A structural remedy toward bright dipolar fluorophores in aqueous media

The donor–acceptor (D–A) type dipolar fluorophores, an important class of luminescent dyes with two-photon absorption behaviour, generally emit strongly in organic solvents but poorly in aqueous media. To understand and enhance the poor emission behaviour of dipolar dyes in aqueous media, we undertake a rational approach that includes a systematic structure variation of the donor, amino substituent of acedan, an important two-photon dye. We identify several factors that influence the emission behaviour of the dipolar dyes in aqueous media through computational and photophysical studies on new acedan derivatives. As a result, we can make acedan dyes emit bright fluorescence under one- and two-photon excitation in aqueous media by suppressing the liable factors for poor emission: 1,3-allylic strain, rotational freedom, and hydrogen bonding with water. We also validate that these findings can be generally extended to other dipolar fluorophores, as demonstrated for naphthalimide, coumarin and (4-nitro-2,1,3-benzoxadiazol-7-yl)amine (NBD) dyes. The new acedan and naphthalimide dyes thus allow us to obtain much brighter two-photon fluorescent images in cells and tissues than in their conventional forms. As an application of these findings, a thiol probe is synthesized based on a new naphthalimide dye, which shows greatly enhanced fluorescence from the widely used N,N-dimethyl analogue. The results disclosed here provide essential guidelines for the development of efficient dipolar dyes and fluorescence probes for studying biological systems, particularly by two-photon microscopy.     

The room-temperature superstructure of ZrP2O7 is orthorhombic: there are no unusual 180 degrees P-O-P bond angles

The structure of room-temperature ZrP2O7 is shown to be orthorhombic by a combination of high-resolution synchrotron powder diffraction and single-crystal synchrotron diffraction data. Small nontwinned single crystals were obtained by synthesizing the compound using solvothermal methods at temperatures below the cubic to orthorhombic phase transition. The average P-O-P angle is 146 degrees. DFT calculations (B3LYP/AUG-cc-pVDZ) on the isolated P2O7(4-) anion yield a P-O-P angle of 153.42 degrees and indicate that the barrier to inversion is of the order 3.6 kJ mol(-1).     

Origin of the dynamic transition upon pressurization of crystalline proteins

We study the role of hydration water in the dynamic transition of low-hydrated proteins upon pressurization found recently (Meinhold, L.; Smith, J. C. Phys. Rev. E 2005, 72, 061908). Clustering and percolation of water in the hydration shells of protein molecules in crystalline Staphylococcal nuclease are analyzed at various pressures. The number of water molecules in the hydration shell increases and the hydrogen-bonded network of hydration water spans with increasing pressure. The dynamic transition of protein occurs when the spanning water network exists with the probability of about 50% and hydration water shows large density fluctuations. Formation of a spanning water network upon pressurization promotes protein dynamics as in the case of the dynamic transition with increasing hydration. Properties of hydration water in various thermodynamic states and their influence on biological function are discussed.     

Oscillation and nonoscillation of nonlinear second order difference equations

In this paper, we study oscillation and nonoscillation behaviour of the second order nonlinear difference equations of the form $$\Delta (r_n \psi (x_n )\Delta x_n ) + q_{n + 1} f(x_{n + 1} ) = 0, n \in N(n_o ),$$ and $$\Delta (r_n \psi (x_n )\Delta x_n ) + q_n f(n,x_n ) = 0, n \in N(n_o ),$$ whereN(n _o ) =n _o ,n _o + 1, …, (n _o is a fixed nonnegative integer number), Δx_n =x _n +1?x _n is the forward difference operator,x :N(n _o ) → ?,r :N(n _o ) → (0, ∞), Ψ : ? → (0, ∞),f is a real valued continuous function, andq _n is a sequence of real valued.     

