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1.
We present a method that formally calculates exact frequency shifts of an electromagnetic field for arbitrary changes in the refractive index. The possible refractive index changes include both anisotropic changes and boundary shifts. Degenerate eigenmode frequencies pose no problems in the presented method. The approach relies on operator algebra to derive an equation for the frequency shifts, which eventually turn out in a simple and physically sound form. Numerically the equations are well-behaved, easy implementable, and can be solved very fast. Like in perturbation theory a reference system is first considered, which then subsequently is used to solve another related, but different system. For our method precision is only limited by the reference system basis functions and the error induced in frequency is of second order for first-order basis set error. As an example we apply our method to the problem of variations in the air-hole diameter in a photonic crystal fiber. 相似文献
2.
Martin E. V. Pedersen Lars S. Rishøj Henrik Steffensen Sanshui Xiao Niels Asger Mortensen 《Optical and Quantum Electronics》2007,39(10-11):903-911
Slow-light enhanced optical detection in liquid-infiltrated photonic crystals is theoretically studied. Using a scattering-matrix approach and the Wigner–Smith delay time concept, we show that optical absorbance benefits both from slow-light phenomena as well as a high filling factor of the energy residing in the liquid. Utilizing strongly dispersive photonic crystal structures, we numerically demonstrate how liquid-infiltrated photonic crystals facilitate enhanced light–matter interactions, by potentially up to an order of magnitude. The proposed concept provides strong opportunities for improving existing miniaturized absorbance cells for optical detection in lab-on-a-chip systems. 相似文献
3.
4.
Quantal (E,tau) plots are constructed from the eigenvalues of the quantum system. We demonstrate that these representations display the periodic orbits of the classical system, including bifurcations and the transition from stable to unstable. (c) 1995 American Institute of Physics. 相似文献
5.
We present a novel algorithm of constrained, overdamped dynamics to study the long-time properties of peptides, proteins, and related molecules. The constraints are applied to an all-atom model of the molecule by projecting out all components of the nonbonding interactions which tend to alter fixed bond lengths and angles. Because the overdamped dynamical equations are first order in time, the constraints are satisfied by inversion of a banded matrix at each timestep, which is computationally efficient. Thermal effects are included through a Langevin noise term in the equation of motion. Because high-frequency components of the motion have been eliminated, the timestep of the algorithm is determined by the nonbonding forces, which are two to three orders of magnitude weaker than the bonding forces. Using polyalanine as a test example, we demonstrate that trajectories simulating a microsecond of motion can be run about 103 times faster than an equivalent molecular dynamics simulation. © 1994 by John Wiley & Sons, Inc. 相似文献
6.
Spin-exchange experiments are useful for improving the resolution and establishment of sequential assignments in solid-state NMR spectra of uniformly (15)N-labeled proteins oriented macroscopically in phospholipid bilayers. To exploit this advantage fully, it is crucial that the diagonal peaks in the two-dimensional exchange spectra are suppressed. This may be accomplished using the recent pure-exchange (PUREX) experiments, which, however, suffer from up to a threefold reduction of the cross-peak intensity relative to experiments without diagonal-peak suppression. This loss in sensitivity may severely hamper the applicability for the study of membrane proteins. In this paper, we present a two-dimensional exchange experiment (iPUREX) which improves the PUREX sensitivity by 50%. The performance of iPUREX is demonstrated experimentally by proton-mediated (15)N-(15)N spin-exchange experiments for a (15)N-labeled N-acetyl-L-valyl-L-leucine dipeptide. The relevance of exchange experiments with diagonal-peak suppression for large, uniformly (15)N-labeled membrane proteins in oriented phospholipid bilayers is demonstrated numerically for the G-protein coupled receptor rhodopsin. 相似文献
7.
A method for semi-automatic background estimation in energy-dispersive x-ray fluorescence spectra is outlined. Two cubic splines were investigated and the spline called the Butland interpolant was chosen for further investigation. Prior to the calculation of the spline, peak regions are set up, and suitable knots are defined outside the peak regions. To set up the peak regions, an automatic peak-search routine and a calibration equation are used. For a given peak, the latter relates the full width at half maximum (FWHM) to the peak centre. In turn, the size of the peak regions are defined by the FWHM multiplied by a constant given by the user. The method was tested on several types of spectra. It was found that the optimal size of the peak region decreased with increasing peak density. Reproducibility tests showed that the standard deviation of the summation of counts within a peak region and after background subtraction was less than would be expected from the counting statistics. 相似文献
8.
The reaction of [Cr(NCCH(3))(6)](2+) with dioxygen in acetonitrile (MeCN) solution acidified with HBF(4) gave red crystals of the binuclear complex [(CH(3)CN)(5)Cr(OH)Cr(NCCH(3))(5)](BF(4))(5) (1). From the X-ray crystal structure of 1, the Cr-O-Cr angle was found to be 147.5(2) degrees. Magnetic susceptibility measurements of 1 showed an antiferromagnetic coupling between the two chromium(III) centers with a triplet energy J = 35.9(1) cm(-1). On redissolution of 1 in MeCN, the hydroxo bridge was deprotonated, and a green solution of the complex [(CH(3)CN)(5)CrOCr(NCCH(3))(5)](4+) formed. The electronic absorption spectrum of this solution is very similar to the spectrum of the classical complex [(H(3)N)(5)CrOCr(NH(3))(5)](4+) with intense bands in the UV and near-UV region. From the temperature dependence of the absorption spectrum near 12900 cm(-1), the triplet energy J was found to be 1067(19) cm(-1). The acidity of the hydroxo bridge in 1 is very high with an acid dissociation constant K(a) > 1 M. 相似文献
9.
Human beta2-glycoprotein I (beta2gpI) is a phospholipid and heparin binding plasma glycoprotein involved in autoimmune diseases characterized by blood clotting disturbances (thrombosis) together with the occurrence of autoantibodies against beta2gpI. With the final goal of assessing autoantibody influence on binding interactions of beta2gpI we have studied the development of capillary electrophoresis (CE)-based assays for interactions of negatively charged ligands with beta2gpI. In the development of suitable conditions for analysis at neutral pH of this basic protein (pI about 8) we found the pH hysteresis behavior of fused silica surfaces useful since the protonated surface after an acid pre-wash counteracted protein adsorption efficiently in contrast to more laborious procedures including acrylamide/dimethylacrylamide coatings that did not permit analysis of this particular protein. This simple approach made estimates of heparin-beta2gpI interactions possible and the principle was shown also to work for detection of betagpI binding to anionic phospholipids. Utilizing the pH hysteresis effect may be a simple solution to the adsorption problems often encountered in analyses of proteins by CE. 相似文献
10.
Zamfir AD Lion N Vukelic Z Bindila L Rossier J Girault HH Peter-Katalinic J 《Lab on a chip》2005,5(3):298-307
A thin chip polymer-based microsprayer has been coupled to a hybrid quadrupole time-of-flight mass spectrometer (QTOF MS) and introduced in carbohydrate research. The feasibility of the approach is demonstrated for mapping, sequencing and structural elucidation of glycoconjugates originating from human body fluids and tissues such as a glycopeptide mixture from normal human urine and an isolated and purified GT1 ganglioside fraction from normal adult human brain. The optimization procedure required by each glycoconjugate category is described and the advantages of the system in terms of flexibility and adaptability to QTOF MS, stability of the ESI MS signal, carbohydrate ionization and sequencing, sensitivity, speed of analysis and sample consumption are discussed. 相似文献