In situ and real-time visualisation of oxygen distribution in DMFC using a porphyrin dye compound

A luminescent porphyrin dye film has been coated onto a transparent separator on the cathode side of a direct methanol fuel cell (DMFC) to visualise clearly oxygen distribution under operating conditions by analysing emission from the dye.     

Diffusion of metal complexes inside of silica-surfactant nanochannels within a porous alumina membrane

The present paper describes diffusivities of a series of metal complexes inside of silica-surfactant nanochannels (channel diameter = 3.4 nm), which were formed within a porous alumina membrane by a surfactant-templated method using cetyltrimethylammonium bromide (CTAB) as a template surfactant. The metal complexes used in this study were Fe(CN)6(3-), Ru(NH3)6(3-), ferrocenecarboxylic acid (Fc-COO-), (ferrocenylmethyl)-trimethylammonium (Fc-NMe3+), N,N-(dimethylamminomethyl)ferrocene (Fc-NMe2), and ferrocene methanol (Fc-OH). Apparent diffusion coefficients of these metal complexes were estimated by measuring their mass transports through the silica-surfactant nanochannels. The estimated apparent diffusion coefficients were on the order of 10(-11) cm2 s(-1) for Fe(CN)6(3-) and Ru(NH3)6(3-), and these values were five orders of magnitude smaller than those in a bulk aqueous solution. For the ferrocene derivatives, the apparent diffusion coefficients of charged ferrocene derivatives are almost the same (5.3 x 10(-11) cm2 s(-1) for Fc-COO- and 5.4 x 10(-11) cm2 s(-1) for Fc-NMe3+), whereas neutral ferrocene derivatives (Fc-NMe2 and Fc-OH) show faster diffusion than the charged species. In addition, the apparent diffusion coefficient of Fc-NMe2 (27 x 10(-11) cm2 s(-1)) was about three times larger than that of Fc-OH (10 x 10-11 cm2 s(-1)). The difference in these diffusion coefficients is discussed by considering the mesostructure of the silica-surfactant nanochannels, that is, an ionic interface with cationic head groups of CTA and their counteranions, a hydrophobic interior of the micellar phase, and a silica framework. As a result, it is inferred that the slow diffusivities of the charged metal complexes are due to the electrostatic interaction between the charged species and the ionic interface, whereas less interaction between neutral ferrocenes and the ionic interface causes distribution of metal complexes into the hydrophobic micellar phase, which is a less viscous medium compared to the ionic interface, resulting in the faster diffusivities of the neutral species.     

Evidence for the cation-pi interaction between Cu2+ and tryptophan

The cation-pi interaction, a noncovalent interaction of electrostatic nature between a cation and an electron-rich pi system, is increasingly recognized as an important force that influences the structures and functions of molecules including proteins. Unlike other metal cations, the transition metal cation Cu2+ is not regarded to take part in a cation-pi interaction because Cu2+ tends to oxidize the pi electron system, in particular that of Trp, and to introduce covalency in the metal-pi electron interaction. This paper reports the first spectral evidence for the cation-pi interaction between Cu2+ and Trp. The Cu2+ ion bound to the amino N-terminal Cu2+/Ni2+ binding motif composed of three amino acid residues interacts with the indole ring of the fourth Trp residue in a noncovalent manner. The Cu2+-Trp interaction produces a distinct negative band at 223 nm in circular dichroism (CD), which disappears upon mutation or depletion of the Trp residue or upon replacement of the Cu2+ ion by Ni2+. In UV absorption, a pair of negative/positive intensity changes is generated at 222/231 nm by the Cu2+-Trp interaction, being consistent with the previous observations on the indole ring interacting with K+ or a cationic His imidazole ring. The negative CD band around 223 nm is characteristic of the Cu2+-Trp pair and may be useful as a marker of the Cu2+-Trp cation-pi interaction. Coordination of negatively charged ligands to Cu2+ is suggested to be important for the cation to be involved in a cation-pi interaction.     

Investigation of binding of UDP-Galf and UDP-[3-F]Galf to UDP-galactopyranose mutase by STD-NMR spectroscopy, molecular dynamics, and CORCEMA-ST calculations

UDP-galactopyranose mutase (UGM) is the key enzyme involved in the biosynthesis of Galf. UDP-Galp and UDP-Galf are two natural substrates of UGM. A protocol that combines the use of STD-NMR spectroscopy, molecular modeling, and CORCEMA-ST calculations was applied to the investigation of the binding of UDP-Galf and its C3-fluorinated analogue to UGM from Klebsiella pneumoniae. UDP-Galf and UDP-[3-F]Galf were bound to UGM in a manner similar to that of UDP-Galp. The interconversions of UDP-Galf and UDP-[3-F]Galf to their galactopyranose counterparts were catalyzed by the reduced (active) UGM with different catalytic efficiencies, as observed by NMR spectroscopy. The binding affinities of UDP-Galf and UDP-[3-F]Galf were also compared with those of UDP-Galp and UDP by competition STD-NMR experiments. When UGM was in the oxidized (inactive) state, the binding affinities of UDP-Galf, UDP-Galp, and UDP-[3-F]Galf were of similar magnitudes and were lower than that of UDP. However, when UGM was in the reduced state, UDP-Galp had higher binding affinity compared with UDP. Molecular dynamics (MD) simulations indicated that the "open" mobile loop in UGM "closes" upon binding of the substrates. Combined MD simulations and STD-NMR experiments were used to create models of UGM with UDP-Galf and UDP-[3-F]Galf as bound ligands. Calculated values of saturation-transfer effects with CORCEMA-ST (complete relaxation and conformational exchange matrix analysis of saturation transfer) were compared to the experimental STD effects and permitted differentiation between two main conformational families of the bound ligands. Taken together, these results are used to rationalize the different rates of catalytic turnover of UDP-Galf and UDP-[3-F]Galf and shed light on the mechanism of action of UGM.     

