Energy-dependent fragmentation of the p-ethyltoluene molecular ion

The p-ethyltoluene molecular ion fragments by loss of either the methyl group attached to the ring or the β-methyl of the ethyl group. Using specific isotopic labeling and charge exchange techniques the relative importance of the losses of the two methyl groups has been studied as a function of internal energy from metastable ions to ions of 7 eV internal energy. The ratio of loss of the β-methyl to loss of the ring-methyl increases from 3.4 for metastable ions to 6.7 for ions of 7 eV internal energy. This variation is interpreted in terms of an energy-dependent competition between fragmentation and hydrogen migration in a dimethylcy-cloheptatriene intermediate. In variable energy collision-induced dissociation studies the ratio of loss of the β-methyl to loss of the ring-methyl decreases with increasing collision energy. It is speculated that this different behavior is related to the differences in preparation of the molecular ions. Those subjected to collisional activation are prepared initially as ground-state ethyltoluene ions and are vibrationally excited upon collision and may fragment largely from the original structure. By contrast, in the charge exchange and electron impact experiments the molecular ions with sufficient energy to fragment are probably formed initially in electronically excited states and the rearrangement to the cycloheptatriene structure may be more facile in these excited states or during the internal conversion processes leading to vibrationally excited ground-state ions.     

Internal energy and angular momentum effects on collision induced dissociation fragmentation patterns

Data are reported on the effects of internal energy and angular momentum on the collision induced dissociation CID fragmentation pattern. For the ions studied changes in the relative intensities of the fragment ions as internal energy varied were found to be larger than suggested by McLafferty and coworkers. Possible effects of angular momentum on the CID fragmentation pattern are discussed. The charge stripping spectra of the ions studied were found to be strongly dependent on initial energy and/or angular momentum. Hence care must be taken if charge stripping spectra are used to distinguish ion structures.     

Surface-induced dissociation of peptide ions in Fourier-transform mass spectrometry

Peptide molecular ion species up to m/z 3055 introduced into a Fourier-transform mass spectrometer can be made to undergo extensive fragmentation by electrically floating the ion cell. The proportion of ions dissociated increases with increasing voltage, with 48 eV producing the highest absolute abundance of fragment ions above m/z 200. At this energy, spectra closely resemble those from photodissociation at 193 nm, indicating an internal energy deposition of 6–7 eV; change of product abundances with kinetic energy resembles a conventional breakdown curve. The precursor ions apparently are electrostatically attracted to strike screen wires across the ion cell entrance, producing daughter ions of low kinetic energy.

     

Differences between the internal energy depositions induced by collisional activation and by electron transfer of W(CO)6(2+) ions on collision with Ar and K targets

Doubly charged tungsten hexacarbonyl W(CO)(6) (2+) ions were made to collide with Ar and K targets to give singly and doubly charged positive ions by collision-induced dissociation (CID). The resulting ions were analyzed and detected by using a spherical electrostatic analyzer. Whereas the doubly charged fragment ions resulting from collisional activation (CA) were dominant with the Ar target, singly charged fragment ions resulting from electron transfer were dominant with the K target. The internal energy deposition in collisionally activated dissociation (CAD) evaluated with the Ar target was broad and decreased with increasing internal energy. The predominant peaks observed with the K target were associated with singly charged W(CO)(2) (+) and W(CO)(3) (+) ions: these ions were not the result of CA, but arose from dissociation induced by electron transfer (DIET). The internal energy deposition resulting from the electron transfer was very narrow and centered at a particular energy, 7.8 eV below the energy level of the W(CO)(6) (2+) ion. This narrow internal energy distribution was explained in terms of electron transfer by Landau-Zener potential crossing at a separation of 5.9 x 10(-8) cm between a W(CO)(6) (2+) ion and a K atom, and the coulombic repulsion between singly charged ions in the exit channel. A large cross section of 1.1 x 10(-14) cm(2) was estimated for electron capture of the doubly charged W(CO)(6) (2+) ion from the alkali metal target, whose ionization energy is very low. The term "collision-induced dissociation," taken literally, includes all dissociation processes induced by collision, and therefore encompasses both CAD and DIET processes in the present work. Although the terms CID and CAD have been defined similarly, we would like to propose that they should not be used interchangeably, on the basis that there are differences in the observed ions and in their intensities with Ar and K targets.     

