Electron spin polarization in a three-electron spin system. An application to bacterial photosynthesis

Calculations on a system consisting of three electron spins and one nuclear spin are presented and their implications for bacterial photosynthesis discussed. Comparison with experimental measurements of electron spin polarization in pre-reduced photosynthetic reaction centres leads to conclusion that the exchange interaction within the primary radical pair is positive and less than 0.8 mT when the g values of the photoinduced radicals are taken to be those measured for the isolated radical species.     

Effects of surfactants on the photosensitized production of tyrosine radicals studied by photo-CIDNP

The influence of the surfactants sodium dodecyl sulphate, cetyltrimethyl-ammonium bromide and triton X-100 on the photochemically induced dynamic nuclear polarization (CIDNP) of N-acetyl tyrosine has been investigated. Three photosensitizers were used to generate polarization: thionin, eosin Y and flavin mononucleotide. 600 MHz 1H photo-CIDNP experiments, supported by laser flash photolysis transient absorption measurements, indicate that the neutral triton surfactant has no influence on the nuclear polarization, but that the other two, charged, amphiphiles affect the photochemistry in a variety of ways, depending on the surfactant concentration and the identity of the sensitizer.     

The potential role of ultrasound in differentiating solid and cystic swellings of the true vocal fold

This study was designed to investigate the potential role of ultrasound in the diagnosis of cysts of the true vocal fold. Materials and Methods: Grayscale ultrasound of the larynx was carried out in 29 patients with a swelling of the true vocal fold and dysphonia. The findings were then compared with those at subsequent microlaryngoscopy, in the majority of cases. Results and Conclusions: Whereas preoperative laryngeal ultrasound correctly predicted the surgical findings of a cystic lesion in only 5 of 11 cases, it correctly identified that no cyst was present in 15 of 16 instances when this had been queried. This study suggests that ultrasound may have some role in investigation of unilateral vocal fold pathology, but that further fine-tuning of the technique may be necessary.     

19F NMR studies of the native and denatured states of green fluorescent protein

Biosynthetic preparation and (19)F NMR experiments on uniformly 3-fluorotyrosine-labeled green fluorescent protein (GFP) are described. The (19)F NMR signals of all 10 fluorotyrosines are resolved in the protein spectrum with signals spread over 10 ppm. Each tyrosine in GFP was mutated in turn to phenylalanine. The spectra of the Tyr --> Phe mutants, in conjunction with relaxation data and results from (19)F photo-CIDNP (chemically induced dynamic nuclear polarization) experiments, yielded a full (19)F NMR assignment. Two (19)F-Tyr residues (Y92 and Y143) were found to yield pairs of signals originating from ring-flip conformers; these two residues must therefore be immobilized in the native structure and have (19)F nuclei in two magnetically distinct positions depending on the orientation of the aromatic ring. Photo-CIDNP experiments were undertaken to probe further the structure of the native and denatured states. The observed NMR signal enhancements were found to be consistent with calculations of the HOMO (highest occupied molecular orbital) accessibilities of the tyrosine residues. The photo-CIDNP spectrum of native GFP shows four peaks corresponding to the four tyrosine residues that have solvent-exposed HOMOs. In contrast, the photo-CIDNP spectra of various denatured states of GFP show only two peaks corresponding to the (19)F-labeled tyrosine side chains and the (19)F-labeled Y66 of the chromophore. These data suggest that the pH-denatured and GdnDCl-denatured states are similar in terms of the chemical environments of the tyrosine residues. Further analysis of the sign and amplitude of the photo-CIDNP effect, however, provided strong evidence that the denatured state at pH 2.9 has significantly different properties and appears to be heterogeneous, containing subensembles with significantly different rotational correlation times.     

Microphase separation induced by interfacial segregation of isotropic, spherical nanoparticles

In a recent experiment by Chung et al. [Nano Lett. 5, 1878 (2005)] and simulation by Stratford et al. [Science 309, 2198 (2005)] on immiscible blends containing nanoscale particles, it was shown that the phase separation of the two polymers can be prevented as a result of the aggregation of the nanoparticles at the interfaces between the two polymers. Motivated by these studies, we performed large scale systematic simulations, based on the dissipative particle dynamics approach, on immiscible binary (A-B) fluids containing moderate volume fractions of isotropic nanoscale spherical particles N. The nanoparticles preferentially segregate at the interfaces between the two fluids if the pairwise interactions between the three components are such that chi(AB)>/chi(AN)-chi(BN)/. We find that at later times, the average domain size saturates to a value, L approximately R(N)/phi(N), where R(N) and phi(N) are the radius and volume fraction of the nanoparticles, respectively. For small nanoparticles, however, full phase separation is observed.     

