Metal-assisted red light-induced DNA cleavage by ternary L-methionine copper(II) complexes of planar heterocyclic bases

Ternary copper(II) complexes [Cu(l-met)B(Solv)](ClO4) (1-4), where B is a N,N-donor heterocyclic base like 2,2'-bipyridine (bpy, 1), 1,10-phenanthroline (phen, 2), dipyrido[3,2-d:2',3'-f]quinoxaline (dpq, 3) and dipyrido[3,2-a:2'],3'-c]phenazene (dppz, 4), are prepared and their DNA binding and photo-induced DNA cleavage activity studied (L-Hmet =L-methionine). Complex 2, structurally characterized by X-ray crystallography, shows a square pyramidal (4 + 1) coordination geometry in which the N,O-donor L-methionine and N,N-donor heterocyclic base bind at the basal plane and a solvent molecule is coordinated at the axial site. The complexes display a d-d band at approximately 600 nm in DMF and exhibit a cyclic voltammetric response due to the Cu(II)/Cu(I) couple near -0.1 V in DMF-Tris-HCl buffer. The complexes display significant binding propensity to the calf thymus DNA in the order: 4(dppz) > 3(dpq) > 2(phen> 1(bpy). Control cleavage experiments using pUC19 supercoiled DNA and distamycin suggest major groove binding for the dppz and minor groove binding for the other complexes. Complexes 2-4 show efficient DNA cleavage activity on UV (365 nm) or red light (632.8 nm) irradiation via a mechanistic pathway involving formation of singlet oxygen as the reactive species. The DNA cleavage activity of the dpq complex is found to be significantly more than its dppz and phen analogues.     

DNA photocleavage and anticancer activity of terpyridine copper(II) complexes having phenanthroline bases

Copper(II) complexes [Cu(ph-tpy)(B)](ClO₄) (1–3), where ph-tpy is (4′-phenyl)-2,2′:6′,2″-terpyridine and B is N,N-donor phenanthroline base, viz. 1,10-phenanthroline (phen, 1), dipyridoquinoxaline (dpq, 2), and dipyridophenazine (dppz, 3), were prepared and characterized from analytical and spectral data. Complex 1, characterized by X-ray crystallography, shows a distorted square-pyramidal (4 + 1) CuN₅ coordination geometry having the tridentate ph-tpy ligand at the basal plane and bidentate phen bound to the axial-equatorial sites. The complexes display a d–d band near 650 nm in aqueous DMF. The complexes are avid binders to calf thymus DNA giving the binding order: 3 (dppz) > 2 (dpq) > 1 (phen). The dpq and dppz complexes show photo-induced DNA cleavage activity in red light via photo-redox pathway forming hydroxyl radicals. The cytotoxicity of the dppz complex 3 was studied by MTT assay in HeLa cancer cells. The IC₅₀ values are 3.7 and 12.4 μM in visible light of 400–700 nm and dark, respectively.     

Synthesis, characterization, redox property and biological activity of Ru(II) carbonyl complexes containing O,N-donor ligands and heterocyclic bases

Stable ruthenium(II) carbonyl complexes having the general composition [RuCl(CO)(PPh3)(B)(L)] (where B=PPh3, pyridine, piperidine or morpholine; L=anion of bidentate Schiff bases (Vanmet, Vanampy, Vanchx)) were synthesized from the reaction of [RuHCl(CO)(PPh3)2(B)] with bidentate Schiff base ligands derived from condensation of o-vanillin with primary amines such as methylamine, 2-aminopyridine and cyclohexylamine. The new complexes were characterized by elemental analysis, IR, UV-Vis and 1H NMR spectral data. The redox property of the complexes were studied by cyclic voltammetric technique and the stability of the complexes towards oxidation were related to the electron releasing or electron withdrawing ability of the substituent in the phenyl ring of o-vanillin. An octahedral geometry has been assigned for all the complexes. In all the above reactions, the Schiff bases replace one molecule of PPh3 and hydride ion from the starting complexes, which indicate that the Ru-N bonds present in the complexes containing heterocyclic nitrogen bases are stronger than the Ru-P. The Schiff bases and their ruthenium(II) complexes have been tested in vitro to evaluate their activity against bacteria, viz., Staphylococcus aureus (209p) and E. coli (ESS 2231).     

