Anisotropic friction model of DNA electrophoresis in polymer solutions: Comparison with direct observations

The electrophoresis of DNA chains in uncrosslinked polymer solutions with a Brownian dynamics simulation with an anisotropic friction tensor was analyzed. According to the degree of anisotropy, three types of migration behavior are obtained: fluctuation without or with periodicity between U‐shaped and compact conformations, or migration with linear conformation. We found good agreement between our simulation results and the direct observations of DNA by fluorescence microscopy. © 2003 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 41: 1316–1322, 2003     

Crystal structure of the clathrate of 5,12-dihydro-5,12-o-benzenonaphthacene-1,4-dione with benzene (2:1).

In the crystal of the title compound, the quinone fragment of the host (1) participates in weak D-A interactions with a neighboring naphthalene moiety of 1 and with the guest molecule via fairly short intermolecular face-to-face contacts. An intermolecular electrostatic interaction between a quinone-oxygen atom and a neighboring quinone ring is suggested by short O...C contacts. There exist several C-H...O hydrogen bonds, one of which seems to contribute to the formation of a centrosymmetric dimer of 1.     

Overproduction of riboflavin by anArthrobacter sp. mutant resistant to 5-fluorouracil

Effects of pH and dissolved oxygen concentration on batchwise riboflavin production by a 5-fluorouracil (5-FU)-resistant mutant ofArthrobacter sp. were investigated. The reaction was carried out in a jar fermentor. The optimal pH of culture medium was around 7.3. Dissolved oxygen concentration was almost constant during fermentation at 600 rpm of agitation rate. Production of riboflavin reached a maximum of 160 mg/L after 70 h fermentation under the agitation rate of 600 rpm, aeration rate of 1.0 L/min, and pH 7.0.     

Simultaneous determination of calcium and magnesium by using a flow-injection system with simultaneous injection of two sample plugs and a masking agent plug

A flow-injection system is described for the simultaneous determination of calcium and magnesium with simultaneous injection of two sample plugs and a masking agent plug and with a single detector. The system utilizes the simultaneous injection of an ethylene glycol-bis(2-aminoethylether)-N,N,N',N'-tetra-acetic acid plug and two small sample plugs into the same carrier stream and which are merged downstream with 3,3'-bis[N,N-bis(carboxymethyl)aminomethyl)]-o-cresolphthalein solution for spectrophotometric determination of calcium and magnesium. The results for the analysis of natural waters by the proposed method correspond well with those obtained by the conventional titration method with ethylenediaminetetra-acetic acid, and showed good reproducibility. The rate of analysis is about 15 samples/hr.     

A catalytic chemical vapor deposition synthesis of double-walled carbon nanotubes over metal catalysts supported on a mesoporous material

Double-walled carbon nanotubes (DWNTs) have been synthesized by catalytic chemical vapor deposition (CCVD) over supported metal catalysts decomposed from Fe(CH₃COO)₂ and Co(CH₃COO)₂ on mesoporous silica. Bundles of tubes with relatively high percentage of DWNTs, in areas where tubular layered structures could be clearly resolved, have been observed by transmission electron microscopy (TEM). In other areas, crystal-like alignment of very uniform DWNTs was observed for the first time, suggesting that mesoporous silica might play a templating role in guiding the initial nanotube growth. In addition, compatible with nano-electronics research, bridging of catalytic islands by DWNTs has also been demonstrated.     

Ca0.8Y2.4Sn0.8O6, a quaternary oxide with mixed occupations of Ca/Y and Y/Sn

A new quaternary oxide, calcium yttrium stannate, Ca_0.8Y_2.4Sn_0.8O₆, is isostructural with Mg₃TeO₆ (trigonal, R). The empirical formula can be expressed as (Ca_0.2667Y_0.7333)₆(Y_0.4Sn_0.6)SnO₁₂. The Ca/Y site has a distorted coordination octa­hedron of O atoms, with Ca/Y—O distances ranging from 2.227 (3) to 2.350 (3) Å, while the octa­hedra of O atoms that coordinate to the Sn and Y/Sn sites are nearly regular, with an Sn—O distance of 2.066 (2) Å and a Y/Sn—O distance of 2.147 (3) Å.     

Thick Silicate Film by an Interfacial Polymerization

A thick silica gel film, corresponding to the glass film of 10–20 micron in thickness, has been formed at the interface between two immiscible liquids, hexane and water, using E-40, a partially polymerized silicon alkoxide, as the precursor. The film formation was possible using both acid- and base-catalyzed water, but was greatly dependent on the type of catalyst. Only the trace of a film was observed for the system catalyzed with a strong electrolyte such as HCl, HNO₃ or NaOH, while a gel film, corresponding to the glass film of several to 10 micron in thickness was formed with a weak electrolyte such as ammonia, organic acid like acetic acid, citric acid, etc., of similar pH value. The direct introduction of organic base catalyst like triethylamine in hexane was much more effective than the use of ammonia water, suggesting that the polymerization of E-40 to form a gel film takes place in the organic phase, where water molecules, as well as undissociated ammonia or organic acids, can diffuse in.     

Continuous flow system for the determination of trace vanadium in natural waters utilizing in-line preconcentration/separation coupled with catalytic photometric detection

A sensitive and rapid method is presented for the determination of vanadium at ng to sub-ng ml(-1) levels in natural waters, in which in-line preconcentration/separation is directly coupled with catalytic detection of vanadium in a flow-injection system. Vanadium was adsorbed on a small column packed with Sephadex G-25 gel and desorbed with a small volume of 0.010 M HCl. The catalytic action of vanadium on the oxidation of chromotropic acid (1,8-dihydroxy-3,6-naphthalenedisulphonic acid) by bromate in pH 3.8 buffered media was used in the sensitive determination of vanadium. Effective preconcentration/separation of trace vanadium can be achieved from Fe(III), Cu(II) and a large excess of sodium chloride in seawater sample. A linear calibration using a 5 m sample loop was obtained for vanadium in the range 0-2.5 ng ml(-1). The limit of detection was 0.02 ng ml(-1) and the relative standard deviation was 1.2% for 1.0 ng ml(-1) vanadium (n=5). The present FIA system is rapid and sensitive and can be readily applied to river water and coastal seawater samples.     

Uniaxial alignment of the smallest diamagnetic susceptibility axis using time-dependent magnetic fields

A diamagnetic particle with magnetic susceptibilities chi3 < chi2 = chi1 < 0 was subjected to a rotating magnetic field to obtain an alignment of the chi3 axis (the smallest susceptibility axis) in the direction perpendicular to the plane of the rotating magnetic field. A polymer short fiber, whose fiber axis coincides with the chi3 axis, was suspended in a fluid with the same density, and then a rotating magnetic field generated by a rotation of a pair of permanent magnets was applied. The fiber axis, rotating following the applied field, finally ended up with an alignment perpendicular to the plane of the rotating magnetic field. The experimental data on the time course of the alignment was in good agreement with the numerical calculation based on the equation of rotation.     

Quantitative analysis of photoelectron angular distribution of single-domain organic monolayer film: NTCDA on GeS(0 0 1)

Angle-resolved photoelectron spectra were measured for a single-domain monolayer film of naphthalene-1,4,5,8-tetracarboxylic dianhydride (NTCDA) prepared on a cleaved GeS(0 0 1) surface using synchrotron radiation. The observed photoelectron angular distributions were analyzed by a calculation using the single-scattering approximation combined with molecular orbital calculation. With the help of the low-energy electron diffraction pattern, the structure of the NTCDA monolayer on GeS(0 0 1) was estimated quantitatively.