The energy-band parameters of cadmium arsenide and their variation with temperature and pressure

Using Kane's model for an HgTe-type inverted energy band structure along with available transport and optical data, various band parameters of Cd₃As₂ have been obtained at room and at low temperatures. Theoretical estimates of the variation of the energy gap at Γ as a function of temperature and pressure have also been obtained. These are found to be consistent with our band model and with our analysis of existing temperature and pressure data.     

Enantioselective synthesis of the alcohol moiety of dolabriferol

Dolabriferol is a marine polypropionate characterized by an unusual noncontiguous carbon backbone. The two polypropionate subunits are linked by an ester function. The protected alcohol moiety of dolabriferol was synthesized via the enzymatic desymmetrization of meso-(anti-anti)-2,4-dimethyl-1,3,5-pentanetriol.     

Effects of formalin and ethanol preservation on otolith delta18O stable isotope signatures

The use of preserved otoliths for stable isotope analysis assumes handling and preservation procedures do not alter the isotopic composition of the otolith. Otoliths from wild and hatchery-reared salmonids (brook charr, Salvelinus fontinalis, and Atlantic salmon, Salmo salar) were used to test for possible delta(18)O preservation effects in ethanol and formalin preservation experiments at varying temperatures. Analysis of variance (ANOVA) demonstrated a significant interaction effect between species and preservative during preservation. Possible causes for the observed effect are discussed in relation to species-specific differences in otolith chemistry related to growth and environment including: (1) chemical mechanisms of dissolution-recrystallisation involving the precipitation of secondary minerals within and at the otolith surface; (2) adsorption of ions at available binding sites on the otolith surface; and (3) isotopic exchange during otolith surface dissolution and/or reprecipitation processes. Differential occurrence of vaterite and aragonite in otoliths is believed to account for some of the observed effects as a result of otolith density differences. Isotopic exchange is also argued to cause much of the observed variation in species-specific preservation effects. Biologically, study findings imply that preserved otoliths should not be used for baseline paleoclimatic or individual fish thermal reconstructions, or the development of delta(18)O-fractionation equations, without the prior use of pilot studies to determine preservation effects.     

Personalized Treatment for Infantile Ascending Hereditary Spastic Paralysis Based on In Silico Strategies

Infantile onset hereditary spastic paralysis (IAHSP) is a rare neurological disease diagnosed in less than 50 children worldwide. It is transmitted with a recessive pattern and originates from mutations of the ALS2 gene, encoding for the protein alsin and involved in differentiation and maintenance of the upper motoneuron. The exact pathogenic mechanisms of IAHSP and other neurodevelopmental diseases are still largely unknown. However, previous studies revealed that, in the cytosolic compartment, alsin is present as an active tetramer, first assembled from dimer pairs. The C-terminal VPS9 domain is a key interaction site for alsin dimerization. Here, we present an innovative drug discovery strategy, which identified a drug candidate to potentially treat a patient harboring two ALS2 mutations: one truncation at lysine 1457 (not considered) and the substitution of arginine 1611 with a tryptophan (R1611W) in the C-terminus VPS9. With a protein modeling approach, we obtained a R1611W mutant model and characterized the impact of the mutation on the stability and flexibility of VPS9. Furthermore, we showed how arginine 1611 is essential for alsin’s homo-dimerization and how, when mutated to tryptophan, it leads to an abnormal dimerization pattern, disrupting the formation of active tetramers. Finally, we performed a virtual screening, individuating an already therapy-approved compound (MK4) able to mask the mutant residue and re-establishing the alsin tetramers in HeLa cells. MK4 has now been approved for compassionate use.     

Detailed structural investigation of the grafting of [Ta(=CHtBu)(CH2tBu)3] and [Cp*TaMe4] on silica partially dehydroxylated at 700 degrees C and the activity of the grafted complexes toward alkane metathesis

