Mechanism of glucose oxidation by quinoprotein soluble glucose dehydrogenase: insights from molecular dynamics studies

We have generated 3 ns molecular dynamic (MD) simulations, in aqueous solution, of the bacterial soluble glucose dehydrogenase enzyme.PQQ.glucose complex and intermediates formed in PQQ reduction. In the MD structure of enzyme.PQQ.glucose complex the imidazole of His144 is hydrogen bonded to the hydroxyl hydrogen of H[bond]OC1(H) of glucose. The tightly hydrogen-bonded triad Asp163-His144-glucose (2.70 and 2.91 A) is involved in proton abstraction from glucose concerted with the hydride transfer from the C1[bond]H of glucose to the >C5[double bond]O quinone carbon of PQQ. The reaction is assisted by Arg228 hydrogen bonding to the carbonyl oxygen of >C5[double bond]O. The rearrangement of [bond](H)C5(O-)[bond]C4([double bond]O)[bond] of II to [bond]C5(OH)[double bond]C4(OH)[bond] of PQQH(2) hydroquinone is assisted by general acid protonatation of the >C4[double bond]O oxygen by protonated His144 and hydrogen bonds of Arg228 to the oxyanion O5. The continuous hydrogen bonding of the amide side chain of Asn229 to >C4[double bond]O4 oxygen and that of the O5 oxygen of the cofactor to Wat89 is observed throughout the entire reaction.     

Electroswitchable photoluminescence activity: synthesis, spectroscopy, electrochemistry, photophysics, and X-ray crystal and electronic structures of [Re(bpy)(CO)3(C[triple bond]C[bond]C6H4[bond]C[triple bond]C)Fe(C5Me5)(dppe)][PF6](n) (n = 0, 1)

A novel heterobimetallic alkynyl-bridged complex, [Re(bpy)(CO)(3)(C[triple bond]C[bond]C(6)H(4)[bond]C[triple bond]C)Fe(C(5)Me(5))(dppe)], 1, and its oxidized species, [Re(bpy)(CO)(3)(C[triple bond]C[bond]C(6)H(4)[bond]C[triple bond]C)Fe(C(5)Me(5))(dppe)][PF(6)], 2, have been synthesized and their X-ray crystal structures determined. A related vinylidene complex, [Re(bpy)(CO)(3)(C[triple bond]C[bond]C(6)H(4)[bond](H)C[double bond]C)Fe(C(5)Me(5))(dppe)][PF(6)], 3, has also been synthesized and characterized. The cyclic voltammogram of 1 shows a quasireversible reduction couple at -1.49 V (vs SCE), a fully reversible oxidation at -0.19 V, and a quasireversible oxidation at +0.88 V. In accord with the electrochemical results, density-functional theory calculations on the hydrogen-substituted model complex Re(bpy)(CO)(3)(C[triple bond]C[bond]C(6)H(4)[bond]C[triple bond]C)Fe(C(5)H(5))(dHpe) (Cp = C(5)H(5), dHpe = H(2)P[bond](CH(2))(2)[bond]PH(2)) (1-H) show that the LUMO is mainly bipyridine ligand pi* in character while the HOMO is largely iron(II) d orbital in character. The electronic absorption spectrum of 1 shows low-energy absorption at 390 nm with a 420 nm shoulder in CH(2)Cl(2), while that of 2 exhibits less intense low-energy bands at 432 and 474 nm and additional low-energy bands in the NIR at ca. 830, 1389, and 1773 nm. Unlike the related luminescent rhenium(I)-alkynyl complex [Re(bpy)(CO)(3)(C[triple bond]C[bond]C(6)H(4)[bond]C[triple bond]C[bond]H)], 4, complex 1 is found to be nonemissive, and such a phenomenon is attributed to an intramolecular quenching of the emissive d pi(Re) --> pi*(bpy) (3)MLCT state by the low-lying MLCT and LF excited states of the iron moiety. Interestingly, switching on of the luminescence property derived from the d pi(Re) --> pi*(bpy) (3)MLCT state can be demonstrated in the oxidized species 2 and the related vinylidene analogue 3 due to the absence of the quenching pathway.     

