Development of a simultaneous measurement system of x‐ray diffraction and raman spectra: Application to structural study of crystalline‐phase transitions of chain molecules

The development of a bench‐top‐type system for simultaneous measurement of X‐ray diffraction and Raman spectra has been made to investigate structural changes in the phase transitions of chain molecules such as polyethylene, n‐alkane, and so forth from various viewpoints. For the X‐ray diffraction measurement an imaging plate or a charge‐coupled device camera was used as a two‐dimensional detector. For the Raman spectral measurement a miniature Raman spectrometer was used with optical fibers for the irradiation of incident laser beams and collection of scattered signals. For example, in the heating process of the n‐C₃₀H₆₂ sample, the phase transition from orthorhombic‐to‐hexagonal lattices could be detected clearly by the X‐ray and Raman measurements. By comparing these two different types of data in detail, an intimate relationship between conformational disordering and rotational motion of molecular chains is detected more clearly than before. Also, similar discussion can be made for the orthorhombic‐to‐hexagonal phase transition of the geometrically constrained polyethylene sample occurring immediately below the melting point. Another example concerns the structural change in the photoinduced solid‐state polymerization of cis,cis‐diethylmuconate single crystal. From the shifts in the X‐ray reflection position and Raman frequency characteristic of the produced polymer, it was found that the molecular deformation of the polymer chains and lattice strain was induced in the early stage of the polymerization reaction. For the ferroelectric‐phase transition of vinylidene fluoride copolymer, the simultaneous measurement was made for collecting triple information of small‐angle and wide‐angle X‐ray scatterings and Raman spectra to know the relationship between the structural change in the crystal lattice and the morphological change in the lamellar stacking mode. © 2002 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 40: 495–506, 2002; DOI 10.1002/polb.10112     

Organic layered crystals with adjustable interlayer distances of 1-naphthylmethylammonium n-alkanoates and isomerism of hydrogen-bond networks by steric dimension

A series of 1-naphthylmethylammonium n-alkanoates from acetate to triacontanoate produce isomorphic layered structures in the crystalline state. The interlayer distances, d-spacings, are proportional to the lengths of the alkyl chains. This is attributed to synergic intermolecular interactions; pi-pi and CH-pi interactions of the naphthalene rings between the cations, hydrophobic interactions of the alkyl chains, and two-dimensional hydrogen-bond networks between the primary ammonium cations and the carboxylate anions. Salts made from carboxylic acids wider than 5.5 A in the cross sections produce another columnar structure with a one-dimensional ladder-type hydrogen-bond network. Steric parameters of the acid components provide an explanation for the isomerism of the hydrogen-bond network.     

Holography and string dynamics in time-dependent backgrounds

We study the dynamics of D-branes in a smooth time-dependent background. The theory on the branes is a time-dependent noncommutative field theory. We find the metric and fluxes that determine the dual holographic closed string theory. This provides a concrete example of holography in a cosmological setting.     

A novel organic intercalation system with layered polymer crystals as the host compounds derived from 1,3-diene carboxylic acids

A new type of organic intercalation system using poly(muconic acid) and poly(sorbic acid) crystals as the host compounds is described. The layered polymer crystals as the host are derived from benzyl-, dodecyl-, or naphthylmethylammonium salts of (Z,Z)-muconic or (E,E)-sorbic acids by topochemical polymerization. The subsequent solid-state hydrolysis of the resulting ammonium polymer crystals provides the corresponding carboxylic acid polymer crystals. When alkylamines are reacted with poly(muconic acid) or poly(sorbic acid) crystals dispersed in methanol at room temperature for a few hours, the intercalation proceeds to give layered ammonium polymer crystals via solid-state reactions, in which the polymers maintain a layered structure throughout. The interplanar spacing value of the polymer crystals changes according to the size of the guest molecules; that is, it exactly depends on the carbon number of the alkylamines used for each reaction of poly(muconic acid) or poly(sorbic acid) crystals. The stacking structure of alkyl chains with a tilt in the intercalated alkylammonium layers exists irrespective of the chemical and crystal structures of the host polymers. The intercalation of higher alkylamines into poly(muconic acid) crystals proceeds fast and quantitatively, while the conversion is dependent on the reaction conditions such as the structure and amount of the amine and the reaction time during the intercalation with poly(sorbic acid) crystals, due to the difference in the repeating layered structures of these polymer crystals. Some functional amines are also used as the guest molecules for this organic intercalation system.     

Profiling the Cell Surface Glycome of Five Fungi Using Lectin Microarray

Fungal surface glycans play roles in cell protection and interaction. Our knowledge of fungal glycans, however, is limited to model yeasts and a few medically/industrially important fungi. We evaluated the usefulness of a lectin microarray in analysis of live cell surface glycans and then applied the technique to glycome of varieties of yeast-form fungi from various phyla and subphyla. We found glycan profiles are different among and within taxonomic groups. For example, Saccharomycotina were classified into two groups, one bound to mannose-specific lectins and the other bound to galactose/N-acetylgalactosamine-specific lectins. In Basidiomycota, Pucciniomycotina yeasts were distinguished from other subphylum members in binding to fucose-specific lectins. Supplemental materials are available for this article. Go to the publisher's online edition of Journal of Carbohydrate Chemistry to view the free supplemental file.     