Investigation of collisional-activation decomposition process and spectra in the transport region of an electrospray single-quadrupole mass spectrometer.

The use of collisional-activation dissociation (CAD) in the electrospray transport region was evaluated for generating structural information on several pesticides and antibiotics. The collision energy used to generate the CAD spectra could be varied easily by changing the capillary/skimmer potential difference, imparting from 0 eV to above 16 eV internal energy to the near thermal ions generated by electrospray. The internal energy distribution for low-energy collisions (capillary/skimmer potential difference of 20 V) closely matches the curves generated by a triple-quadrupole mass spectrometer. Furthermore, the CAD spectra for selected compounds generated by electrospray in the transport region at a capillary/skimmer potential difference of 30-50 V closely resembled those obtained from the [M + H]+ ion by a triple quadrupole using 30 eV collision energy. The CAD of ions in the transport region resulted in 70% to 80% daughter-ion yields and minimal loss in overall ion current compared to the ion current for protonated or cationized parent molecules. The major daughter ions for 10 pg of Aldicarb and penicillin G could be detected (signal-to-noise ratio greater than 5) under full-scan CAD conditions.     

Dissociative scattering of hyperthermal energy CF3+ ions from modified surfaces

Dissociative scattering of CF3+ ions in collision with a self-assembled monolayer surface of fluorinated alkyl thiol on a gold 111 crystal has been studied at low ion kinetic energies (from 29 to 159 eV) using a custom built tandem mass spectrometer with a rotatable second stage energy analyzer and mass spectrometer detectors. Energy and intensity distributions of the scattered fragment ions were measured as a function of the fragment ion mass and scattering angle. Inelastically scattered CF3+ ions were not observed even at the lowest energy studied here. All fragment ions, CF2+, CF+, F+, and C+, were observed at all energies studied with the relative intensity of the highest energy pathway, C+, increasing and that of the lowest energy pathway, CF2+, decreasing with collision energy. Also, the dissociation efficiency of CF3+ decreased significantly as the collision energy was increased to 159 eV. Energy distributions of all fragment ions from the alkyl thiol surface showed two distinct components, one corresponding to the loss of nearly all of the kinetic energy and scattered over a broad angular range while the other corresponding to smaller kinetic energy losses and scattered closer to the surface parallel. The latter process is due to delayed dissociation of collisionally excited ions after they have passed the collision region as excited parent ions. A similar study performed at 74 eV using a LiF coated surface on a titanium substrate resulted only in one process for all fragment ions; corresponding to the delayed dissociation process. The intensity maxima for these fragmentation processes were shifted farther away from the surface parallel compared to the thiol surface. A new mechanism is proposed for the delayed dissociation process as proceeding via projectile ions' neutralization to long-lived highly excited Rydberg state(s), reionization by the potential field between the collision region and entrance to the energy analyzer, and subsequent dissociation several microseconds after collisional excitation. A kinematic analysis of experimental data plotted as velocity Newton diagrams demonstrates that the delayed dissociation process results from the collisions of the ion with the bulk surface; i.e., the self-assembled monolayer surface acts as a bulk surface. A similar analysis for the highly inelastic collision processes shows that these are due to stronger collisions with a fraction of the thiol molecular chain, varying in length (mass) with the ion energy.     

