The development of nuclear microprobe techniques for the spatial determination of13C and13C/12C ratios

Sensitive and selective nuclear reaction methods have been sought for the nuclear microprobe measurement of the spatial distributions of¹³C and¹³C/¹²C ratios. The¹³C(α, n)¹⁶O reaction, with neutron detection, is the most selective for¹³C, and has a sensitivity of ca. 100 ppm. The reactions¹³C(d, p)¹⁴C and¹²C(d, p)¹³C, with proton detection, are the most sensitive for the simultaneous measurement of¹³C and¹²C, with detection limits of 30 and 2 ppm respectively. Less sensitive alternative reaction pairs are;¹³C(³He, p)¹⁵N and¹²C(³He, p)¹⁴N;¹³C(d, nγ)¹⁴N and¹²C(d, pγ)¹³C;¹³C(³He, pγ)¹⁵N and¹²C(³He, pγ)¹⁴N. The conditions governing their use, particularly light element interferences, are detailed.     

Substituent effects on 13C?13C coupling constants and chemical shifts in 13C labelled polycyclic aromatic hydroxy compounds

The effects of an hydroxy substituent on ¹³C? ¹³C coupling constants and ¹³C chemical shifts have been measured in 1-hydroxynaphthalene-2-¹³C and 1-hydroxypyrene-1-¹³C. The changes observed in the ¹³C? ¹³C couplings show the effect of a substituent attached directly to the labelled carbon or to a carbon ortho to this. In both situations the effect is a decrease in the numerical magnitude of most of the long range ¹³C? ¹³C coupling constants.     

13C?13C spin coupling constants in tetrahydronaphthylene,hexahydrobenzanthracene and benzo[a]pyrene derivatives

The ¹³C? ¹³C spin coupling constants have been determined in substituted [1-¹³C]tetrahydronaphthylenes, [5-¹³C]hexahydrobenzanthracenes and [5-¹³C]benzanthracene. In addition, the ¹³C? ¹³C spin coupling constants for 7-hydroxy[7-¹³C]benzopyrene, trans-7,8-dihydro[7-¹³C]benzopyrene-7,8-diol and trans-7,8-dihydro[10-¹³C]benzopyrene-7,8-diol are reported, together with the one-bond carbon-carbon coupling constants between C-4 and C-5 in selected 4,5-disubstituted benzopyrenes. Values for the directly bonded coupling constants and long-range coupling constants are similar to those reported previously for other aromatic and aliphatic systems. Substituent effects on carbon-carbon coupling are compared for similarly substituted cyclic and acyclic systems.     

Unterscheidung symmetrisch substituierter Kohlenstoffringe durch 13C,13C-Spin-Spin-Kopplung. Vergleich von herkömmlicher und INADEQUATE-13C-NMR-Spektroskopie

Distinction of Symmetrically Substituted Carbocyclic Compounds by ¹³C, ¹³C Spin-Spin Coupling. Comparison of Conventional and INADEQUATE¹³C-NMR Spectroscopy ¹³C,¹³C spin-spin couplings allow an easy distinction of symmetrically substituted carbocyclic compounds. On the basis of the number and ratio of ¹³C,¹³C satellite pairs, for instance head to head and head to tail products of photodimerisations can be distinguished. The informations derived from a conventional and an INADEQUATE ¹³C-NMR spectrum are compared.     

1H and 13C chemical shifts and coupling constants of lupane. Application of two-dimensional NMR techniques

2D NMR techniques (J-resolved ¹³C, ¹³C? ¹³C correlated, ¹H? ¹³C correlated) were used to gather more chemical shift and coupling information on the pentacyclic triterpene, lupane. They confirm and complete ¹³C assignments made earlier, and corroborate the constitution and major configurational details of lupane. Lupane is a parent compound and spectral reference in the study of sedimental demethylated triterpenes.     

Biosynthese de la botryodiplodine,mycotoxine de penicillium roqueforti: Incorporations d'acetate[1-13C], [2-13C], [1-2 13C]et d'acide orsellinique 2-13C-carboxyle 13C], [3-4 13C]

Incorporations of [1-¹³C], [2-¹³C], [1-2¹³C]acetate and [2-¹³C, carboxyl-¹³C], [3-4¹³C]orsellinic acid into botryodiplodin indicate that this mycotoxin is biosynthesized by the polyketide pathway. Orsellinic acid is a precursor of botryodiplodin. A biosynthetic pathway, using orsellinic acid as precursor, is proposed.     

