An analysis of two local measures of the electronic localization: a comparison with the ELF and the exchange-correlation density results

In this work we have explored the performance of two functions, recently proposed by Ayers [J. Chem. Sci., 2005, 117, 441], with the purpose of quantifying local electron localization. The first function, ζ(h), measures the total fluctuation per electron in the number of electrons at a given position r(1), while the second one, ζ(R), is a local representation of the minimum fluctuation criterion for electron localization. The study is carried out through a set of diatomic molecules that covers a wide range of covalent/polar character. Additionally, we have also calculated the electron localization function and the exchange-correlation hole along the internuclear axis. We have found that, for all the studied molecules, the numerical integration involved in computing ζ(h) did not converge. We think that this is so because the hole correlation calculations are not able to yield its correct asymptotic decaying behavior for large absolute values of the internuclear distances. On the other hand, the calculation of ζ(R) has proved to be feasible, and the information obtained from it has been concluded to be compatible to that rendered by the electron localization function (ELF) and the exchange-correlation density. Moreover, it has been also found that the results for ζ(R) allow to quantify the relative degree of electron localization within different molecular regions.     

Heparin Binding by Murine Recombinant Prion Protein Leads to Transient Aggregation and Formation of RNA-Resistant Species

The conversion of cellular prion protein (PrP(C)) into the pathological conformer PrP(Sc) requires contact between both isoforms and probably also requires a cellular factor, such as a nucleic acid or a glycosaminoglycan (GAG). Little is known about the structural features implicit in the GAG-PrP interaction. In the present work, light scattering, fluorescence, circular dichroism, and nuclear magnetic resonance (NMR) spectroscopy were used to describe the chemical and physical properties of the murine recombinant PrP 23-231 interaction with low molecular weight heparin (LMWHep) at pH 7.4 and 5.5. LMWHep interacts with rPrP 23-231, thereby inducing transient aggregation. The interaction between murine rPrP and heparin at pH 5.5 had a stoichiometry of 2:1 (LMWHep:rPrP 23-231), in contrast to a 1:1 binding ratio at pH 7.4. At binding equilibrium, NMR spectra showed that rPrP complexed with LMWHep had the same general fold as that of the free protein, even though the binding can be indicated by significant changes in few residues of the C-terminal domain, especially at pH 5.5. Notably, the soluble LMWHep:rPrP complex prevented RNA-induced aggregation. We also investigated the interaction between LMWHep and the deletion mutants rPrP Δ51-90 and Δ32-121. Heparin did not bind these constructs at pH 7.4 but was able to interact at pH 5.5, indicating that this glycosaminoglycan binds the octapeptide repeat region at pH 7.4 but can also bind other regions of the protein at pH 5.5. The interaction at pH 5.5 was dependent on histidine residues of the murine rPrP 23-231. Depending on the cellular milieu, the PrP may expose different regions that can bind GAG. These results shed light on the role of GAGs in PrP conversion. The transient aggregation of PrP may explain why some GAGs have been reported to induce the conversion into the misfolded, scrapie conformation, whereas others are thought to protect against conversion. The acquired resistance of the complex against RNA-induced aggregation explains some of the unique properties of the PrP interaction with GAGs.     

Singlet oxygen generation ability of squarylium cyanine dyes

The quantum yields for singlet oxygen generation of several squarylium cyanine dyes derived from benzothiazole, benzoselenazole and quinoline, displaying absorption within the so-called “phototherapeutic window” (600–1000 nm), were determined, envisioning their potential usefulness for photodynamic therapy (PDT). The determination was performed by a direct method measuring the luminescence decay of the dyes in the near infrared. Considering the absorption and the quantum yields displayed by some of the dyes, these seemed to be potential candidates as sensitizers for PDT.     

Synthesis,characterization and antitumor activity of palladium(II) complexes of imidazolidine-2-thione

Complexes of the type cis-[PdX₂(imzt)(PPh₃)] {imzt = imidazolidine-2-thione; PPh₃ = triphenylphosphine; X = Cl (1), Br (2), I (3), SCN (4)} have been synthesized and characterized by elemental analyses, molar conductance, IR and ¹H NMR spectroscopies. The complex 1·MeOH was obtained from the reaction of [PdCl₂(CH₃CN)₂], imidazolidine-2-thione and triphenylphosphine in CHCl₃/CH₃OH. Complexes 2·MeOH, 3 and 4 were prepared by metathesis of the chlorido ligands in 1 with bromide, iodide and thiocyanate, respectively. Elemental analyses showed good agreement with the expected mononuclear compositions, while the molar conductivities of the complexes in DMF were consistent with their nonelectrolytic nature. NMR spectra confirmed coordination of the imidazolidine-2-thione and triphenylphosphine ligands. Single-crystal X-ray diffraction determination of 1·CH₃OH showed that the coordination geometry around Pd^II is nearly square planar, with the chlorido ligands in a cis configuration. All four complexes have been tested in vitro by XTT assay for their cytotoxicity against human glioblastoma cell line (U87MG). The binding of 1 with guanosine was studied by ¹H NMR spectroscopy, revealing that the coordination takes place via N7.     

The Smallest Regular Semigroups with all Four Skew Pairs of Idempotents

An ordered pair (e, f) of idempotents of a regular semigroup is called a skew pair if ef is not idempotent whereas fe is idempotent. We have shown previously that there are four distinct types of skew pairs of idempotents. Here we consider the smallest regular semigroups that contain precisely one of each of these four types. We show that, to within isomorphism and dualisomorphism, there are six such semigroups and characterise them as quotient semigroups of certain regular Rees matrix semigroups.