bulky tridentate phosphine ligands are however much rarer and have not been widely investigated even though they may be considered attractive ligands for coordination chemistry studies and catalysis. Here we report the synthesis of two new N-centred tripodal phosphine ligands bearing bulky cyclohexyl and tert-butyl groups. The coordination chemistry of the cyclohexyl triphosphine ligand N(CH₂PCy₂)₃ (4) was investigated and found to react with Mo and W hexacarbonyls preferentially forming bidentate metal tetracarbonyl complexes [Mo(CO)₄{N(CH₂PCy₂)₃-κ²P}] (6) and [W(CO)₄{N(CH₂PCy₂)₃-κ²P}] (7) over the expected facial capping tridentate complexes. The steric bulk of the cyclohexyl groups on the phosphorus atoms is sufficient to prevent the third arm of the ligand from coordinating and adopting the required geometry for facial coordination. This ‘steric control’ at the metal centre results in the third arm remaining freely available for further metal coordination. The coordination chemistry of this free phosphine arm on complexes 6 and 7 was investigated further and used to prepare a series of gold, platinum and silver multimetallic complexes. The X-ray crystal structures of the resulting mixed bi and trimetallic complexes [W(CO)₄{N(CH₂PCy₂)₃-κ²P}AuCl] (8), [[Mo(CO)₄{N(CH₂PCy₂)₃-κ²P}]₂(μ-PtCl₂)] (9) and [[W(CO)₄{N(CH₂PCy₂)₃-κ²P}]₂(μ-Ag)]ClO₄ (11) are reported.