Synthesis and multinuclear NMR data of the ferrocenes (Me3Ecp)2Fe (E = C,Si, Ge,Sn, Pb)

The substituted cyclopentadienyl anions Me₃Ecp⁻ with E = C, Si, Ge, Sn, Pb have been prepared from either the mono- or disubstituted cyclopentadienes, including the hitherto unknown (Me₃Pb)₂C₅H₄. Representative examples have been characterized by ¹³C NMR spectroscopy. Treatment with iron(II) chloride yielded the ferrocenes (Me₃Ecp)₂Fe, which have been investigated by ¹H, ¹³C, ²⁹Si, ¹¹⁹Sn, and ²⁰⁷Pb NMR spectroscopy. ¹³C¹³C coupling and selective proton decoupling were used for the assignment of the ¹³C and ¹H signals. The shifts δ(¹³C) reflect the electron-releasing or -withdrawing power of the substituents Me₃E, but the isotope shifts ¹Δ¹³C(i)(¹³C(j)) do not show a similar trend. There is evidence that δ(¹¹⁹Sn) and δ(²⁰⁷Pb) are influenced by the coordination. The analysis of the coupling constants reveals that ¹J(¹³C(1)¹³C(2/5)) varies with the electronegativity of E. Because of the small range (4.5–5.0 Hz) of ¹J(⁵⁷Fe¹³C) the effect of E is apparent only when E = C is replaced by E = Si. As for the coupling between E and ¹³C or ¹H, the square root of the reduced coupling constant K is related linearly to the atomic number of E; exceptions are ¹K(²⁰⁷Pb¹³C).     

Structural Revision and Elucidation of the Biosynthesis of Hypodoratoxide by 13C,13C COSY NMR Spectroscopy

Feeding of (2,3,4,5,6‐¹³C₅)mevalonolactone to the fungus Hypomyces odoratus resulted in a completely labeled sesquiterpene ether. The connectivity of the carbon atoms was easily deduced from a ¹³C,¹³C COSY spectrum, revealing a structure that was different from the previously reported structure of hypodoratoxide, even though the reported ¹³C NMR data matched. A structural revision of hypodoratoxide is thus presented. Its absolute configuration was tentatively assigned from its co‐metabolite cis‐dihydroagarofuran. Its biosynthesis was investigated by feeding of (3‐¹³C)‐ and (4,6‐¹³C₂)mevalonolactone, which gave insights into the complex rearrangement of the carbon skeleton during terpene cyclization by analysis of the ¹³C,¹³C couplings.     

An asymmetric synthesis of l-[3-C]phenylalanine and l-[3-C]tyrosine from [C]carbon monoxide

-[3-¹³C]Phenylalanine and -[3-¹³C]tyrosine were synthesized. [α-¹³C]Benzyl bromides were prepared from [¹³C]carbon monoxide via the palladium-catalyzed carboalkoxylation of aryl halides. The asymmetric carbon corresponding to the 2-position in phenylalanine was introduced by the diastereoselective alkylation of Dellaria's oxazinone with [α-¹³C]benzyl bromides. Finally, ethanolysis, deprotection, hydrogenolysis and acid hydrolysis of the resulting alkylated oxazinones gave -[3-¹³C]phenylalanine and -[3-¹³C]tyrosine in high optical purity.     

Synthesis of [18,19,21,22‐13C4]‐Labeled Tautomycin as an NMR Probe of Protein Phosphatase Inhibitor

We have accomplished the synthesis of ¹³C‐labeled tautomycin at the C18, C19, C21, and C22 positions starting from 100 % [¹³C]triethylphosphonoacetate for the purpose of elucidating the dynamics and conformation of the C17–C26 moiety. NMR spectroscopy of ¹³C‐labeled tautomycin revealed strong binding with protein phosphatase type 1 and new features in the ¹³C NMR spectrum, such as the very small three‐bond coupling constants (²J).     