A comparison of three experimental techniques for ion structure studies via collision-induced reactions: The [C5H8]+˙ example

Structure differentiation between [C₅H₈]⁺˙ ions, formed by electron ionization of various precursors, has been used as a test case for comparison of three experimental techniques involving collision-induced dissociation (CID). Low-energy CID in an rf-only quadrupole collision cell has been studied in the range 1–150 eV laboratory collision energy. These data have been compared with those obtained using mass-analyzed ion kinetic energy spectroscopy at 8 keV energy, and with results from dissociative charge-stripping (DCS) coupled with a second electron capture collision (EC) in order to remove intense interferences (DCS/EC). The greatest degree of structure differentiation was possible using the DCS/EC technique. The other two methods were comparable in this regard, although effects of pre-collision internal energy was apparent for collision energies much below 30 eV. Day-to-day reproducibility of spectra was most difficult to obtain for the low-energy CID technique. Of the [C₅H₈]⁺˙ ions thus tested, the isoprene molecular ion was clearly the best match to the fragment ion formed from limonene.     

Surface induced dissociation of chromium hexacarbonyl on fluorinated alkanethiolate surface in ion cyclotron resonance mass spectrometer: studies of energetics of the process using recursive internal energy distribution search method

Energy transfer in ion-surface collisional activation is characterized for 0–30 eV collisions of chromium hexacarbonyl molecular cations with a monolayer of fluorinated alkanethiolate self-assembled onto a solid gold surface. This surface was mounted on the back trapping plate of the Infinity® cell of a Bruker BioApex 7T ion cyclotron resonance mass spectrometer on the B-field axis orthogonal to the ion beam direction. Internal energy deposition was deduced from fragmentation spectra using a recursive internal energy distribution search method. The efficiency of energy transfer into the ion slowly increases with incident ion energy to a maximum value of 20% at about 23 eV collision energy. Approximate kinetic energy distributions of the fragments were measured by deducing the dependence of ion abundance on trapping potential. From the kinetic energy dependence on mass we infer that rapid decomposition of the molecular cation occurs after it recoils from the surface. Knowledge of both internal and kinetic energy distributions of collisionally activated ions enabled us to deduce the energy deposited into the self-assembled monolayer as a function of collision energy.     

Energy deposition in [Fe(CO)5]+˙ upon collision with a metal surface

Collision of the title ion upon a stainless steel surface at near-normal incidence leads to deposition of internal energy in a well-defined narrow distribution. The energy deposited increases with laboratory collision energy and exceeds 7 eV (average) for 100 eV collisions. The translational-to-vibrational energy transfer efficiency is 15% (assuming an infinitely massive target) at 25 eV collision energy. Comparison is made with the internal energy distributions associated with gas-phase collisional activation using both low and high ion kinetic energies. The narrowness of the distribution of internal energies, the easy access to ions excited to different extents, and the high internal energies accessible, make the ion/surface collision process superior to gas-phase collisional activation for this system.     

Translational to vibrational energy conversion during surface-induced dissociation of n-butylbenzene molecular ions colliding at self-assembled monolayer surfaces

Translational to vibrational (T-->V) energy conversion in the course of inelastic collisions of n-butylbenzene molecular ions with thiolate self-assembled monolayer (SAM) gold surfaces is studied to better understand internal energy uptake by the hyperthermal projectile ions. The projectile ion is selected by a mass spectrometer of BE configuration and product ions are analyzed using a quadrupole mass analyzer after kinetic energy selection with an electric sector. The branching ratio for formation of the fragment ions m/z 91 and m/z 92, measured over a range of collision energies, is used to estimate the average internal energy with the aid of calculations based on unimolecular dissociation kinetics [Rice-Ramsperger-Kassel-Marcus (RRKM) theory]. The measured T-->V conversion efficiencies (the fraction of the laboratory kinetic energy converted into internal energy) are 11 approximately 12% for dodecanethiolate SAM (H-SAM) and 19 approximately 20% for 2-perfluorooctylethanethiolate SAM (F-SAM), respectively, over ranges of a few 10s of eV. The values are similar to those reported earlier for other thermometer molecules undergoing surface collisions. Chemical sputtering leading to ionization of the surface is a prominent feature of the surface-induced dissociation (SID) spectra of n-butylbenzene acquired using the H-SAM surface but not the F-SAM surface because of the lower ionization energy of the former.     