Conformational Stability of 2,2′-Dialkoxybenzpinacols in Solid State

Abstract

X-ray analyses of the 2,2′-dialkoxybenzpinacols have established that the previously tentative assignment of configuration is incorrect. For example, the dl-and meso-isomer of 2,2′-dimethoxy-, 2,2′-diethoxy-, and 2,2′-dibutoxybenzpinacols proved to have a rigid conformation (1aα, 1bα, 1eα) and (1aβ, 1bβ, 1cα) where hydroxy groups are always in an anti fashion, in the solid state, respectively. MM2 and semi-empirical molecular orbital calculations for possible conformations were performed, suggesting that the conformational stability of the present pinacols is controlled by repulsive gauche interactions between aryl groups associated with intramolecular hydrogen bondings.     

Practical, general, and systematic method for optical resolution of gem-dihalo- and monohalocyclopropanecarboxylic acids utilizing chiral 1,1'-binaphtholmonomethyl ethers: application to the synthesis of three chiral pesticides

We performed an efficient practical and systematic optical resolution method for gem-dihalo- and monohalocyclopropanecarboxylic acids and utilizing chiral 1,1'-binaphthol monomethyl ether (R)- as the key auxiliary. Direct esterification of with (R)- gave two 1R- and 1S-diastereomeric esters with marked different R(f) values, both of which were easily separated using simple column chromatography. Monodehalogenation of separated chiral esters using t-BuMgCl and cat. Co(dppe)(2)Cl(2) gave two 1,2-trans- and 1,2-cis-diastereomers with markedly different R(f) values, both of which were similarly separated using simple column chromatography. The obtained diastereomers and were easily hydrolyzed to the desired enantiopure acids (>99%) and (>99%), respectively, with recovery of (R)-, both in good to excellent yields. Utilizing the present method, important chiral agrochemicals, carpropamid and fencyclate , were readily synthesized. Pyrethroid with three asymmetric centers was efficiently synthesized in a much better yield compared with the reported method.     

SmI2-promoted Reformatsky-type reaction and acylation of alkyl 1-chlorocyclopropanecarboxylates

In the presence of HMPA in THF, highly stereoselective SmI(2)-promoted substitutions of alkyl 1-chlorocyclopropanecarboxylates 1 using various ketones, aldehydes (Reformatsky-type reaction), and acyl chlorides (acylation) proceeded to give trans-adducts (2 or 5) in good to high yield with excellent trans-stereoselectivity (trans-add/cis-add = > 99/1). The Reformatsky-type reaction of 1 with aldehydes and unsymmetrical ketones proceeded with moderate diastereoselectivity (re-face-adduct/si-face-adduct = 60/40-75/25).     

Gene Delivery into T-Cells Using Ternary Complexes of DNA,Lipofectamine, and Carboxy-Terminal Phenylalanine-Modified Dendrimers

T-cells play critical roles in various immune reactions, and genetically engineered T-cells have attracted attention for the treatment of cancer and autoimmune diseases. Previously, it is shown that a polyamidoamine dendrimer of generation 4 (G4), modified with 1,2-cyclohexanedicarboxylic anhydride (CHex) and phenylalanine (Phe) (G4-CHex-Phe), is useful for delivery into T-cells and their subsets. In this study, an efficient non-viral gene delivery system is constructed using this dendrimer. Ternary complexes are prepared using different ratios of plasmid DNA, Lipofectamine, and G4-CHex-Phe. A carboxy-terminal dendrimer lacking Phe (G3.5) is used for comparison. These complexes are characterized using agarose gel electrophoresis, dynamic light scattering, and ζpotential measurements. In Jurkat cells, the ternary complex with G4-CHex-Phe at a P/COOH ratio of 1/5 shows higher transfection activity than other complexes, such as binary and ternary complexes with G3.5, without any significant cytotoxicity. The transfection efficiency of the G4-CHex-Phe ternary complexes decreases considerably in the presence of free G4-CHex-Phe and upon altering the complex preparation method. These results suggest that G4-CHex-Phe promotes the cellular internalization of the complexes, which is useful for gene delivery into T-cells.     

Radical copolymerization of N‐phenylmaleimide and diene monomers in competition with diels–alder reaction

Radical copolymerization of N‐phenylmaleimide (PhMI) is carried out with various diene monomers including naturally occurring compounds and the copolymers are efficiently produced by the suppression of Diels–Alder reaction as the competitive side reaction. Diene monomers with an exomethylene moiety and a fixed s‐trans diene structure, such as 3‐methylenecyclopentene and 4‐isopropyl‐1‐methyl‐3‐methylenecyclohexene, exhibit high copolymerization reactivity to produce a high‐molecular‐weight copolymer in a high yield. The copolymerization of sterically hindered noncyclic diene monomers, such as 2,4‐dimethyl‐1,3‐pentadiene and 2,4‐hexadiene, also results in the formation of a high‐molecular‐weight copolymer in a moderate yield. The NMR spectroscopy reveals that the obtained copolymers consist of predominant 1,4‐repeating structures for the corresponding diene unit. The copolymers have excellent thermal stability, that is, an onset temperature of decomposition over 330 °C and a glass transition temperature over 130 °C. The copolymerization reactivity of these diene monomers is discussed based on the results of the DFT calculations. The efficient copolymer formation in competition with Diels–Alder addition is investigated under various conditions of the temperature, solvents, and initiators used for the copolymerization. © 2016 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2016 , 54, 3616–3625.