FACTS: Fast analytical continuum treatment of solvation

An efficient method for calculating the free energy of solvation of a (macro)molecule embedded in a continuum solvent is presented. It is based on the fully analytical evaluation of the volume and spatial symmetry of the solvent that is displaced from around a solute atom by its neighboring atoms. The two measures of solvent displacement are combined in empirical equations to approximate the atomic (or self) electrostatic solvation energy and the solvent accessible surface area. The former directly yields the effective Born radius, which is used in the generalized Born (GB) formula to calculate the solvent-screened electrostatic interaction energy. A comparison with finite-difference Poisson data shows that atomic solvation energies, pair interaction energies, and their sums are evaluated with a precision comparable to the most accurate GB implementations. Furthermore, solvation energies of a large set of protein conformations have an error of only 1.5%. The solvent accessible surface area is used to approximate the nonpolar contribution to solvation. The empirical approach, called FACTS (Fast Analytical Continuum Treatment of Solvation), is only four times slower than using the vacuum energy in molecular dynamics simulations of proteins. Notably, the folded state of structured peptides and proteins is stable at room temperature in 100-ns molecular dynamics simulations using FACTS and the CHARMM force field.     

Association of Systemic Steroid Treatment and Outcome in Patients Treated with Immune Checkpoint Inhibitors: A Real-World Analysis

Background: Immune-related adverse events (irAEs) are inflammatory side effects, which can occur during immune-checkpoint(s) inhibitors (ICIs) therapy. Steroids are the first-line agents to manage irAEs because of their immunosuppressive properties. However, it is still debated whether or when steroids can be administered without abrogating the therapeutic efforts of immunotherapy. Methods: We retrospectively evaluated 146 patients with metastatic non-small cell lung cancer (NSCLC), melanoma and renal cell carcinoma (RCC) treated with ICIs. We assessed the progression-free survival (PFS) of patients treated with steroids due to an irAE compared to a no-steroid group. Results: The early treatment with steroid (within the first 30 days from the beginning of immunotherapy) was not related to a shorter PFS (p = 0.077). Interestingly, patients who were treated with steroids after 30 days from the start of immunotherapy had significantly longer PFS (p = 0.017). In a multivariate analysis, treatment with steroids after 30 days was an independent prognostic factor for PFS (HR: 0.59 [95% CI 0.36–0.97], p = 0.037). Conclusions: This retrospective study points out that early systemic steroids administration to manage irAEs might not have a detrimental effect on patient clinical outcome in NSCLC, melanoma and RCC patients.     

Mechanical Properties of 3-Glycidoxypropyltrimethoxysilane Based Hybrid Organic-Inorganic Materials

Hybrid organic-inorganic materials were synthesized from acid catalysed sols of tetraethyl orthosilicate, 3-glycidoxypropyltrimethoxysilane and titanium or zirconium alkoxides. The mechanical properties of these materials were measured in different conditions of preparation. The elastic modulus E was determined by a resonance method and by Knoop microindentation. After a thermal treatment at 125°C for 120 h, E was around 3–5 and 1–2 GPa for the samples synthesized with titanium butoxide or zirconium butoxide, respectively. An increase in E in the samples cured for longer times was observed. Knoop microhardness also increased with the heating time and was larger in samples synthesized from titanium alkoxides than zirconium alkoxides. The two methods gave results in good agreement when applied to samples treated for shorter times. In the other samples Knoop microindentation gave a larger value of E compared to the resonance vibration method. Hardness to elastic modulus ratio, H/E, was evaluated by Knoop microindentation. The elastic recovery at the longest heat treatment time was similar to that of soda-lime glasses. Fracture toughness was measured by three points flexural test, a _KIc in the range of 0.4–0.5 MPa m^1/2 was evaluated for samples treated during 168 h.     

Franck–Condon factors in curvilinear coordinates: the photoelectron spectrum of ammonia

An approach to the calculation of Franck–Condon factors in curvilinear coordinates is outlined. The approach is based on curvilinear normal coordinates, which allows for an easy extension of Duschinsky’s transformation to the case of curvilinear coordinates, and on the power series expansion of the kinetic energy operator. Its usefulness in the case of molecules undergoing large displacements of their equilibrium nuclear configurations upon excitation is then demonstrated by an application to the vibrational structure of the photoelectron spectrum of ammonia, using an anharmonic potential only for the symmetric stretching and bending coordinates of the radical cation.     

Synthesis and antiviral activity of new benzothiadiazine dioxide derivatives

A series of 2,1,3‐ and 1,2,4‐benzothiadiazine derivatives were synthesized by alkylation via Mitsunobu reaction and evaluated for their antiviral activity against ADV, HHV‐6, Cox‐B5 and H‐CMV. Most of them were active at micromolar level against one or more viral strains. All the molecules studied are poorly cytotoxic (maximum non toxic concentrations were >25μM), except one compound that presents a higher cytotoxicity (maximum non toxic concentration was 6 μM).     

Synthesis of new C-glycosyl aza-β3-amino acids building blocks

New C-glycosylated N^β-protected aza-β³-amino acid building blocks have been prepared from C-glycosyl aldehydes of gluco and galacto configuration by reductive amination and subsequent N-alkylation. These moieties were elaborated to β-dipeptides by elongation at the C- or the N-terminus establishing their ability to be incorporated in original glycosylated foldamers.     

Probenecid and benzamide: cocrystal prepared by a green method and its physico-chemical and pharmaceutical characterization

Journal of Thermal Analysis and Calorimetry - The eco-friendly method of kneading was here used to synthesize a cocrystal of probenecid, an uricosuric drug used in treating gout and hyperuricemia,...