Structure and fragmentation of dimethyl methylphosphonate and trimethyl phosphite

The structures and fragmentation pathways of two isomeric organophosphorus esters, dimethyl methylphosphonate (DMMP) and trimethyl phosphite (TMP) have been determined. The long-lived, low-energy molecular ions of DMMP were found to undergo a keto-to-enol isomerization prior to collision-induced dissociation. This isomerization was established through the comparison of the collision spectra from DMMP, TMP, isotopically labeled DMMP and a model precursor ion. Electron ionization and charge exchange reactions were used to study the isomerization as a function of the internal energy of the molecular ion. The structure of the TMP molecular ion retained the structure of the neutral molecule. The daughter ion spectra of the isomeric fragment ions from DMMP and TMP were used to infer the fragment ion structures. Negative ions of DMMP and TMP were also studied, and their collision spectra were found to be indistinguishable.     

Surface-induced dissociation and chemical reactions of C2D 4 + on stainless steel, carbon (HOPG), and two different diamond surfaces

Surface-induced interactions of the projectile ion C₂D₄⁺ with room-temperature (hydrocarbon covered) stainless steel, carbon highly oriented pyrolytic graphite (HOPG), and two different types of diamond surfaces (O-terminated and H-terminated) were investigated over the range of incident energies from a few eV up to 50 eV. The relative abundance of the product ions in dependence on the incident energy of the projectile ion [collision-energy resolved mass spectra, (CERMS) curves] was determined. The product ion mass spectra contained ions resulting from direct dissociation of the projectile ions, from chemical reactions with the hydrocarbons on the surface, and (to a small extent) from sputtering of the surface material. Sputtering of the surface layer by low-energy Ar⁺ ions (5–400 eV) indicated the presence of hydrocarbons on all studied surfaces. The CERMS curves of the product ions were analyzed to obtain both CERMS curves for the products of direct surface-induced dissociation of the projectile ion and CERMS curves of products of surface reactions. From the former, the fraction of energy converted in the surface collision into the internal excitation of the projectile ion was estimated as 10% of the incident energy. The internal energy of the surface-excited projectile ions was very similar for all studied surfaces. The H-terminated room-temperature diamond surface differed from the other surfaces only in the fraction of product ions formed in H-atom transfer surface reactions (45% of all product ions formed versus 70% on the other surfaces).     

Internal energy distributions deposited in doubly and singly charged tungsten hexacarbonyl ions generated by charge stripping,electron impact,and charge exchange

The distribution Pε of internal energies deposited in W(CO)₆ ^+?. ions upon charge stripping (that is, electron detachment to yield the doubly charged ion in the course of a single kiloelec-tronvolt energy collision) was estimated by a thermochemical method from the measured relative abundances of the doubly charged fragment ions produced. The thermochemical information needed to estimate P/ge was obtained by measuring the threshold translational energy losses associated with charge stripping of the singly charged fragment ions, W(CO) _n ⁺ (n = 0-5). The P(/ge) curve falls exponentially with increasing internal energy. The average energy transferred to W(CO)₆ ^+? upon a 7.8-keV collision with O₂ is 19 eV, yielding W(CO)₆ ^2? ions with an average of 4 eV of internal energy. In its general appearance, the P(ε) distribution associated with charge stripping is similar to the curves obtained from simple collisional activation of either W(CO) ₆ ^+?. or W(CO)₆ ^2+? in kiloelectronvolt energy gaseous collisions. Given that charge stripping occurs by way of an electronic excitation process, this similarity in the energy deposition function is taken to indicate that electronic excitation is also the major mechanism for simple collisional activation in this system at zero scattering angle in the kiloelectronvolt energy regime. The internal energy distribution associated with a related charge-stripping process, charge inversion from the metal carbonyl anions to yield the corresponding cations, was also recorded. This reaction shows a large (～7 eV) average internal energy deposition with a distribution that indicates near-zero probability of formation of unexcited ions. These data are tentatively interpreted in terms of vibrationalelectron detachment. The internal energy distribution associated with an exothermic process, charge exchange [W(CO)₆ ^2+? + O₂ → W(CO) ₊ ^6?+O₂ ^+?], was also characterized. Unexpectedly strong coupling of translational to internal energy is observed, and there is a large probability of depositing internal energies in excess of 10 eV, even though the exothermicity is only 3 eV. Finally, the internal energy distributions associated with the formation of doubly charged W(CO)₆ ^2+? ions by electron ionization have been measured. Unlike the distribution for charge stripping, but like that for singly charged ions generated by electron impact, this distribution shows considerable structure, presumably due to Franck-Condon factors.     

