Crystallization of Arthrobacter sp. strain 1C N-(1-D-carboxyethyl)-L-norvaline dehydrogenase and its complex with NAD+

The novel NAD+-linked opine dehydrogenase from a soil isolate Arthrobacter sp. strain 1C belongs to an enzyme superfamily whose members exhibit quite diverse substrate specificites. Crystals of this opine dehydrogenase, obtained in the presence or absence of co-factor and substrates, have been shown to diffract to beyond 1.8 ? resolution. X-ray precession photographs have established that the crystals belong to space group P21212, with cell parameters a = 104.9, b = 80.0, c = 45.5 ? and a single subunit in the asymmetric unit. The elucidation of the three-dimensional structure of this enzyme will provide a structural framework for this novel class of dehydrogenases to enable a comparison to be made with other enzyme families and also as the basis for mutagenesis experiments directed towards the production of natural and synthetic opine-type compounds containing two chiral centres.     

Novel search for heavy nu mixing from the beta+ decay of 38mK confined in an atom trap

A new technique, full neutrino momentum reconstruction, is used to set limits on the admixture of heavy neutrinos into the electron neutrino. We measure coincidences between nuclear recoils and positrons from the beta decay of trapped radioactive atoms and deduce the neutrino momentum. A search for peaks in the reconstructed recoil time-of-flight spectrum as a function of positron energy is performed. The admixture upper limits range from 4 x 10(-3) to 2 x 10(-2) and are the best direct limits for neutrinos (as opposed to antineutrinos) for the mass region of 0.7 to 3.5 MeV.     

Electronic Nose Differentiation between Quercus robur Acorns Infected by Pathogenic Oomycetes Phytophthora plurivora and Pythium intermedium

Identification of the presence of pathogenic oomycetes in infected plant material proved possible using an electronic nose, giving hope for a tool to assist nurseries and quarantine services. Previously, species of Phytophthora plurivora and Pythium intermedium have been successfully distinguished in germinated acorns of English oak Quercus robur L. Chemical compound analyses performed by HS-SPME/GC-MS (Headspace Solid-Phase Microextraction/Gas Chromatography–Mass Spectrometry) revealed the presence of volatile antifungal molecules produced by oak seedlings belonging to terpenes and alkanes. Compounds characteristic only of Phytophthora plurivora or Pythium intermedium were also found. Methylcarveol occurred when germinated acorns were infected with Pythium, while neophytadiene (isomer 2 and 3) occurred only when infected with Phytophthora. Moreover, isopentanol was found in acorns infected with Phytophthora, while in control, isopentyl vinyl ether was not observed anywhere else. Among the numerous volatile compounds, isopentanol only occurred in acorns infected with Phytophthora and methylcarveol in acorns infected with Pythium.     

Synthesis and isomer distribution of 2-alkyltropinones and 2-alkylgranatanones

Tropinone (8-methyl-8-azabicyclo[3.2.1]octan-3-one) metal (Li, Na, K, Mg) enolates were used to achieve α-alkylation. The reactions, regardless of the metal or conditions used, were low-yielding. N,N-Dimethylhydrazones of tropinone and granatanone (pseudopelletierine, 9-methyl-9-azabicyclo[3.3.1]nonan-3-one) were prepared and α-alkylated using n-butyllithium as the lithiating reagent. Lithium amides, including a polymer-supported lithium amide, were less effective. The reactions were modelled using DFT calculations at the B3LYP 6-31G(d) level and the CPCM solvent model, revealing that the face-selective alkylations of tropinone and granatanone hydrazones favoured the exo-isomers. Granatanone and α-isopropyl tropinone derivatives resisted typical mild hydrolytic hydrazone cleavage (aqueous trifluoroacetic acid) and required more forceful conditions (p-TsOH, boiling dioxane). Using the hydrazone alkylation strategy, 16 α-alkyl derivatives (benzyl, methyl, propyl, isopropyl, allyl, pentyl, heptyl, p-methoxybenzyl) were prepared in 52–90% yields overall. For the α-alkylated tropinones and granatanones (10 examples), the DFT calculations and experimental thermodynamic distributions in base catalysed equilibrations showed that except for the α-isopropyl derivatives, the endo-isomers were more stable than the exo-isomers and were the major products. For 2-isopropyltropinone, the bulky substituent favoured the exo (axial) position in the bicyclic skeleton. The thermodynamic distribution for the α,α′-dibenzyl tropinone isomers was also evaluated.     

Nonlinear and parametric coupled vibrations of the rotor-shaft system as fault identification symptom using stochastic methods

In the paper several stochastic methods for detection and identification of cracks in the shafts of rotating machines are proposed. All these methods are based on the Monte Carlo simulations of the rotor-shaft lateral-torsional-longitudinal vibrations mutually coupled by transverse cracks of randomly selected depths and locations on the shaft. For this purpose there is applied a structural hybrid model of a real cracked rotor-shaft. This model is characterized by a high practical reliability and great computational efficiency, so important for hundreds of thousands numerical simulations necessary to build databases used in solving the inverse problem, i.e. crack parameter identifications. In order to ensure a good identification accuracy, for creating the Monte Carlo samples of data points there are proposed special probability density functions for locations and depths of the crack. Such an approach helps in enhancing databases corresponding to the most probable faults of the rotor-shaft system of the considered rotor machine. In the presented study six different database sizes are considered to compare identification efficiency and accuracy of considered methods. A sufficiently large database enables us to estimate almost immediately (usually in less than one second) the crack parameters with precision that is in most of the cases acceptable in practice. Then, as a next stage, one of the proposed fast improvement algorithms can be applied to refine identification results in a reasonable time. The proposed methods seem to provide very convenient diagnostic tools for industrial applications.     

Measuring sticking and stripping in muon-catalyzed dt fusion with multilayer thin films

We propose a direct measurement of muon sticking to alpha particles in muon-catalyzed dt fusion at a high density. Exploiting the features of a multilayer thin-film target developed at TRIUMF, the sticking is determined directly by detection of charged fusion products. Experimental separation of initial sticking and stripping may become possible for the first time. Monte Carlo simulations, as well as preliminary results of test measurements are described.     

Ortho-para transition rate in mu-molecular hydrogen and the proton's induced pseudoscalar coupling gp

We report a measurement of the ortho-para transition rate in the p mu p molecule. The experiment was conducted at TRIUMF via the measurement of the time dependence of the 5.2 MeV neutrons from muon capture in liquid hydrogen. The measurement yielded an ortho-para rate Lambda op = (11.1 +/- 1.7 +/-(0.9)(0.6)) x 10(4) s(-1), which is substantially larger than the earlier result of Bardin et al. The result has striking implications for the proton's induced pseudoscalar coupling g(p), changing the value of g(p) obtained from the most precise ordinary muon capture measurement from 10.6 +/- 2.7 to 0.8 +/- 2.8, and from the sole radiative muon capture measurement from 12.2 +/- 1.1 to 10.6 +/- 1.2, bringing the latter result closer to theoretical predictions.