The reaction of [Ta(=CHtBu)(CH2tBu)3] or [Cp*Ta(CH3)4] with a silica partially dehydroxylated at 700 degrees C gives the corresponding monosiloxy surface complexes [([triple bond]SiO)Ta(=CHtBu)(CH2tBu)2] and [([triple bond]SiO)Ta(CH3)3Cp*] by eliminating a sigma-bonded ligand as the corresponding alkane (H-CH2tBu or H-CH3). EXAFS data show that an adjacent siloxane bridge of the surface plays the role of an extra surface ligand, which most likely stabilizes these complexes as in [([triple bond]SiO)Ta(=CHtBu)(CH2tBu)2([triple bond]SiOSi[triple bond])] (1a') and [([triple bond]SiO)Ta(CH3)3Cp*([triple bond]SiOSi[triple bond])] (2a'). In the case of [(SiO)Ta(=CHtBu)(CH2tBu)2([triple bond]SiOSi[triple bond])], the structure is further stabilized by an additional interaction: a C-H agostic bond as evidenced by the small J coupling constant for the carbenic C-H (JC-H = 80 Hz), which was measured by J-resolved 2D solid-state NMR spectroscopy. The product selectivity in propane metathesis in the presence of [([triple bond]SiO)Ta(=CHtBu)(CH2tBu)2([triple bond]SiOSi[triple bond])] (1a') as a catalyst precursor and the inactivity of the surface complex [([triple bond]SiO)Ta(CH3)3Cp*([triple bond]SiOSi[triple bond])] (2a') show that the active site is required to be highly electrophilic and probably involves a metallacyclobutane intermediate.     

Interaction of Functionalized Naphthalenophanes with Abasic Sites in DNA: DNA Cleavage,DNA Cleavage Inhibition,and Formation of Ligand–DNA Adducts

Ligands interacting with abasic (AP) sites in DNA may generate roadblocks in base-excision DNA repair (BER) due to indirect inhibition of DNA repair enzymes (e.g., APE1) and/or formation of toxic byproducts, resulting from ligand-induced strand cleavage or covalent cross-links. Herein, a series of 12 putative AP-site ligands, sharing the common naphthalenophane scaffold, but endowed with a variety of substituents, have been prepared and systematically studied. The results demonstrate that most naphthalenophanes bind to AP sites in DNA and inhibit the APE1-induced hydrolysis of the latter in vitro. Remarkably, their APE1 inhibitory activity, as characterized by IC₅₀ and K_I values, can be directly related to their affinity and selectivity to AP sites, as assessed by means of fluorescence melting experiments. On the other hand, the molecular design of naphthalenophanes has a crucial influence on their intrinsic AP-site cleavage activity (i.e., ligand-catalyzed β- and β,δ-elimination reactions at the AP site), as illustrated by the compounds either having an exceptionally high AP-site cleavage activity (e.g., 2,7-BisNP-S , 125-fold more efficacious than spermine) or being totally devoid of this activity (four compounds). Finally, the unprecedented formation of a stable covalent DNA adduct upon reaction of one ligand ( 2,7-BisNP-NH ) with its own product of the AP-site cleavage is revealed.     

Efficient Bayesian Inference for Generalized Bradley–Terry Models

The Bradley–Terry model is a popular approach to describe probabilities of the possible outcomes when elements of a set are repeatedly compared with one another in pairs. It has found many applications including animal behavior, chess ranking, and multiclass classification. Numerous extensions of the basic model have also been proposed in the literature including models with ties, multiple comparisons, group comparisons, and random graphs. From a computational point of view, Hunter has proposed efficient iterative minorization-maximization (MM) algorithms to perform maximum likelihood estimation for these generalized Bradley–Terry models whereas Bayesian inference is typically performed using Markov chain Monte Carlo algorithms based on tailored Metropolis–Hastings proposals. We show here that these MM algorithms can be reinterpreted as special instances of expectation-maximization algorithms associated with suitable sets of latent variables and propose some original extensions. These latent variables allow us to derive simple Gibbs samplers for Bayesian inference. We demonstrate experimentally the efficiency of these algorithms on a variety of applications.     

Formation of lactose-mannitol molecular alloys by solid state vitrification

In this paper, we report the possibility to form glassy molecular alloys (α-lactose)_1−x(mannitol)_x for x<0.5 by co-milling two crystalline powders of pure α-lactose and pure mannitol β. The results have been established by differential scanning calorimetry and by powder X-ray diffraction. The concentration dependence of the glass transition temperature is found to obey the Gordon Taylor rule expected for regular solutions. It is also shown that the milling of pure mannitol β (x=1) leads to a polymorphic transformation towards the metastable form α of mannitol.     

20 W passively cooled single-mode all-fiber laser at 2.8 μm

A maximum output power of 20.6 W at 2.825 μm from an erbium-doped all-fiber laser is reported, which we believe is the highest output power for this laser transition in single-mode operation. The slope efficiency of the passively cooled laser was up to 35.4% with respect to the absorbed pump power. Accounting for an estimated round-trip intracavity loss of 1.3 dB, we calculated a theoretical conversion efficiency of 39.5%, which is 15% higher than the Stokes efficiency of 34.3%. We believe this is the first experimental confirmation of the predicted pump energy recycling for this fiber laser. The narrow laser linewidth varied from 0.09 to 0.16 nm from low to maximum output power.