C[bond]H- - -O hydrogen bonds in beta-sheetlike networks: combined X-ray crystallography and high-pressure infrared study

Close interactions of the C(alpha)[bond]H- - -O type have been analyzed via X-ray crystallography and high-pressure infrared spectroscopy. The results demonstrate that the C(alpha)[bond]H- - -O interactions can offer an additional stability to the beta-sheet formation. X-ray structural data suggest that while 1-acetamido-3-(2-pyrimidinyl)-imidazolium bromide exhibits a bilayer stacking, the PF(6)(-) salt reveals a beta-sheetlike pattern. The appearance of the free-NH infrared absorption indicates that the conventional N[bond]H- - -O or N[bond]H- - -N hydrogen bonds do not fully dominate the packing for the PF(6)(-) salt. The high-pressure infrared study suggests that the C(alpha)[bond]H- - -O hydrogen bonds are the important determinants for the stability of the PF(6)(-) salt. This study also verifies that the imidazolium C[bond]H stretching frequency shifts to a longer wavelength upon the formation of the C[bond]H- - -O hydrogen bonds.     

Electronic structures and spectroscopic properties of nitrido-osmium(VI) complexes with acetylide ligands [OsN(C[Triple Bond]CR)4]- R=H, CH3, and Ph by density functional theory calculation

Electronic structures and spectroscopic properties of a series of nitrido-osmium (VI) complex ions with acetylide ligands, [OsN(C[Triple Bond]CR)(4)](-) (R[Double Bond]H, (1), CH(3) (2), and Ph (3)) were investigated theoretically. The structures of the complexes were fully optimized at the B3LYP and CIS level for the ground states and excited states, respectively. The calculated bond lengths of Os[Triple Bond]N (1.639 A in 1, 1.642 A in 2, and 1.643 A in 3) and Os-C (2.040 A in 1, 2.043 A in 2, and 2.042 A in 3) in ground state agree well with the experimental results. The bond length of Os[Triple Bond]N bond is lengthened by ca. 0.13 A in the A (3)B(2) excited state compared to the (1)A(1) ground state, which is consistent with the lower vibration frequency of nu(Os-N) ( approximately 780 cm(-1)) in the excited state than that ( approximately 1175 cm(-1)) in the ground state. Among the calculated dipole-allowed absorptions at lambda>250 nm, the intense absorption at 261 nm for 1, 266 nm for 2, and 300 nm for 3 were attributed to the (1)[pi(C[Triple Bond]C)]-->(1)[pi(*)(N[Triple Bond]Os)+pi(*)(C[Triple Bond]C)], (1)[pi(C[Triple Bond]C)]-->(1)[pi(*)(N[Triple Bond]Os)+pi(*)(C[Triple Bond]C)], and (1)[pi(C[Triple Bond]CPh)]-->(1)[pi(*)(N[Triple Bond]Os)+pi(*)(C[Triple Bond]CPh)], respectively. The lowest energy absorption at lambda(max)=393 nm for 1, 400 nm for 2, and 400 nm for 3 were assigned as (1)[d(xy)(Os)+pi(C[Triple Bond]C)]-->(1)[pi(*)(N[Triple Bond]Os)+pi(*)(C[Triple Bond]C)], (1)[d(xy)(Os)+pi(C[Triple Bond]C)]-->(1)[pi(*)(N[Triple Bond]Os)+pi(*)(C[Triple Bond]C)], and (1)[d(xy)(Os)+pi(C[Triple Bond]CPh)]-->(1)[pi(*)(N[Triple Bond]Os)+pi(*)(C[Triple Bond]CPh)], respectively. The calculated phosphorescence emission at lambda(max)=581 nm for 1, 588 nm for 2, and 609 nm for 3 were originated from (3)[(pi(*)(N[Triple Bond]Os)+pi(*)(C[Triple Bond]C))(1)(d(xy)(Os)+pi(C[Triple Bond]C))(1)], (3)[(pi(*)(N[Triple Bond]Os)+pi(*)(C[Triple Bond]C))(1)(d(xy)(Os)+pi(C[Triple Bond]C))(1)], and (3)[(pi(*)(N[Triple Bond]Os)+pi(*)(C[Triple Bond]CPh))(1)(d(xy)(Os)+pi(C[Triple Bond]CPh))(1)] excited state, respectively.     

Structures and redox reactivities of copper complexes of (2-pyridyl)alkylamine ligands. Effects of the alkyl linker chain length