DNA binding and oxidative cleavage activity of ternary (l-proline)copper(II) complexes of heterocyclic bases

Ternary copper(II) complexes [Cu(l-pro)(B)(H₂O)](NO₃) (1, 2) where l-pro = l-proline, B is a N,N-donor heterocyclic base, viz. 2,2′-bipyridine (bpy, 1), 1,10-phenanthroline (phen, 2), are synthesized, characterized, and their DNA binding and cleavage activity studied. The bpy complex (1) is structurally characterized by single-crystal X-ray crystallography. The complexes show the presence of a distorted square-pyramidal (4 + 1) CuN₃O₂ coordination geometry. Complex [Cu(l-pro)(bpy)(H₂O)](NO₃) (1) crystallizes in the triclinic space group P1 with unit cell parameters: a = 7.082(3) Å, b = 10.483(5) Å, c = 11.581(5) Å, α = 89.700(7)°, β = 83.488(8)°, γ = 84.109(8)° and V = 849.7(7) Å³. The one-electron paramagnetic complexes display a d–d band near 600 nm in water and show a cyclic voltammetric response due to Cu(II)/Cu(I) couple near 0.1 V (versus SCE) in Tris–HCl buffer–0.1 M KCl. Binding interactions of the complexes with calf thymus (CT) DNA have been investigated by emission, absorption, viscosity and DNA thermal denaturation studies. The phen complex displays significant binding propensity to the CT DNA giving an order: 2 (phen)  1 (bpy). The bpy complex does not show any apparent binding to the DNA and hence poor cleavage efficiency. Complex 2 shows efficient oxidative cleavage of SC-DNA in the presence of 3-mercaptopropionic acid (MPA) involving hydroxyl radical species as evidenced from the control data showing inhibition of DNA cleavage in the presence of DMSO and catalase.     

Synthesis,characterization and function of ternary copper(II) complexes

Ternary complexes of glycine, alanine, -alanine, serine and ethylenediamine with copper iminodiacetate have been prepared and characterized by their i.r., u.v.-vis. and e.s.r. spectra. The data suggest that the complexes possess axial symmetry and a distorted octahedral configuration in aqueous solution. The H2O molecule on the axial copper site can be replaced by O2–. The bonding parameters, which fall between 0.84 and 0.88, indicate that the bonds between copper(II) and the ligands possess more ionic character. The ternary complex containing serine displays the highest catalytic activity in dismutation of the superoxide radical O2–. This activity may be explained on the basis of the stabilization of CuII-O2– by hydrogen bonding.     

Effect of the nature of non-bridging donor atoms on the structure and magnetic properties of binuclear copper(II) complexes with heterocyclic azomethyne ligands

Journal of Structural Chemistry - Pyrazolate bridging binuclear copper(II) complex with a heterocyclic azomethyne ligand (a condensation product of 1,3-diaminopropanol-2 with...     

Synthesis,characterization and crystal structure of ternary chloroacetate,dichloroacetate and trichloroacetate copper(II) complexes

Three binuclear ternary copper(II) chloroacetate complexes with OP(OMe)₃ were prepared, and the configurations of the copper(II) dichloroacetate and trichloroacetate complexes were converted from a square-planar structure into a binuclear cage structure during the reaction. The crystal structure of Cu₂(ClCH₂CO₂)₄[OP(OMe)₃]₂ were determined by single-crystal X-ray diffraction. The i.r. spectra show that the carboxylate groups behave as bridging bidentate ligands in Cu₂(ClCH₂CO₂)₄(H₂O)₂ (1), Cu₂(ClCH₂CO₂)₄[OP(OMe)₃]₂ (4), Cu₂(Cl₂CHCO₂)₄-[OP(OMe)₃]₂ (5) and Cu₂(Cl₃CCO₂)₄[OP(OMe)₃]₂ (6), and as monodentate ligands in Cu(Cl₂CHCO₂)₂(H₂O)₂ (2) and Cu(Cl₃CCO₂)₂(H₂O)₂ (3). The electronic reflectance spectra in the solid state suggest a square pyramidal coordination environment around the copper(II) atom in (1), (4), (5) and (6), and a square-planar coordination environment in (2) and (3). Room temperature X-band e.s.r. spectra of powdered samples studied indicate the presence of electron coupling of copper(II) ions in (1), (4), (5) and (6).     

