质粒DNA在灌注色谱基质上的吸附行为

Anion exchange chromatography is the most popular chromatographic method for plasmid separation.POROS R1 50 is a perfusio n chro mato graphic suppo rt w hich is a reversed phase matrix and is an alternative to co nventio nal o nes due to its mass transfer pro perties.The adso rptio n and elutio n o f the pIDKE2 plasmid o nto reversed phase POROS R1 50 w as studied.Langmuir iso therm mo del w as adjusted in o rder to get the max imum adso rptio n capacity and the disso ciatio n co nstant fo r POROS R1 50-plasmid DNA(pDNA) system.Breakthro ugh curves w ere o btained fo r vo lumetric flo w s betw een 0.69-3.33 mL/min,given dynamic capacity up to 2.3 times higher than tho se repo rted fo r io nic ex change matrix used during the purificatio n pro cess o f plasmids w ith similar size to that o f pIDKE2.The efficiency w as less than 45% fo r the flo w co nditio ns and initial co ncentratio n studied,w hich means that the suppo rt w ill no t be o perated under saturatio n circumstances.     

Chromatography of plasmid DNA

Liquid chromatography plays a central role in process-scale manufacturing of therapeutic plasmid DNA (pDNA) for gene therapy and DNA vaccination. Apart from its use as a preparative purification step, it is also very useful as an analytical tool to monitor and control pDNA quality during processing and in final formulations. This paper gives an overview of the use of pDNA chromatography. The specificity of pDNA purification and the consequent limitations to the performance of chromatography are described. Strategies currently used to overcome those limitations, as well as other possible solutions are presented. Applications of the different types of chromatography to the purification of therapeutic pDNA are reviewed, and the main advantages and disadvantages behind each technique highlighted.     

Adsorption and desorption behavior of plasmid DNA on ion-exchange membranes. Effect of salt valence and compaction agents

In this study, we report the effect of salt type and compaction agents on adsorption and desorption behavior of plasmid DNA on strong anion-exchange membranes. Both divalent cations and compaction agents are known to reduce the effective charge density of plasmid DNA in solution, and compaction agents decrease the radius of gyration of plasmids. Differences in the batch uptake adsorption of a 6.1 kilo base pair plasmid in solution with sodium and magnesium salts were observed at low ionic strengths. Recoveries at high salt conditions, however, were independent of the cation, and measured only 63-76%. Similarly, no improvement in recoveries were observed when using sulfate rather than chloride anions as displacers. The compaction agents, spermine and spermidine, showed no strong effect on the uptake adsorption, capacity, or recovery of three different-sized plasmids on membrane sheets. It is recommended that further efforts to improve plasmid recoveries from anion-exchange membranes focus on properties of the adsorbent surface.     

Humic Acid Removal by Combining the Magnetic Property of Maghemite with the Adsorption Property of Nanosized Hydroxyapatite

Maghemite incorporated hydroxyapatite (HAP) nanocomposite was prepared by in situ precipitation of the calcium phosphate phase in an iron oxide colloidal suspension. The resultant nanocomposite was characterized by x-ray diffraction, Fourier transform infrared spectrometer, transmission electron microscope, N₂ adsorption analysis, and vibrating sample magnetometry. The potential of HAP/γ-Fe₂O₃ nanocomposite for HA adsorption from aqueous solution was evaluated by batch experiments and adsorption kinetic tests. HA adsorption amount on the adsorbent decreased with increasing solution pH and the presence of KNO₃ and alkali-earth metal ions resulted in enhanced HA adsorption. HA adsorption onto HAP/γ-Fe₂O₃ nanocomposite could be well described by Freundlich and Sips models, while HA adsorption process on the adsorbent obeyed pseudo-second-order kinetics and the adsorption rates decreased with increasing initial HA concentration. This study showed that the HAP/γ-Fe₂O₃ nanocomposite could be used as an efficient and magnetically separable adsorbent for the removal of HA from aqueous solution. Subsequent studies demonstrated that the HA-loaded HAP/γ-Fe₂O₃ nanocomposite could be further applied for the highly efficient adsorption of methylene blue (MB) and separated from the medium by a simple magnetic process.     