Quantitative evaluation of the biosynthetic pathways leading to δ-aminolevulinic acid from the Shemin precursor glycine via the C5 pathway in Arthrobacter hyalinus by analysis of 13C-labeled coproporphyrinogen III biosynthesized from [2-13C]glycine, [1-13C]acetate, and [2-13C]acetate using 13C NMR spectroscopy

The biosynthetic pathways leading to δ-aminolevulinic acid (ALA) from the Shemin precursor glycine via the C5 pathway in Arthrobacter hyalinus were quantitatively evaluated by means of feeding experiments with [2-¹³C]glycine, sodium [1-¹³C]acetate, and sodium [2-¹³C]acetate, followed by analysis of the labeling patterns of coproporphyrinogen III (Copro’gen III) (biosynthesized from ALA) using ¹³C NMR spectroscopy. Two biosynthetic pathways leading to ALA from glycine via the C5 pathway were identified: i.e., transformation of glycine to l-serine catalyzed by glycine hydroxymethyltransferase, and glycine synthase-catalyzed catabolism of glycine to N ⁵,N ¹⁰-methylene-tetrahydrofolic acid (THF), which reacts with another molecule of glycine to afford l-serine. l-Serine is transformed to acetyl-CoA via pyruvic acid. Acetyl-CoA enters the tricarboxylic acid cycle, affording 2-oxoglutaric acid, which in turn is transformed to l-glutamic acid. The l-glutamic acid enters the C5 pathway, affording ALA in A. hyalinus. A ¹³C NMR spectroscopic comparison of the labeling patterns of Copro’gen III obtained after feeding of [2-¹³C]glycine, sodium [1-¹³C]acetate, and sodium [2-¹³C]acetate showed that [2-¹³C]glycine transformation and [2-¹³C]glycine catabolism in A. hyalinus proceed in the ratio of 52 and 48 %. The reaction of [2-¹³C]glycine and N ⁵,N ¹⁰-methylene-THF, that of glycine and N ⁵,N ¹⁰-[methylene-¹³C]methylene-THF generated from the [2-¹³C]glycine catabolism, and that of [2-¹³C]glycine and N ⁵,N ¹⁰-[methylene-¹³C]methylene-THF transformed the fed [2-¹³C]glycine to [1-¹³C]acetyl-CoA, [2-¹³C]acetyl-CoA, and [1,2-¹³C₂]acetyl-CoA in the ratios of 42, 37, and 21 %, respectively. These labeled acetyl-CoAs were then incorporated into ALA. Our results provide a quantitative picture of the pathways of biosynthetic transformation to ALA from glycine in A. hyalinus.     

Carbon-13 kinetic isotope effects in the decarbonylations of lactic acid containing13C at the natural abundance level

The¹³C kinetic isotope fractionation in the decarbonylation of lactic acid of natural isotopic composition by sulfuric acid has been studied in the temperature range of 20–80°C. The¹³C₍₁₎ isotope separation in the decarbonylation of lactic acid by concentrated sulfuric acid depends strongly on the temperature above 40°C. Below this temperature the¹³C isotope effect in the decarbonylation of lactic acid by concentrated sulfuric acid is normal similarly as has been found inthe decarbonylation of lactic [1-¹⁴C] acid. The experimental values of k(¹²C)/k(¹³C) ratios of isotopic rate constants for¹²C and¹³C are close to, but slightly higher than theoretical¹³C-kinetic isotope effects calculated (neglecting tunneling) under the asumption that the C₍₁₎-OH bond is broken in the rate-controlling step of the dehydration reaction. Dilution of concentrated sulfuric acid with water up to 1.4 molar (H₂O)/(H₂SO₄) ratio caused the increase of the¹³C isotope fractionation from 1.0273 found in concentrated sulfuric acid at 80.5°C to 1.0536±0.0008 (at 80.6°C). A discussion of the abnormally high temperature dependence of¹⁴C and¹³C isotope fractionation in this reaction and the discussion of the problem of relative¹⁴C/¹³C kinetic isotope effects is given.     

Synthesis of 13C and 15N labelled (S)-Tryptophan

(R,S)-serine-1-¹³C was incubated in a culture of $\text{Escherichia}$$\text{coli}$ cells to produce (S)-trytophan-1-¹³C. Bromoacetyl bromide-2-¹³C was converted to bromoacetanilide and cyclization of the anilide, followed by reduction and dehydrogenation furnished indole-3-¹³C. Indole-¹⁵N was synthesized by known sequences. These ¹³C and ¹⁵N isotomers of indole were converted by commercially available, lyophilized $\text{E}$. $\text{coli}$ to furnish (S)-tryptophan-γ-¹³C and (S)-tryptophan-indole-¹⁵N, respectively.     