N,N'-二(3-氨丙基)草酰胺合铜的双核Cu(II)-Zn(II)配合物的合成和结构

合成和表征了三个异核配合物: [Cu(oxpn)Zn(bpy)2](ClO4)2·1/2H2O(1),[Cu(oxpn)Zn-(phen)2](ClO4)2·2H2O(2), [Cu(oxpn)Zn(NO2-phen)2](ClO4)2·2H2O(3)[bpy=2,2'-联吡啶、phen=1,10-菲咯啉、NO2-phen=5-硝基-1,10-菲咯啉、oxpn=N,N'-二(3-氨丙基)草酰胺阴离子], 2的晶体属单斜晶系, P2/n空间群, 晶胞参数: a=1.5061(3), b=1.2924(3), c=2.2802(3)nm, β=108.42(2)°, V=4.1869nm^3,Z=4, Dm=1.409g/cm^3, μ=12.812cm^-^1, F(000)=1812, 最终的偏离因子R=0.093,Rw=0.099。结构分析证实, 配合物具有扩充的草酰胺桥联结构, Cu(II)及Zn(II)的配位环境分别为平面四边形和畸变的八面体构型, 阳离子的对称性近似为C2v。此外, 本文还指派了配合物的电子光谱, 并对EPR、有效磁矩等数据进行了讨论。     

Crystal structures and antibacterial properties of Cu(II) complexes containing an unsymmetrical N2O Schiff base ligand and bidentate N-donor heterocyclic co-ligands

Abstract

Three new Cu(II) Schiff base complexes with bidentate N-donor heterocyclic co-ligands, 2,2'-bipyridine (1), 1,10-phenanthroline (2), and 2,9-dimethyl-1,10-phenanthroline (3), were synthesized and characterized by FT-IR and UV-vis spectroscopy. Molecular structures of [C₂₀H₂₁CuN₄O](ClO₄) (1) and [C₂₄H₂₅CuN₄O](ClO₄) (3) were characterized by single-crystal X-ray crystallography. The Schiff base ligand is an N₂O-type ligand, which is the mono-condensed form of the reaction between 1,3-propanediamine and salicylaldehyde. The antibacterial activities of these complexes were investigated against one gram positive and four gram negative bacteria. Considerable antibacterial activity was obtained against both gram type bacteria. Complexes 2 and 3 with 1,10-phenanthroline and 2,9-dimethyl-1,10-phenanthroline, respectively, showed better antibacterial activity compared to 1 which has the 2,2'-bipyridine co-ligand.     

Synthesis,characterization, DNA interaction and cleavage activity of new mixed ligand copper(II) complexes with heterocyclic bases

Mixed ligand complexes having the formulae Cu(RPO)₂Py₂, Cu(RPO)₂Im₂ and Cu(DBO)₂Py₂ [RPO = resacetophenone oxime, DBO = 2,4-dihydroxybenzophenone oxime, Py = pyridine and Im = imidazole] have been synthesized and characterized by UV–Vis, IR, ESR, cyclic voltammetry and magnetic susceptibility methods. Absorption studies revealed that each of these octahedral complexes is an avid binder of calf thymus DNA. The apparent binding constants for mixed ligand complexes are in order of 10⁴–10⁵ M⁻¹. Based on the data obtained in the DNA binding studies a partial intercalative mode of binding is suggested for these complexes. The nucleolytic cleavage activity of the adducts was carried out on double stranded pBR322 circular plasmid DNA by using a gel electrophoresis experiment in the presence and absence of oxidant (H₂O₂). All the metal complexes cleaved supercoiled DNA by hydrolytic and oxidative paths. The oxidative path dominates the hydrolytic cleavage. The hydrolytic cleavage of DNA is evidenced from the control experiments showing discernable cleavage inhibition in the presence of the hydroxyl radical inhibitor DMSO or the singlet oxygen quencher azide ion.     