Doubly charged ion mass spectra 8—alkenes

Doubly charged ion mass spectra of 23 alkenes have been measured using a double focusing Hitachi RMU-7L mass spectrometer. Ion mass spectra were obtained using 100 eV electron energy and 3.2 kV ion accelerating voltage. Each 2E spectrum was determined using the olefinic compound under investigation as the target gas. In general, spectra are dominated by fragment ions which result from extensive hydrogen loss from the doubly charged molecular ion. Appearnce energies have been measured for intense fragment ions in each spectrum.     

Measuring internal energy deposition in collisional activation using hydrated ion nanocalorimetry to obtain peptide dissociation energies and entropies

The internal energy deposited in both on- and off-resonance collisional activation in Fourier transform ion cyclotron resonance mass spectrometry is measured with ion nanocalorimetry and is used to obtain information about the dissociation energy and entropy of a protonated peptide. Activation of Na⁺(H₂O)₃₀ results in sequential loss of water molecules, and the internal energy of the activated ion can be obtained from the abundances of the product ions. Information about internal energy deposition in on-resonance collisional activation of protonated peptides is inferred from dissociation data obtained under identical conditions for hydrated ions that have similar m/z and degrees-of-freedom. From experimental internal energy deposition curves and Rice-Ramsperger-Kassel-Marcus (RRKM) theory, dissociation data as a function of collision energy for protonated leucine enkephalin, which has a comparable m/z and degrees-of-freedom as Na⁺(H₂O)₃₀, are modeled. The threshold dissociation energies and entropies are correlated for data acquired at a single time point, resulting in a relatively wide range of threshold dissociation energies (1.1 to 1.7 eV) that can fit these data. However, this range of values could be significantly reduced by fitting data acquired at different dissociation times. By measuring the internal energy of an activated ion, the number of fitting parameters necessary to obtain information about the dissociation parameters by modeling these data is reduced and could result in improved accuracy for such methods.     

High-energy collision-induced dissociation of small polycyclic aromatic hydrocarbons

High-energy collision-induced dissociation (CID) experiments on polycyclic aromatic hydrocarbons (PAHs) having 2-6 rings, naphthalene, anthracene, phenanthrene, fluoranthene, pyrene and coronene, were performed, and the relative abundances of their fragment ions were investigated as a function of collision energy. The results revealed that the PAHs except naphthalene showed a bimodal-type distribution of positive fragmentation ions, which is closely similar to the fragment-ion distribution reported for the CID of three-dimensional fullerene, C(60)(+) and C(70)(+). The three-ring isomers of anthracene and phenanthrene and the four-ring isomers of fluoranthene and pyrene can be distinguishable in their spectra under an electron ionization energy of 70 eV, but the high-energy CID spectra of the three- and four-ring isomers were almost identical. The fragmentation corresponding to fragment ions in the low-mass region of the bimodal CID spectra could be interpreted by the simple statistical model that fragment ions are formed by random evaporation from the molecular ions after a considerable structural rearrangement, 'phase transition', occurring at some high-energy state.     

