Exploring Amantadine Derivatives as Urease Inhibitors: Molecular Docking and Structure–Activity Relationship (SAR) Studies

This article describes the design and synthesis of a series of novel amantadine-thiourea conjugates (3a–j) as Jack bean urease inhibitors. The synthesized hybrids were assayed for their in vitro urease inhibition. Accordingly, N-(adamantan-1-ylcarbamothioyl)octanamide (3j) possessing a 7-carbon alkyl chain showed excellent activity with IC₅₀ value 0.0085 ± 0.0011 µM indicating that the long alkyl chain plays a vital role in enzyme inhibition. Whilst N-(adamantan-1-ylcarbamothioyl)-2-chlorobenzamide (3g) possessing a 2-chlorophenyl substitution was the next most efficient compound belonging to the aryl series with IC₅₀ value of 0.0087 ± 0.001 µM. The kinetic mechanism analyzed by Lineweaver–Burk plots revealed the non-competitive mode of inhibition for compound 3j. Moreover, in silico molecular docking against target protein (PDBID 4H9M) indicated that most of the synthesized compounds exhibit good binding affinity with protein. The compound 3j forms two hydrogen bonds with amino acid residue VAL391 having a binding distance of 1.858 Å and 2.240 Å. The interaction of 3j with amino acid residue located outside the catalytic site showed its non-competitive mode of inhibition. Based upon these results, it is anticipated that compound 3j may serve as a lead structure for the design of more potent urease inhibitors.     

Helix reversals as bad neighbors to liquid crystal organizations in cholesteric states and thermally reversible gels of poly(ALKYL isocyanates)

While the temperature dependence of the lyotropic cholesteric pitch of the single helical sense poly ((R)-2,6-dimethylheptyl isocyanate) is in line with theory, comparable data on this state produced by chiral doping of the lyotropic nematic state of poly(n-hexyl isocyanate) could suggest an interplay between the supramolecular chirality of the liquid crystal and the dynamic equilibrium of the left and right hand helical blocks in this otherwise racemic polyisocyanate. The exclusion of helix reversals, as undersireable kinks in the liquid crystal organization, could play a role in this effect. Such helix reversal exclusions can also explain the peculiar chiral optical changes associated with the thermally reversible gelation of poly(n-hexyl isocyanate) copolymers in hydrocarbon solvents. These gels likely arise by entering the broad biphasic region of the Flory phase diagram leading to the formation of liquid crystal aggregates.     

Simultaneous Determination of Metformin Hydrochloride, Cyanoguanidine and Melamine in Tablets by Mixed-Mode HILIC

A simple and specific hydrophilic interaction liquid chromatography (HILIC) procedure for the quantification of metformin hydrochloride (MFH) and its impurities in bulk pharmaceuticals and finished dosage forms has been developed. The method is based on hydrophilic interaction of the analytes with silica. The influence of the weaker solvent, acetonitrile, pH and the nature and ionic strength of the buffer was studied. Linearity range and percent recoveries for MFH were 100–400 μg mL⁻¹ and 100.62%, respectively. Good validation data were obtained for all compounds. The method separates impurities cyanoguanidine (CGD), melamine (MLN) and other degradation products with a run time of less than 13 min. Degradation studies involved thermal stress, hydrolysis at various pHs and chemical and photolytic oxidation.     

Probing the diffusion of vacuum ultraviolet (λ = 172 nm) induced oxidants by nanoparticles immobilization

Vacuum ultraviolet (VUV, λ = 172 nm) patterning of alkyl monolayer on silicon surface has been demonstrated with emphasis on the diffusion of VUV induced oxygen-derived active species, which are accountable for the pattern broadening. The VUV photons photo-dissociates the atmospheric oxygen and water molecules into the oxygen-derived active species (oxidants). These oxidants photo-oxidize the hexadecyl (HD) monolayer in VUV irradiated regions (Khatri et al., Langmuir. 24 (2008) 12077), as well as the little concentration of oxidants diffuses towards the masked areas. In this study, we performed VUV patterning at a vacuum pressure of 10 Pa to track the diffusion pathways for the oxidants with help of gold nanoparticles (AuNPs; ? = 10 nm) immobilization. At VUV irradiated sites AuNPs are found as uniformly distributed, but adjacent to the pattern boundary we observed quasi-linear arrays of AuNPs, which are determined by diffusion pathways of the oxidants. The diffusion of oxidants plays vital role in pattern broadening. The site selective anchoring of AuNPs demonstrates the utility of VUV photons for the construction of functional materials with microstructural architecture.     

Some extensions of the Kantorovich inequality and statistical applications

Kantorovich gave an upper bound to the product of two quadratic forms, (X′AX) (X′A⁻¹X), where X is an n-vector of unit length and A is a positive definite matrix. Bloomfield, Watson and Knott found the bound for the product of determinants |X′AX| |X′A⁻¹X| where X is n × k matrix such that X′X = I_k. In this paper we determine the bounds for the traces and determinants of matrices of the type X′AYY′A⁻¹X, X′B²X(X′BCX)⁻¹ X′C²X(X′BCX)⁻¹ where X and Y are n × k matrices such that X′X = Y′Y = I_k and A, B, C are given matrices satisfying some conditions. The results are applied to the least squares theory of estimation.     

Some probability inequalities connected with Schur functions

Bounds for several integrals (tail probabilities, for example) are established by showing that each integral is a Schur function.     

Electron-phonon scattering angles in copper

Electron-phonon scattering rates determined from the linewidths of acoustic open orbit resonances in copper have been analyzed by Monte-Carlo simulation, leading to numerical estimates of the average angle of scatter. The data suggest the dominance of transverse phonons as a scattering agent.     

Effective Debye temperature for a 2-dimensional crystal

Various studies have shown that the mean square amplitude of atoms on the surface of a crystal is almost twice that in the bulk. We believe that the results obtained by Kothari, using simple physical arguments for surface vibrations, were in error. We have also shown that the results could be explained by taking the contribution of bending waves in addition to surface vibrations for a 2-dimensional crystal.