Synthesis,structure and biological properties of several binary and ternary complexes of copper(II) with ciprofloxacin and 1,10 phenanthroline

In this study, a new binary complex [Cu(HCip)₂](NO₃)₂ · 6H₂O (1) has been synthesized and then characterized by X-ray structure analyses. In this compound, each ciprofloxacin acts as a bidentate ligand resulting in a crystallographically planar configuration; the nitrate anions are located in apical positions with an axial distance significantly larger than the equatorial distances, which would be consistent with a very weak metal ion interaction due to the Jahn–Teller effect. In addition, both the synthesis and characterization of two new ternary complexes of ciprofloxacin–copper(II)–1,10-phenanthroline, [Cu(phen)(Cip)](NO₃) · 4H₂O (2) and Cu(phen)(HCip)(NO₃)₂ · H₂O (3), have been accomplished. We have also undertaken the single crystal structural determination of 2, in which the ciprofloxacin acts as tridentate bridging ligand; the complex exhibits a five-coordinated motif in a distorted square pyramidal environment around the metal center. The chemical nuclease activity of compounds 2 and 3 has also been studied, revealing that both compounds behave as efficient chemical nucleases in the presence of ascorbate. Mechanistic studies, with various radical oxygen scavengers, indicate that the DNA cleavage reaction is mediated by hydroxyl radicals, singlet oxygen, and the superoxide anion.     

Design of high-dimensional copper(II) malonate complexes with exo-polydentate N-donor ligands

Two polymeric malonato-bridged copper(II) complexes of formulas [(H(2)bpe)[Cu(mal)2]]n.4nH2O (1) and [Cu(4")(mal)(4)(bpe)(3)]n.6nH(2)O (2) [mal = malonate dianion; bpe = 1,2-bis(4-pyridyl)ethylene] have been synthesized and characterized by X-ray diffraction. Complex 1 crystallizes in triclinic space group P(-)1, Z = 1, with unit cell parameters a = 4.8831(10) A, b = 9.585(2) A, c = 11.813(2) A, alpha = 77.29(3) degrees, beta = 82.18(3) degrees, and gamma = 84.92(3) degrees, whereas complex 2 crystallizes in the monoclinic space group P2(1)/n, Z = 4, with unit cell parameters a = 13.462(3) A, b = 10.275(5) A, c = 19.579(4) A, and beta = 105.21(3) degrees. The structure of 1 consists of anionic malonato-bridged uniform copper(II) chains which are connected through hydrogen bonds involving malonate-oxygen atoms, noncoordinated water molecules, and H(2)bpe(2+) cations. The intrachain copper-copper separation through carboxylate-malonate bridge in the anti-syn conformation is 4.8831(10) A. Complex 2 possesses a three-dimensional structure made up of neutral corrugated malonated-bridged copper(II) layers linked through bis-monodentate bpe molecules. The copper(II) atoms within each layer are bridged by a double mu-oxo and four carboxylato-malonate bridges with copper-copper separations of 3.4095(7) A (through oxo) and 4.9488(11)-6.5268(13) A (through carboxylato). The shortest interlayer copper-copper separation across bridging bpe is 13.434(3) A. Variable-temperature magnetic measurements (2-290 K) show an overall ferromagnetic behavior for both compounds. The magnetic pathway of complex 1 is through a single carboxylate-malonate bridge connecting apical and equatorial positions of adjacent copper(II) atoms, and the value of the magnetic coupling (J) for 1 through a numerical expression for a ferromagnetic uniform chain of interacting local doublets is J = +0.049(1) cm(-1). The values for the magnetic couplings through the main intralayer exchange pathways in 2 which correspond to carboxylate-malonate bridges connecting equatorial-equatorial (J(1)) and equatorial-apical (J(2)) coordination sites and to the double mu-oxo bridge linking equatorial-apical (J(5)) positions have been determined through a simplified model. The three magnetic couplings are weak, two of them being ferromagnetic (J(1) = +23(1) cm(-1) and J(2) = +6.5(1) cm(-1)) and the other one antiferromagnetic [zJ' = -1.0(1) cm(-1)]. The values of the magnetic couplings in 1 and 2 compare well with those previously reported for similar malonato-bridged copper(II) complexes of different dimensionalities.     