Ligand effects on the structures and redox reactivities of copper complexes have been examined using (2-pyridyl)alkylamine derivatives as the supporting ligands, where particular attention has been focused on the effects of the alkyl linker chain length connecting the tertiary amine nitrogen atom and the pyridine nucleus: N[bond]CH(2)[bond]Py (Pym) vs N[bond]CH(2)CH(2)[bond]Py (Pye). X-ray crystallographic analysis of the copper(I) complex of tridentate ligand (Phe)L(Pym2) [N,N-di(2-pyridylmethyl)-2-phenylethylamine] (complex 1) has demonstrated that it possesses a trigonal pyramidal geometry in which a d[bond]pi interaction with an eta(1)-binding mode exists between the metal ion and one of the ortho carbons of the phenyl ring of the ligand side arm (phenethyl). The result shows sharp contrast to the d[bond]pi interaction with an eta(2)-binding mode existing in the copper(I) complex of (Phe)L(Pye2) [N,N-di[2-(2-pyridyl)ethyl]-2-phenethylamine] (complex 2). Such a d-pi interaction has been shown to affect the stability of the copper(I) complex in CH(2)Cl(2). Oxygenation of copper(I) complex 1 supported by (Phe)L(Pym2) produces a bis(mu-oxo)dicopper(III) complex, also being in sharp contrast to the case of the copper(I) complex 2 with ligand (Phe)L(Pye2), which preferentially affords a (micro-eta(2):eta(2)-peroxo)dicopper(II) complex in the reaction with O(2). Such an effect of the alkyl linker chain length of the metal binding site has also been found to operate in the RSSR (disulfide)/2RS(-) (thiolate) redox system. Namely, ligand (S2,R)L(Pym1) (di[2-[(alkyl)(2-pyridinylmethyl)amino]ethyl] disulfide) with the methylene linker group (Pym) induced the reductive disulfide bond cleavage in the reaction with copper(I) ion to give a bis(micro-thiolato)dicopper(II) complex, while the ligand with the ethylene linker group (Pye), (S2,Bn)L(Pye1) (di[2-[(benzyl)(2-(2-pyridinyl)ethyl)amino]ethyl] disulfide), gave a disulfide-dicopper(I) complex. These ligand effects in the Cu(2)[bond]O(2) and Cu(2)[bond]S(2) systems have been discussed by taking into account the difference in electron-donor ability of the pyridine nucleus between the Pym and Pye ligand systems.     

From weak interactions to covalent bonds: a continuum in the complexes of 1,8-bis(dimethylamino)naphthalene

Experimental charge density distributions in a series of ionic complexes of 1,8-bis(dimethylamino)naphthalene (DMAN) with four different acids: 1,2,4,5-benzenetetracarboxylic acid (pyromellitic acid), 4,5-dichlorophthalic acid, dicyanoimidazole, and o-benzoic sulfimide dihydrate (saccharin) have been analyzed. Variation of charge density properties and derived local energy densities are investigated, over all inter- and intramolecular interactions present in altogether five complexes of DMAN. All the interactions studied [[O...H...O](-), C[bond]H...O, [N[bond]H...N](+), O[bond]H...O, C[bond]H...N, C pi...N pi, C pi...C pi, C[bond]H...Cl, N[bond]H(+)] follow exponential dependences of the electron density, local kinetic and potential energies at the bond critical points on the length of the interaction line. The local potential energy density at the bond critical points has a near-linear relationship to the electron density. There is also a Morse-like dependence of the laplacian of rho on the length of interaction line, which allows a differentiation of ionic and covalent bond characters. The strength of the interactions studied varies systematically with the relative penetration of the critical points into the van der Waals spheres of the donor and acceptor atoms, as well as on the interpenetration of the van der Waals spheres themselves. The strong, charge supported hydrogen bond in the DMANH(+) cation in each complex has a multicenter character involving a [[Me(2)N[bond]H....NMe(2)](+)....X(delta-)] assembly, where X is the nearest electronegative atom in the crystal lattice.     

The behavior of transition metal nitrido bonds towards protonation rationalized by means of localized bonding schemes and their weights

A new computational scheme is applied to rationalize the different protonation behaviors of the nitrido complexes [L'Mn(V)(N)(acac)](+), [LCr(V)(N)(acac)](+), and [LV(V)(N)(acac)](+). L and L' represent the macrocycles 1,4,7-triazacyclononane and its N-methylated derivative, respectively, and acac is the bidentate monoanion pentane-2,4-dionate. The bonds of the complexes are partitioned into bonds to be investigated and bonds of lesser interest. The investigated bonds are the transition metal nitrido bonds M(V)[triple chemical bond]N| (M = Mn, Cr, and V) and the bonds of lesser interest are located in the ligands. The ligand bonds are described by means of the strongly occupied natural bond orbitals. The electrons in the M(V)[triple chemical bond]N| nitrido bonds, however, are treated more accurately. A full configuration interaction procedure is applied in the space spanned by the strongly occupied natural bond orbitals and their corresponding antibonding orbitals. Localized bonding schemes and their weights are obtained for the d(pi)-p(pi) bonds of interest. This is achieved by representing the two-center natural bond orbitals for a d(pi)-p(pi) bond by the one-center natural hybrid orbitals localized at the bond atoms. The obtained bonding schemes are close to orthogonal valence bond structures. Their weights indicate that the nitrido nitrogen in [LV(V)(N)(acac)](+) is more easily protonated than the nitrido nitrogens in [L'Mn(V)(N)(acac)](+) and [LCr(V)(N)(acac)](+). This result is in good accord with experiment.     