Performance of a non-grafted monolithic support for purification of supercoiled plasmid DNA

The use of therapeutics based on plasmid DNA (pDNA) relies on procedures that efficiently produce and purify the supercoiled (sc) plasmid isoform. Several chromatographic methods have been applied for the sc plasmid purification, but with most of them it is not possible to obtain the required purity degree and the majority of the supports used present low capacity to bind the plasmid molecules. However, the chromatographic monolithic supports are an interesting alternative to conventional supports due to their excellent mass transfer properties and their high binding capacity for pDNA. The separation of pDNA isoforms, using short non-grafted monolithic column with CarbonylDiImidazole (CDI) functional groups, is described in the current work. The effect of different flow rates on plasmid isoforms separation was also verified. Several breakthrough experiments were designed to study the effect of different parameters such as pDNA topology and concentration as well as flow rate on the monolithic support binding capacity. One of the most striking results is related to the specific recognition of the sc isoform by this CDI monolith, without flow rate dependence. Additionally, the binding capacity has been found to be significantly higher for sc plasmid, probably because of its compact structure, being also improved when using feedstock with increased plasmid concentrations and decreased linear velocity. In fact, this new monolithic support arises as a powerful instrument on the sc pDNA purification for further clinical applications.     

Effect of chromatographic conditions and plasmid DNA size on the dynamic binding capacity of a monolithic support

DNA therapies are becoming recognized alternatives for the treatment and prevention of severe pathologies. Although most current trials have used plasmids <10 kbp, in the future larger plasmids would be required. The purpose of this work was to study the chromatographic behavior of nongrafted carbonyldiimidazole monolithic disks using plasmids with different sizes under hydrophobic conditions. Thereunto, the purification of several plasmids was performed. Higher size plasmids needed lower ammonium sulfate concentration, due to the greater number of interactions between the plasmids and monolith. The dynamic binding capacity experiments for the different plasmids revealed a lower capacity for bigger plasmids. It was also verified that the increase of salt concentration from 2.5 to 3 M of ammonium sulfate increased the capacity. At the highest salt concentration, a slight improvement in the capacity using lower flow rate was observed, possibly due to compaction of plasmid molecules and its better organization on the monolith channels. Finally, a low pH also had a positive effect on the capacity. So, this monolithic support proved to be appropriate to purify the supercoiled isoform of different plasmids with different sizes, providing a valuable instrument as a purification technique.     

核酸检测的校正在二氧化硅吸附等温线中的应用

利用在高盐环境下氧化硅微球表面对核酸的选择性吸附分离纯化核酸已成为一种较为普遍的核酸固相提取方法,简单准确地测量高盐溶液中的核酸浓度,是研究DNA吸附性能的关键.通过制作标准曲线的方法, 校正含高浓度盐溶液中的DNA浓度,计算得到校正系数k,提出了一种检测SiO2对DNA单位吸附量的简便方法--参比法.与传统方法相比,此方法不须脱盐纯化即可方便地绘制出了SiO2微球对鲑鱼精DNA的吸附等温线,为DNA吸附载体的研究奠定了方法学基础.     

Size exclusion chromatography of plasmid DNA isoforms

There is considerable interest in using size exclusion chromatography (SEC) to analyze and purify specific plasmid isoforms, but there is currently no fundamental understanding of the effects of plasmid size and morphology on plasmid behavior in SEC. Experiments were performed for plasmids from 3.0 to 17.0 kbp in size. The linear and open-circular isoforms were generated from the supercoiled plasmid by appropriate enzymatic digestion. SEC retention data were obtained using a Sephacryl S-1000 SF resin packed column and an Agilent HPLC system over a range of flow rates using buffers of different ionic strength and composition. The plasmid partition coefficients, K_P, were evaluated from the first statistical moment of the chromatographic peak. The partition coefficient decreased with increasing plasmid size as expected; K_P varied from 0.299 to 0.045 for supercoiled plasmids of 3.0 to 17.0 kbp. The partition coefficient also increased with increasing ionic strength due to the compaction of the DNA associated with the shielding of the intramolecular electrostatic interactions. For any plasmid size, the supercoiled isoform had the highest K_P followed by the open-circular and then the linear isoform, consistent with independent estimates of the plasmid radius of gyration as determined by static light scattering. The experimental data were analyzed using available theoretical models for the partitioning of linear and cyclic polymer chains in well-defined pore geometries. These results provide important insights into the behavior of different plasmid isoforms in size exclusion chromatography.     

