Unsupervised learning of pharmacokinetic responses

Pharmacokinetics (PK) is a branch of pharmacology dedicated to the study of the time course of drug concentrations, from absorption to excretion from the body. PK dynamic models are often based on homogeneous, multi-compartment assumptions, which allow to identify the PK parameters and further predict the time evolution of drug concentration for a given subject. One key characteristic of these time series is their high variability among patients, which may hamper their correct stratification. In the present work, we address this variability by estimating the PK parameters and simultaneously clustering the corresponding subjects using the time series. We propose an expectation maximization algorithm that clusters subjects based on their PK drug responses, in an unsupervised way, collapsing clusters that are closer than a given threshold. Experimental results show that the proposed algorithm converges fast and leads to meaningful results in synthetic and real scenarios.     

Fluorinated Musk Fragrances: The CF2 Group as a Conformational Bias Influencing the Odour of Civetone and (R)‐Muscone

The difluoromethylene (CF₂) group has a strong tendency to adopt corner over edge locations in aliphatic macrocycles. In this study, the CF₂ group has been introduced into musk relevant macrocyclic ketones. Nine civetone and five muscone analogues have been prepared by synthesis for structure and odour comparisons. X‐ray studies indeed show that the CF₂ groups influence ring structure and they give some insight into the preferred ring conformations, triggering a musk odour as determined in a professional perfumery environment. The historical conformational model of Bersuker and co‐workers for musk fragrance generally holds, and structures that become distorted from this consensus, by the particular placement of the CF₂ groups, lose their musk fragrance and become less pleasant.     

Mimicking the cell membrane with block copolymer membranes

Cell membranes are essential barriers in Nature. To understand their properties and functions and to develop desirable applications, a simple and elegant approach is to study membranes that mimic the cell membrane. Lipid bilayers represent simple models that are physiologically representative when in the form of mixtures of various lipids, but they are not adequately stable even when covered with amphipathic proteins or when combined with polymers, thus preventing technological applications. This makes necessary the design of completely synthetic membranes. In this respect, amphiphilic copolymers that self‐assemble under dilute aqueous conditions and generate supramolecular polymer vesicles or films are ideal candidates for synthetic membranes. Their versatility in terms of chemistry and properties (permeability, mechanical stability, thickness), if appropriately designed, enable the insertion of biological molecules, such as membrane proteins and biopores, or the attachment of biomolecules at their surfaces. Here, we present the domain of synthetic membranes based on amphiphilic copolymers beginning with their generation and up to their applications in medicine, the food industry, and technology. Even though significant progress has been made in combining them with membrane proteins, open questions remain with respect to desired properties that could accommodate biological molecules and support further development of the field, from both the point of view of fundamental understanding and of applications. © 2012 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem, 2012     

Mobility of small molecules in membrane materials based on copolyimide P84

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Thiazonaphthalimide derivatives: Synthesis and interaction with DNA

The synthesis of several thiazonaphthalimide derivatives is described. The exclusive formation of angular rather than linear isomers was unequivocally demonstrated by NMR and single crystal X-ray diffraction. Their photophysical properties and ability to bind calf-Thymus DNA with affinities in the range of 10⁴ makes them interesting candidates to probe DNA by fluorescence.     

Depositing nanoparticles inside millimeter-size hollow tubing

The inner and the outer walls of hollow tubing with an inner diameter of 0.4-0.9 cm and an outer diameter of 0.6-1.3 cm were coated with silver nanoparticles (NPs) by a one-step process using ultrasound irradiation. The structure and morphology of the nanoparticles (NPs) inside the hollow tubing and on the outer surface were characterized using methods such as XRD, TEM, HR-TEM, and HRSEM. The inner surface of the tubing was found to be coated with more silver than the outer surface. The coating was done on tubing made of rubber, PVC, Teflon and polyethylene. Sonochemistry is demonstrated as a method for depositing nanoparticles on the inner wall of a tube.