1H and 13C hyperfine coupling constants of the tryptophanyl cation radical in aqueous solution from microsecond time-resolved CIDNP

Relative values of the 1H and 13C isotropic hyperfine couplings in the cationic oxidized tryptophan radical TrpH*+ in aqueous solution are determined. The data are obtained from the photo-CIDNP (chemically induced dynamic nuclear polarization) enhancements observed in the microsecond time-resolved NMR spectra of the diamagnetic products of photochemical reactions in which TrpH*+ is a transient intermediate. The method is validated using the tyrosyl neutral radical Tyr*, whose 1H and 13C hyperfine couplings have previously been determined by electron paramagnetic resonance spectroscopy. Good agreement is found with hyperfine coupling constants for TrpH*+ calculated using density functional theory methods but only if water molecules are explicitly included in the calculation.     

Mechanisms of reactions of flavin mononucleotide triplet with aromatic amino acids

Chemical reactions between the photoexcited triplet state of flavin mononucleotide and the aromatic amino acids, N-acetyl tryptophan (TrpH), N-acetyl tyrosine (TyrOH), and N-acetyl histidine (HisH) in aqueous solution have been studied in the pH range 2-12. Across the whole pH range, the principal mechanism of reaction of both TrpH and TyrOH is shown to be electron transfer. For HisH, the mechanism and rate of the reaction depend on the protonation state of the reactants. In acidic conditions (pH < 4), reaction does not occur. At 4 < pH < 11, the reaction proceeds via hydrogen atom abstraction with a rate constant varying from 3.0 x 10(6) to 2.5 x 10(8) M(-1) s(-1). In extremely basic solution (pH > 12) the mechanism switches to electron transfer.     

Palladium‐Catalyzed Direct CH Functionalization of Benzoquinone

A direct Pd‐catalyzed C? H functionalization of benzoquinone (BQ) can be controlled to give either mono‐ or disubstituted BQ, including the installation of two different groups in a one‐pot procedure. BQ can now be directly functionalized with aryl, heteroaryl, cycloalkyl, and cycloalkene groups and, moreover, the reaction is conducted in environmentally benign water or acetone as solvents.     

Nanospheres in phase-separating multicomponent fluids: a three-dimensional dissipative particle dynamics simulation

The dynamics of phase separation of three-dimensional fluids containing nanospheres, which interact preferentially with one of the two fluids, is studied by means of large-scale dissipative particle dynamics simulations. We systematically investigated the effect of volume fraction, radius, and mass of the nanoparticles on both kinetics and morphology of the binary mixture. We found that nanospheres lead to a reduction of domain growth which is intensified as their volume fraction is increased for a given radius of nanoparticles, or as the nanoparticles radius is decreased for a given volume fraction. Up to moderate volume fractions of nanoparticles, the growth law, however, is found to be identical to that pure binary fluids, i.e., R(t) approximately t(n), with n=1. For relatively high volume fractions of nanoparticles, a diffusive growth regime was detected. The crossover to the slower growth regime as the nanoparticles volume fraction is increased or their radius is decreased is associated with the crystallization of the nanospheres within the preferred component. These results are qualitatively in good agreement with previous two-dimensional simulations using molecular dynamics [M. Laradji and G. MacNevin, J. Chem. Phys. 119, 2275 (2003)] and a time-dependent Ginzburg-Landau model [M. Laradji, J. Chem. Phys. 120, 9330 (2004)], as well as recent experiments.     

Influence of dipolar interactions on radical pair recombination reactions subject to weak magnetic fields

Monte Carlo simulations of the effects of weak magnetic fields on the recombination of interacting radical pairs undergoing free diffusion in solution have been performed, with the aim of determining the influence on the low field effect of the magnetic dipolar coupling between the radicals. The suppression of singlet-triplet interconversion in the radical pair by the dipolar interaction is found to be pronounced at magnetic field strengths comparable to the hyperfine interactions in the radicals, to the extent that the low field effect is completely abolished. The averaging of the dipolar coupling by the translational diffusion of the radicals around one another is relatively efficient in the presence of strong magnetic fields but becomes ineffective in weak applied fields where the strength of the dipolar interaction is independent of the orientation of the inter-radical vector. Low field effects are only likely to be observed if the motion of the radical pair is restricted in some way so as to increase the likelihood that, having separated to the large distance required for the dipolar interaction to have a negligible effect, the radicals subsequently encounter and have the opportunity to recombine.