染料的生物污泥吸附

综述了活性污泥、厌氧污泥、干污泥、不同方法失活的污泥等对42种染料的吸附结果,并对生物污泥吸附过程中适用的吸附等温线进行了总结,同时讨论了pH、温度、染料初始浓度、干污泥的粒径、离子强度、生物污泥有无活性等因素对生物污泥吸附的影响,并对今后的研究重点进行了展望。     

Adsorption of Zinc and Cyanide from Cyanide Effluents on Anionic Ion-exchange Resin

The adsorption of zinc and cyanide from cyanide effluents onto strong and weak basic anion exchange resins was studied in a batch adsorption system. Factors influencing the adsorption rates such as resin selection, resin amounts, contact time and temperature were studied and scanning electron microscopy-energy disperse spectroscopy(SEM-EDS) was used in the analysis. The present study shows that the adsorption capacity of resin 201×7 is better than that of resin 301. The adsorption process was relatively fast and came to equilibrium after 60 min. The kinetic data were analyzed with three models and the pseudo-second-order kinetic model was found to agree with the experimental data well. The equilibrium data could also be described well by Langmuir isotherm model. Thermodynamic parameters such as enthalpy change(ΔH⁰), free energy change(ΔG⁰) and entropy change(ΔS⁰) were calculated and the adsorption process was spontaneous and endothermic.     

Supercoiled plasmid DNA purification by integrating membrane technology with a monolithic chromatography

The present study describes the integration of membrane technology with monolithic chromatography to obtain plasmid DNA with high quality. Isolation and clarification of plasmid DNA lysate were first conducted by a microfiltration step, by using a hydrophilic nylon microfiltration membrane, avoiding the need of centrifugation. For the total elimination of the remaining impurities, a suitable purification step is required. Monolithic stationary phases have been successfully applied as an alternative to conventional supports. Thus, the sample recovered from the membrane process was applied into a nongrafted CarbonylDiImidazole disk. Throughout the global procedure, a reduced level of impurities such as proteins and RNA was obtained, and no genomic DNA was detectable in the plasmid DNA sample. The chromatographic process demonstrated an efficient performance on supercoiled plasmid DNA purity and recovery (100 and 84.44%, respectively). Thereby, combining the membrane technology to eliminate some impurities from lysate sample with an efficient chromatographic strategy to purify the supercoiled plasmid DNA arises as a powerful approach for industrial‐scale systems aiming at plasmid DNA purification.     

Hydrophobic interaction membrane chromatography for plasmid DNA purification: Design and optimization

Chromatography is one of the key operations in the downstream processing of plasmid DNA (pDNA). However, the increased demand for highly purified pDNA experienced in recent years has made clear the need for alternative processes capable of retaining the advantages of conventional chromatography, such as selectivity, while providing increased throughput at a lower cost. The work presented in this article outlines the development and optimization of an alternative hydrophobic interaction membrane chromatography process for the purification of pDNA. The studies included the modification of functionalized membrane supports with a linear alkyl chain ligand and the testing of chromatographic performance of these membranes. Three modification procedures were tested and the membranes were screened for their capacity and selectivity. The modified membranes could separate the model plasmid pVAX1‐LacZ (6050 bp) from impurities in clarified Escherichia coli cell lysates (specifically RNA), with good resolution. Subsequent optimization of elution profiles with the best‐performing modified membrane, resulted in a high purification factor of 4.7, competitive with its bead process counterpart, and a plasmid yield of 73%.     