Coordination asymmetry in divanadium(V) compounds containing a V2O3 core: synthesis, characterization, and redox properties

A general protocol for the synthesis of micro-oxo divanadium(V) compounds [LOV(micro-O)VO(Salen)] (1-5) incorporating coordination asymmetry has been developed for the first time. One of the vanadium centers in these compounds has an octahedral environment, completed by tetradentate Salen ligand, while the remaining center has square pyramidal geometry, made up of tridentate biprotic Schiff-base ligands (L2-) with ONO (1-3) and ONS (4, 5) type donor combinations. Single crystal X-ray diffraction analysis, ESI-MS, and NMR (both 1H and 51V) spectroscopy have been used extensively to establish their identities. The V(1)-O(6)-V(2) bridge angle in these compounds, save 3, lie in a narrow range (166.20(9)-157.79(16) degrees) with the V2O3 core having a rare type of twist-angular structure, somewhat intermediate between the regular anti-linear and the syn-angular modes. For 3, however, the bridge angle is sufficiently smaller 117.92(8) degrees that it forces the V2O3 core to adopt an anti-angular geometry. The V(1)...V(2) separations in these molecules (3.7921(7)-3.3084(6) A) are by far the largest compared to their peers containing a V2O3 core. The molecules retain the binuclear structures also in solution as confirmed by NMR spectroscopy. Their redox behaviors appear quite interesting, each undergoing a one-electron reduction in the positive potential range (E1/2, 0.42-0.45 V vs Ag/AgCl) to generate a trapped-valence mixed-oxidation products [LVVO-(micro-O)-OVIV(salen)]1-, confirmed by combined coulometry-EPR experiments. The bent V-O-V bridge in these molecules probably prevents the symmetry-constrained vanadium d xy orbitals, containing the unpaired electron, to overlap effectively via the ppi orbitals of the bridging oxygen atom, thus accounting for the trapped-valence situation in this case.     

Synthesis of Selectively gem-Difluorinated Molecules; Chiral gem-Difluorocyclopropanes via Chemo-Enzymatic Reaction and gem-Difluorinated Compounds via Radical Reaction

The incorporation of fluorine atoms into an organic compound can alter the chemical reactivity or biological activity of the resulting compound due to the strong electron withdrawing nature of the fluorine atom. We have synthesized many original gem-difluorinated compounds and described the results in four sections. The first section describes the synthesis of optically active-gem-difluorocyclopropanes via the chemo-enzymatic reaction; we applied these compounds to liquid crystalline molecules, then further discovered a potent DNA cleavage activity for the gem-difluorocyclopropane derivatives. The second section describes the synthesis of selectively gem-difluorinated compounds via a radical reaction; we synthesized fluorinated analogues of a sex pheromone of the male African sugarcane borer, Eldana saccharina, and used the compounds as proof for investigating the origin of pheromone molecule recognition on the receptor protein. The third involves the synthesis of 2,2-difluorinated-esters by visible light-driven radical addition of 2,2-difluoroacetate with alkenes or alkynes in the presence of an organic pigment. The last section describes the synthesis of gem-difluorinated compounds via the ring-opening of gem-difluorocyclopropanes. We further developed a novel method of synthesizing gem-difluorohomoallylic alcohols via the ring-opening of gem-difluorocyclopropane and aerobic oxidation by photo-irradiation in the presence of an organic pigment. Since gem-difluorinated compounds that were prepared by the present method have two olefinic moieties with a different reactivity at the terminal position, we accomplished the synthesis of four types of gem-difluorinated cyclic alkenols via the ring-closing-metathesis (RCM) reaction.     

Highly enantioselective and diastereoselective 1,3-dipolar cycloaddition reactions between azomethine imines and 3-acryloyl-2-oxazolidinone catalyzed by binaphthyldiimine-Ni(II) complexes

[reaction: see text] We have found the first example of high levels of asymmetric induction (97-74% ee) along with high diastereoselectivity (>99:1-64:36) in dipole-HOMO-/dipolarophile-LUMO-controlled asymmetric 1,3-dipolar cycloaddition reactions between fused azomethine imines and 3-acryloyl-2-oxazolidinone using a chiral BINIM-Ni(II) complex as a chiral Lewis acid catalyst.     

A novel practical synthesis of benzothiazoles via Pd-catalyzed thiol cross-coupling

A convenient synthesis of substituted benzothiazoles from 2-bromoanilides has been accomplished. The various 2-bromoanilides were reacted with an alkyl thiolate in high yields using a palladium catalyst. The resulting sulfides were easily converted to the corresponding benzothiazoles via the simultaneous generation of thiols and condensation under basic or acidic conditions.     

Laccase-catalyzed conversion of green tea catechins in the presence of gallic acid to epitheaflagallin and epitheaflagallin 3-O-gallate

Green tea extract containing catechin mixtures was treated with gallic acid using laccase (EC 1.10.3.2) to improve its function as a food material. After enzymatic oxidation, two new products were detected on an HPLC chromatogram. These products were purified by extraction with ethyl acetate, sequential column chromatographies, and crystallization. On the basis of ¹H/¹³C NMR, MALDI-TOF/high resolution MS, and UV-visible absorption spectral analyses, they were confirmed to be epitheaflagallin (5) and epitheaflagallin 3-O-gallate (6). This enzymatic process allows us to preferentially convert catechin derivatives in a crude mixture of green tea into different compounds.