Effect of different target gases on low-energy collision-activated dissociation of peptides

Experimental variables affecting the daughter-ion spectra of a series of protonated peptides [MH]+, produced by fast-atom bombardment ionization, using a low energy (0-450 eV) quadrupole collision cell are investigated. The parameters studied include target gas pressure, collision energy, cross-sectional area and acidity of the target gas. The results show that low-mass immonium ions are preferentially formed both at high collision energies (greater than 200 eV) and at target gas pressures greater than 10(-6) mBar (where multiple collisions occur in the gas cell). Positive fragment ion abundance is maximized when acidic gases are used as the target gases, and this is rationalized on the basis of a proton-transfer reaction from the target gas to the amide nitrogen of the peptide bond promoting fragmentation.     

Applications of collision dynamics in quadrupole mass spectrometry

Some applications of collision dynamics in the field of quadrupole mass spectrometry are presented. Previous data on the collision induced dissociation of ions in triple quadrupole mass spectrometers is reviewed. A new method to calculate the internal energy distribution of activated ions directly from the increase in the cross section for dissociation with center of mass energy is presented. This method, although approximate, demonstrates explicitly the high efficiency of transfer of translational to internal energy of organic ions. It is argued that at eV center of mass energies, collisions between protein ions and neutrals such as Ar are expected to be highly inelastic. The discovery and application of collisional cooling in radio frequency quadrupoles is reviewed. Some previously unpresented data on fragment ion energies in triple quadrupole tandem mass spectrometry are shown that demonstrate directly the loss of kinetic energy of fragment ions in the cooling process. The development of the energy loss method to measure collision cross sections of protein ions in triple quadrupole instruments is reviewed along with a new discussion of the effects of inelastic collisions in these experiments and related ion mobility experiments.     

The metastable formation of di-ethylchloronium ions from ethylchloride dimer ions in a seeded molecular beam

Cluster ions of ethylchloride and their dissociation products have been produced in a supersonic expansion of ethylchloride seeded in Ar and energy selected by the threshold photoelectron photoion coincidence (TPEPICO) method. The peak widths of the ion time of flight distribution indicate that all of the clusters are produced by dissociative photoionization of higher order clusters. Thus, trimer ions dissociate to form dimer ions and an ethylchloride monomer. This dimer ion was found to be metastable with respect to the formation of the di-ethylchloronium ion and a chlorine atom. The measured dissociation rate as a function of the dimer ion internal energy was compared to the calculated rates based on the statistical RRKM/QET theory. Good agreement was found when the dimer adiabatic IP was assumed to be 10.2 eV. The Cl loss from the ethylchloride dimer ion is associated with a reverse activation energy of about 0.32 eV.     

Calibration Point for Electron Ionization MS / MS spectra measured with multiquadrupole mass spectrometers

A protocol for establishing standard instrument conditions for measurement of product ion MS/MS spectra from parent ions produced by electron ionization is presented. Within this protocol, the ion at m/z 231 (C₅F₉ ⁺) from perfluorokerosene or perfluorotributylamine is selected as the parent ion and subjected to collision-induced dissociation. The relative intensities of product ions at m/z 69, 131, and 181 are monitored as a function of collision energy while keeping the target gas pressure constant within the range of 10^?4–10^?6 torr (measured), or a beam attenuation of approximately 30-70%. The collision energy at which the ion intensities for product ions at m/z 69 and 181 are equal is defined as the calibration point at that collision gas pressure; the intensity of the ion at m/z 131 is very close to this value as well. Electron ionization MS/MS spectra taken at the calibration point using two different multiquadrupole instruments show good reproducibility for several test compounds. The high degree of similarity may aid in the establishment of a MS/MS spectral library.