Thermoanalytical and gas chromatographic properties of the copper(II) complexes of alkyl-substituted Schiff's bases

Summary A study is presented of the thermoanalytical and gas chromatographic (GC) properties of the copper(II) complexes of twenty four tetradenate Schiff's bases. Variations in thermal stability, volatility and GC retention of the complexes are discussed in terms of stereo-electronic effects of the substituents. Although some complexes decomposed extensively during vaporization above 250°C all, apparently, survive chromatography intact at 200°C. Certain complexes were separated as distinct regio-isomers by GC. Fluorinated ligands still appear to be the most suitable derivatizing reagents for Cu(II).     

N-donor ligand complexes of nickel,zinc and copper: Comparisons with tetradentate N-donor ligands derived from Schiff bases

The nickel and zinc complexes of 2-aminomethylaniline (AMA) are reported. Both metals form the octahedral complex [M(AMA)₂(ONO₂)₂] (M = Ni, Zn) where the aromatic ligands lie in the meridial plane with the anilino donors trans to one another. The remaining nitrates coordinate axially. A simple comparison with the nitrogen donor disposition (cis/trans) in nickel complexes of tetradentate N₄ donor ligands derived from symmetric Schiff base ligands is presented. The discussion is extended to interrogate the bonding motifs of the nitrate ligands viz –ONO₂ in the nickel complexes of AMA compared to the two motifs (viz O₂NO and ONO₂) that are isolated for the nickel complexes of the macrocycle hexamethyltetraazacyclotetradecane.     

Synthesis, crystal structures, and magnetic properties of tetranuclear nickel(II) and copper(II) complexes with tridentate Schiff bases

Two cubane-type tetranuclear nickel(II) and copper(II) complexes, [Ni₄(L¹)₄(CH₃OH)₄] (1) and [Cu₄(L²)₄]·H₂O (2), where L¹ and L² are the dianionic forms of the tridentate Schiff bases 4-nitro-2-[(2-hydroxyethylimino)methyl]phenol (H₂L¹) and 5-methoxy-2-[(2-hydroxyethylimino)methyl]phenol (H₂L²), respectively, have been synthesized and characterized by physicochemical methods and single-crystal X-ray diffraction. The magnetic properties of the complexes show the presence of ferromagnetic interactions for complex 1 and antiferromagnetic interactions for complex 2, mediated by hydroxyl bridges.     

Molecular structure and bonding properties of tris(N-methyl-formamide) formamide)(N,N, N', N'-tetramethylethylenediamine)-copper(II) perchlorate

Summary The x-ray crystal structure of tris(N-methylformamide) (N, N, N', N'-tetramethylethylenediamine)copper(II) perchlorate has been determined using three-dimensional x-ray diffraction data. The complex crystallizes in space group P2₁/c with Z=4. The cell dimensions are=8.255(3),b=17.951(6),c=16.541(4) Å, and =91.03(2)°. Least-squares refinement of the structure has yielded a final R value of 4.52% for 2108 independent reflect ions. The square pyramidal structure consists ofN, N, N', N'-tetramethylethylenediamine and twoN-methylformamide ligands forming a basal square plane with Cu–N bond lengths of 2.029(5) and 2.033(5) and Cu–O 1.981(4) and 1.985(4) Å, and a thirdN-methylformamide on the apex with a Cu–O distance of 2.181(4)Å. Each of the molecular plances of the three N-methylformamides lies nearly coplanar with thexy, yz andxz molecular coordination planes. The bonding properties of the title compound and its i.r. and uv-vis spectra are discussed with reference to the structure.