Design of extractive distillation process with mixed entrainer

The separation of two systems containing minimum boiling azeotropes (acetone—methanol and tetrahydrofuran (THF)—water) was performed using extractive distillation with a heavy boiling mixed entrainer consisting of two compounds. The entrainer constituents did not form new azeotropes with each other and with the components of the original mixture. An analysis of the mixed entrainer influence on the vapor-liquid equilibrium (VLE) and relative volatility provides an understanding of the cases in which the separation by extractive distillation (ED) in the presence of the mixed entrainer revealed energy benefits over their individual constituents. New results for application of the mixed entrainer monoethanolamine (MEA)—ethylene glycol (EG) and dimethyl-sulphoxide (DMSO)—glycerol for the separation of THF—water and acetone—methanol, respectively, are presented for the first time. The individual selective agents were chosen from the efficient entrainers discussed in the literature. The calculations were performed using the platform Aspen Plus 7.3. Different extractive distillation flowsheets are provided for the zeotropic mixed agents, viz. with two or three columns. For the ED of the binary mixtures investigated, the structures of the different separation schemes, the operating parameters of the columns, and the energy consumptions are presented and compared. The application of the mixed entrainer MEA—EG fed into the ED column with pre-mixing can be recommended, providing up to 1.7 % of energy saving for acetone—methanol separation. In the case of THF—water, the mixed entrainer DMSO—glycerol provides 0.8 % of energy saving. The separate inputs of the individual constituents of the mixed entrainer led to a significant increase in the energy consumptions of the flowsheet because of the third regeneration column, hence this flowsheet cannot be recommended for use in the separation of both mixtures.     

Synthesis and multiparameter sensor properties of the crown‐containing thiophene derivatives

A novel ditopic receptor was constructed as a combination of bisthiophene with pyridinylvinyl and crown‐containing styryl fragments. In the receptor, the pyridine residue was able to coordinate Fe²⁺, Cd²⁺, and Mg²⁺ metal cations, whereas the oxocrown ether moiety bound with the alkaline earth metal (Mg²⁺, Ca²⁺, and Ba²⁺) cations. ¹H NMR, optical, electrochemical, and ESI‐MS results provided conclusive evidence of a complex formation through both the coordination centers of the molecule. The obtained results showed that cation complexation induces optical and electrochemical changes, particularly for each binding center. This type of multiparameter sensor provides interesting perspectives for the future design of unique sensors, promising different analytical techniques. Copyright © 2009 John Wiley & Sons, Ltd.     

Properties of spanning water networks at protein surfaces

The formation of a spanning two-dimensional hydrogen-bonded water network at the surface of proteins via a percolation transition enables their biological function. We show in detail how the spanning (percolating) water network appears at the surfaces of model hydrophilic spheres and at the surface of a single protein (lysozyme) molecule. We have found essential correlations of the linear extension, radius of gyration, and position of the center of mass of the largest water cluster with its size. The specific two-peak structure of the probability distribution of the largest cluster size allowed us to study various properties separately for spanning and nonspanning largest clusters. The radius of gyration of the spanning cluster always exceeds the radii of the spheres or the effective radius of the protein. Any spanning cluster envelops essentially more than half of the surface area. The temporal decay of the spanning networks shows a stretched exponential character. Their average lifetime at the percolation threshold is about the lifetime of a water-water hydrogen bond.     

Synthesis and characterization of polyamides obtained from tartaric acid and L-lysine

Two sets of AA · BB-type polyamides (PLyTA) were synthesized from natural compounds L-lysine and D- or L-tartaric acid via the active ester polycondensation method. The carboxyl and hydroxyl side groups were orthogonally protected as methyl ester and methyl ether, respectively. Direct reaction of methyl L-lysinate dihydrochloride with bis(pentachlorophenyl) di-O-methyl tartaric acid led to the aregic polyamide ar-PLyTA, whereas isoregic (ir-PLyTA) and syndioregic (sr-PLyTA) polyamides were obtained by polycondensation of specifically designed amide–aminoacid and amide–diamine monomeric precursors, respectively. These polyamides have intrinsic viscosities in the 0.50–0.76 dl g⁻¹ range, display optical activity, and are readily soluble in chloroform. They start to decompose well above 200 °C and display glass-transition temperatures at 100–105 °C. DSC and X-ray diffraction results indicated that these polyamides are not crystalline but they seem to adopt a partially ordered phase. No differences in properties other than optical rotation were observed between PLyTA made of D- and L-tartaric acid.