Gas-phase 13C chemical shifts in the zero-pressure limit: refinements to the absolute shielding scale for 13C

¹³C chemical shifts have been measured relative to ¹³CO in the zero-pressure limit for over twenty molecules for which theoretical calculations of ¹³C nuclear shielding have recently been reported. Rovibrational averaging effects on the spin-rotation constant in ¹³C¹⁶O have been used to find σ_e(¹³C in ¹³C¹⁶O) = 3.0 ± 1.2 ppm and σ₀(¹³C in ¹³C¹⁶O) = 1.0 ± 1.2 ppm. With the latter, the σ₀ values for the ¹³C nuclei in this work have been determined absolutely and compared with calculated values. Agreement is generally good in most cases except where low-lying n → π transitions contribute significantly to the paramagnetic shielding.     

13C-NMR studies of polyfluorinated hydrocarbons,carboxylic acid derivatives,alcohols and ethers

δ¹³C values and coupling constants (¹J(¹³C¹H), ¹J(¹³C¹³C), ⁿJ(¹⁹F¹³C) are reported for 19 polyfluorinated organic compounds. It is shown that the shielding of carbon depends upon the number of fluorine atoms in α -position. If the R_F-group is linked to a π -system hyperconjugative $\text{and}$ η-π interaction accounts for the δ¹³C data. The values ¹J(¹³C¹H) and ¹J(¹³C¹³C) are in qualitative agreement with changes of the s-character of the respective bonds.     

The additivity of NMR carbon–carbon spin–spin coupling constants

Fluorene-9-¹³C, fluorenone-9-¹³C, acenaphthenone-11-¹³C, acenaphthenone-12-¹³C, 1-methylcyclopentanol-1-¹³C and 1-methylcyclopentene-1-¹³C were synthesized to obtain J(CC) values between the natural carbons and the labeled carbons. Each of these compounds possessed at least one asymmetric dual-path coupling, i.e., coupling between the labeled carbon and another carbon via simultaneous two- and three-bonded coupling paths. Model ¹³C-labeled compounds were synthesized where necessary to give expected values of the constituent mono-path couplings. Values of these dual-path couplings (²⁺³)J suggested that the observed value is the (at least approximate) algebraic sum of the two constituent J values.     

Chemoenzymatic synthesis of [3,9-C]-labeled NeuAc and KDN

The chemoenzymatic synthesis of ¹³C-labeled sialic acid (NeuAc) and 3-deoxy-d-glycero-d-galacto-2-nonulosonic acid (KDN) as useful molecular probes for studying the conformation of sialyl or KDN oligosaccharides attached to proteins was performed by using [6-¹³C]-ManNAc, [6-¹³C]-Man and [3-¹³C]-pyruvic acid sodium salt. In the synthesis of the compounds, 5,6-anhydro intermediates were found to easily provide not only 6-¹³C-labeled but also 5-, and 6-modified NeuAc and KDN analogs. Furthermore, it was demonstrated that identical results are obtained by NMR for both [3,9-¹³C]-NeuAc and 1:1 mixtures of [3-¹³C]- and [9-¹³C]-NeuAc.     

13C?13C spin–spin coupling constants and 13C isotope effects on 13C chemical shifts in some 4-membered rings

The ¹³C? ¹³C spin–spin coupling constants in natural abundance oxetane, thietane, cyclobutanone, bromo-and chlorocyclobutane have been measured. Furthermore, the ¹³C isotope-induced changes in the chemical shifts of the different ¹³C nuclei in the molecules mentioned above are reported. These shifts are normally to higher magnetic field; in cyclobutanone, however, the resonance of the carbonyl carbon has shifted to lower field because of the substitution of ¹³C?3 for ¹²C?3.     

Nuclear magnetic resonance studies of boron compounds : XVI. Carbon-13 studies of organoboranes: Phenylboranes and boron-substituted aromatic heterocycles

¹³C and ¹¹B NMR data of 29 phenylboranes and 9 boron-substituted aromatic heterocycles (thiophene, N-methylpyrrole and furan) are discussed. The observed ¹³C chemical shifts of the para-carbon atoms in phenylboranes and the corresponding carbon atoms in the aromatic heterocycles are consistent with mesomeric interactions of the boryl group with the aromatic system. The trend of δ(¹³C(para)) in phenylboranes corresponds to that observed for isoelectronic phenylcarbocations. Low temperature ¹³C NMR and/or ¹³C {¹¹B, ¹H} heterocuclear triple resonance experiments were employed to obtain the ¹³C chemical shifts of the boron-bonded carbon atoms.