Regioselective synthesis of virazole using benzyl cyanoformate as a synthon

An antiviral nucleoside or virazole was synthesized efficiently and regioselectively starting with benzyl cyanoformate.     

An efficient conversion of 1-abietic acid to (+)−3-deoxyaphidicolin

The first total synthesis of (+)?3-deoxyaphidicolin, a selective inhibitor of eukaryotic DNA polymerase α, has been completed efficiently and stereoselectively starting from 1-abietic acid.     

Synthesis and thermal decomposition of lanthanide hexacyanochromate(iii) complexes,Ln[Cr(CN)6]·nH2O (Ln=La-Lu; n=3, 4)

New solid complex of nitrilotriacetic acid and bismuth trichloride was synthesized by a solid phase reaction of nitrilotriacetic acid and bismuth trichloride at room temperature. The composition of the sample is BiCl₃[N(CH₂COOH)₃]_2.5. The crystal structure of the complex belongs to triclinic system with the lattice parameters: α=0.7849 nm, β=0.9821 nm, χ=2.0021 nm, α=96.50°, β=98.76° and γ=90.49°. The far-infrared spectra show the bonding between the Bi ion and N atom of nitrilotriacetic acid. The thermal analysis also demonstrates the complex formation between the bismuth ion and nitrilotriacetic acid. The gaseous pyrolysis product and the final residue in the thermal decomposition process are determined to check the thermal decomposition reaction. This revised version was published online in August 2006 with corrections to the Cover Date.     

Important role of molecular permanent dipoles of the Alq3/Al interface studied from first-principles

We have studied the atomic geometries and electronic properties of the tris-(8-hydroxyquinoline) aluminum (Alq₃)/Al interface using density functional calculations. The calculated interface dipoles agree reasonably well with the experiments and the origin of the interface dipole formation mainly comes from the alignment of the permanent dipoles of Alq₃ molecules. The HOMO levels of the Alq₃ molecules significantly depend on the orientation of the molecular permanent dipoles and the interfacial gap state observed by experiments is ascribed to the co-existence of the two orientations of the molecular dipoles.     

Cyclopolymerization of diallylamine derivatives in dimethyl sulfoxide

Diallyl quaternary ammonium chlorides, bromides and N-alkyldiallylamine hydrochlorides were polymerized with ammonium persulfate (APS) in dimethyl sulfoxide (DMSO). The dependences of yield and molecular weight of polymers on polymerization conditions were examined and quaternary ammonium chlorides were found to have better polymerizability than bromides. The poly(diallyl quaternary ammonium chlorides) obtained with APS—DMSO system are expected to have quite high molecular weights, as determined from the measurement of limiting viscosity numbers of the polymers in NaCl aqueous solution.     

Guest shape-responsive fitting of porous coordination polymer with shrinkable framework

In situ synchrotron X-ray powder diffraction patterns of porous coordination polymers [[Cu(2)(pzdc)(2)(bpy)].G] have been measured (pzdc = pyrazine-2,3-dicarboxylate, bpy = 4,4'-bipyridine) (where G = H(2)O for CPL-2 superset H(2)()O, G = benzene for CPL-2 superset benzene, and G = void for the apohost). The structures of apohost and CPL-2 superset benzene were determined from Rietveld analysis. Adsorption of benzene in the channels induced a remarkable contraction in the crystal (b axis; 6.8%, volume; 4.9%), although the channels were occupied by the benzene molecules. This crystal transformation provides a new pore structure that is well suited for benzene molecules, and we denote it as a "shape-responsive fitting" transformation. This type of pore gives rise to a new guideline: frameworks can be composed of flexible motifs that are linked via strong bond and/or stiff motifs that are connected via weaker bonds.     

Structural variety of membrane permeable peptides

Peptide-mediated protein delivery into living cells has been attracting our attention. Among the peptides that have been reported to have carrier activity, the one from the human immunodeficient virus (HIV)-1 Tat has been most often used for the introduction of exogenous macromolecules into cells. We have shown that not only the Tat peptide, but also various arginine-rich peptides showed very similar characteristics in translocation, and the possible presence of ubiquitous internalization mechanisms among the arginine-rich peptides has also been suggested. These arginine-rich peptides includes ones derived from HIV-1 Rev and flock house virus coat proteins. The linear- and branched-chain peptides containing approximately 8 residues of arginine also show a similar ability. In this review, we present the structural variety of membrane permeable peptides and provide a survey of the findings on the translocation of these peptides through the cell membranes.     

Preparation and properties of rare-earth containing oxide fluoride glasses

The preparation of the rare earth containing oxide fluoride glasses LnF₃ (Ln; Y through Lu)-BaF₂-AlF₃-GeO₂ in which the nominal content of LnF₃ reached 60 mol% in maximum and their basic properties such as density, refractive index and glass transition temperature were investigated and summarized in detail. Especially, in order to discuss the local structure around the rare earth ion in the glass, the Judd-Ofelt analysis (discussion with Ω parameters) of the HoF₃-BaF₂-AlF₃-GeO₂ glasses was carried out. The unique fluorescent behavior and the magnetic properties of LnF₃-BaF₂-AlF₃-GeO₂ glasses (Ln = Tb and/or Sm) were also studied.     

DNA-bleomycin interaction: Nucleotide sequence-specific binding and cleavage of DNA by bleomycin

Biosynthetic intermediates and synthetic analogues of bleomycin (BLM) have been investigated for their metal binding, dioxygen activation, and DNA cleavage. Molecular O₂ was activated by the Fe(II) complex of a synthetic model ligand. Nucleotide sequence specificities in DNA cleavage by the BLM-Fe(II) and deglyco-BLM-Fe(II) complexes were almost identical. It has been shown that (1) the β-aminoalanine-pyrimidine-β-hydroxyhistidine portion of BLM is essential for the metal binding and dioxygen activation and (2) the bithiazole moiety contributes to the specific binding to guanine base of DNA.