Adsorption behavior and mechanism of Cu(II) onto carbonate-substituted hydroxyapatite in the presence of humic acid

In this study, adsorption behavior and mechanism of Cu(II) onto carbonate-substituted hydroxyapatite (CHAP) in the absence and presence of humic acid (HA) were studied in batch experiments. The results showed that carbonate incorporation in HAP could significantly enhance the adsorption of Cu(II). In ternary systems, the presence of HA led to an increase in Cu(II) adsorption, dependent on HA concentration. Kinetic studies showed that pseudo-second-order kinetic model better described the adsorption process of Cu(II) onto CHAP and equilibrium data were best described by Sips models. The order of addition sequences of substrates was found to have a noticeable effect on Cu(II) adsorption onto CHAP. The general trend with respect to Cu(II) adsorption being: (CHAP–Cu)–HA?>?(CHAP–HA)–Cu?>?(Cu–HA)–CHAP. The present findings were important for estimating and optimizing the removal of Cu(II) ions by using CHA as a potential adsorbent.     

Monolith-based immobilized metal affinity chromatography increases production efficiency for plasmid DNA purification

Immobilized metal affinity monolith column as a new class of chromatographic support is shown to be superior to conventional particle-based column as plasmid DNA (pDNA) purification platform. By harnessing the affinity of endotoxin to copper ions in the solution, a majority of endotoxin (90%) was removed from the alkaline cell lysate using CuCl(2)-induced precipitation. RNA and remaining endotoxin were subsequently removed to below detection limit with minimal loss of pDNA using either monolith or particle-based column. Monolith column has the additional advantage of feed concentration and flowrate-independent dynamic binding capacity for RNA molecules, enabling purification process to be conducted at high feed RNA concentration and flowrate. The use of monolith column gives three fold increased productivity of pDNA as compared to particle-based column, providing a more rapid and economical platform for pDNA purification.     

An electrochemical study of safranin O binding to DNA at the surface

The interaction of safranin O (SO) with double-stranded calf thymus DNA was investigated electrochemically, using a DNA-modified glassy carbon (GC-DNA) electrode. The results were compared with those obtained using a bare GC electrode. The formal potential of SO was more negative when using the GC-DNA electrode, although the rate of heterogeneous electron transfer was not altered. The GC-DNA electrode enabled preconcentration of the SO on the electrode surface, despite the fact that the mass transfer effects in the thin DNA layer adsorbed on the surface were still observed. The diffusion coefficient of SO and the binding ratio for the oxidized and reduced forms of the bound species were obtained. A binding isotherm for SO at the GC-DNA electrode was plotted from coulometric titrations, giving a binding constant of 5.8×10⁴ L mol⁻¹.     

Application of monoliths for plasmid DNA purification development and transfer to production

The demand of high-purity plasmid DNA (pDNA) for gene-therapy and genetic vaccination is still increasing. For the large scale production of pharmaceutical grade plasmids generic and economic purification processes are needed. Most of the current processes for pDNA production use at least one chromatography step, which always constitutes as the key-step in the purification sequence. Monolithic chromatographic supports are an alternative to conventional supports due to their excellent mass transfer properties and their high binding capacity for pDNA. Anion-exchange chromatography is the most popular chromatography method for plasmid separation, since polynucleotides are negatively charged independent of the buffer conditions. For the implementation of a monolith-based anion exchange step into a pDNA purification process detailed screening experiments were performed. These studies included supports, ligand-types and ligand-densities and optimization of resolution and productivity. For this purpose model plasmids with a size of 4.3 and 6.9 kilo base pairs (kbp) were used. It could be shown, that up-scaling to the production scale using 800 ml CIM Convective Interaction Media radial flow monoliths is possible under low pressure conditions. CIM DEAE was successfully implemented as intermediate step of the cGMP pDNA manufacturing process. Starting from 2001 fermentation aliquots pilot scale purification runs were performed in order to prove scale-up and to predict further up-scaling to 8 1 tube monolithic columns. The analytical results obtained from these runs confirmed suitability for pharmaceutical applications.     

Comparison of Adsorption Isotherms of Methylxanthines on C18 Column

A comparison of the adsorption isotherms of caffeine, theophylline and theobromine and the competitive adsorption of the three compounds on a C 18 column were investigated. The experimental parameters of the equilibrium isotherms were estimated by linear and nonlinear regression analyses. The linear equation as a function of the adsorption concentration of the single compound in its solution and the competitive adsorption of a single compound in a mixed solution were then determined. The adsorption equilibrium data were then correlated to the linear, Langmuir, Freundlich, Langmuir-Freundlich and stoichiometric displacement theory for adsorption(SDT-A) isotherm models. The mixed compounds of the three compounds were competitively adsorbed on the C 18 particles. The expression of stoichiometric displacement theory for adsorption was found to be more suitable for adsorption of methylxanthines on a C 18 column.     

Comparative Adsorption of Lead(II) on Flake and Bead‐Types of Chitosan

The adsorption of Pb(II) ions from aqueous solutions by chitosan flakes and beads was studied. The chitosan beads were prepared by casting an acidic chitosan solution into alkaline solution. Experiments were carried out as a function of pH, agitation period and initial concentration of Pb²⁺ ions. The uptake of Pb²⁺ ions from aqueous solution was determined from changes in concentration as measured by atomic absorption spectroscopy. The maximum uptake of Pb²⁺ ions on chitosan beads was greater than that on chitosan flakes. Adsorption isothermal data could be interpreted by the Langmuir equation. The experimental data of the adsorption equilibrium from Pb²⁺ ion solutions correlated well with the Langmuir isotherm equation. SEM analyses were also conducted for visual examination of the chitosan flakes and beads. Physical properties including surface area and average pore diameter were characterized by N₂ adsorption experiment.     

Adsorption properties and mechanism of sepiolite to graphene oxide in aqueous solution

Graphene oxide (GO) is widely used in various fields such as improving the performance of cement-based materials and making composite materials due to its large specific surface area and abundant oxygen-containing functional groups. However, it has also caused water pollution. To remove GO in aqueous solution, sepiolite (SEP) was used to adsorb it. The effects of pH, adsorbent quality, GO concentration, temperature and adsorption time on the ability of SEP to adsorb GO were investigated. The materials were characterized by SAP and laser particle size analyzer, and the adsorption performance and mechanism of SEP for GO were further analyzed by XRD, FTIR, SEM, TEM, XPS, AFM, and Zeta potential microscopic tests. The results showed that: 1) Under the conditions of temperature 303 K, pH = 3, adsorbent mass 30 mg, and initial concentration of GO 100 mg/L, the adsorption effect was the best, and the adsorption rate reached 94.8 %. 2) The adsorption reached equilibrium at 2160 min, and the adsorption process was more in line with the pseudo-second-order adsorption kinetic equation, and the adsorption behavior was controlled by chemical effects. 3) The adsorption of SEP to GO is more consistent with the Langmuir and Temkin adsorption isotherm model, and the reaction is a spontaneous, endothermic, and entropy-increasing process. Experiments showed that SEP had a strong adsorption capacity for GO, which provides a reference for the treatment of toxic GO in aqueous solution and the realization of water ecological protection.     

Catalytic hydrolysis of phosphate diester （BNPP） and plasmid DNA by mononuclear macrocyclic polyamine metal complexes

The activities of the catalytic hydrolysis of phosphate diester(BNPP)[bis(p-nitrophenyl)phosphate diester]and plasmid DNA (pUC18)by mononuclear macrocyclic polyamine metal complexes have been investigated in this paper.The results showed that the highest activity in hydrolysis of BNPP was obtained with 1e-Zn(Ⅱ)complex(composed of lipophilic group)as catalyst.The hydrolysis rate enhancement is up to 3.64×10~4 fold.These metal complexes could effectively promote the cleavage of plasmid DNA(pUC18)at physiol...