Hydrogen bonding due to regioisomerism and its effect on the supramolecular architecture of diethyl 2‐[(2/4‐hydroxyanilino)methylidene]malonates

Diethyl 2‐[(2‐hydroxyanilino)methylidene]malonate, (I), and diethyl 2‐[(4‐hydroxyanilino)methylidene]malonate, (II), both C₁₄H₁₇NO₅, crystallize in centrosymmetric orthorhombic and monoclinic crystal systems, respectively. Compound (I) resides on a crystallographic mirror plane and displays bifurcated intramolecular hydrogen bonding, as well as intermolecular hydrogen bonding due to the position of the hydroxy group. Compound (II) has a single intramolecular N—H...O hydrogen bond. Infinite one‐dimensional head‐to‐tail chains formed by O—H...O hydrogen bonding are present in both structures. The molecular packing is mainly influenced by the intermolecular O—H...O interactions. Additionally, C—H...O interactions crosslinking the chains are found in (II).     

Novel reactivity mode of hydroxamic acids: a metalla-pinner reaction

The reaction between the nitrile complex trans-[PtCl(4)(EtCN)(2)] and benzohydroxamic acids RC(6)H(4)C([double bond]O)NHOH (R = p-MeO, p-Me, H, p-Cl, o-HO) proceeds smoothly in CH(2)Cl(2) at approximately 45 degrees C for 2-3 h (sealed tube) or under focused 300 W microwave irradiation for approximately 15 min at 50 degrees C giving, after workup, good yields of the imino complexes [PtCl(4)[NH[double bond]C(Et)ON[double bond]C(OH)(C(6)H(4)R)](2)] which derived from a novel metalla-Pinner reaction. The complexes [PtCl(4)[NH[double bond]C(Et)ON[double bond]C(OH)(C(6)H(4)R)](2)] were characterized by elemental analyses (C, H, N), FAB mass spectrometry, and IR and (1)H and (13)C[(1)H] spectroscopies, and [PtCl(4)[NH[double bond]C(Et)ON[double bond]C(OH)(Ph)](2)] (as the bis-dimethyl sulfoxide solvate), by X-ray single-crystal diffraction. The latter disclosed its overall trans-configuration with the iminoacyl species in the hydroximic tautomeric form in E-configuration which is held by N[bond]H...N hydrogen bond between the imine [double bond]NH atom and the hydroximic N atom.     

Supramolecular architectures assembled by the interaction of purine nucleobases with metal-oxalato frameworks. Non-covalent stabilization of the 7H-adenine tautomer in the solid-state

The synthesis, crystal structure and variable-temperature magnetic measurements of the compounds [Mn(mu-ox)(H2O)(7H-pur-kappaN9)]n (1), {[Mn(mu-ox)(H2O)2].(7H-ade).(H2O)}n (2) and {[Cu(mu-ox)(H2O)(7H-ade-kappaN9)][Cu(mu-ox)(mu-H2O)(7H-ade-kappaN9)]. approximately 10/3H2O}n (3), (where ox: oxalato dianion, pur: purine, and ade: adenine) are reported. Compounds 1and 2 contain one-dimensional chains in which manganese(II) atoms are bridged by bis-bidentate oxalato ligands. The distorted octahedral geometry around each metal centre is completed in compound 1 by one water molecule and the imidazole N9 donor site of the purine ligand, which is a rare example of direct binding between the Mn(II) ion and the N donor site of an isolated nucleobase. Unlike 1, the adenine moiety in compound 2 is not bonded to manganese atoms and the metal coordination polyhedron is filled by two water molecules in a cis-arrangement. Its crystal building is constructed from pi-stacked layers of Watson-Crick hydrogen-bonded adenine...(H2O2)...adenine aggregates and zig-zag Mn(II)-oxalato chains held together by means of a strong network of hydrogen bonding interactions. The nucleobase exists in the lattice as the 7H-adenine tautomer which represents an unprecedented solid-state characterization of this minor tautomer as free molecule (without metal coordination) stabilized through non-covalent interactions. Compound consists of two slightly different [Cu(ox)(H2O)(7H-ade-kappaN9)] units in which the nucleobase coordinates through the imidazole N9 atom. The planar complex entities are parallel stacked and joined by means of long Cu-O bonds involving oxygen atoms from the oxalato and the aqua ligands, giving one-dimensional chains with a [4 + 1] square-planar pyramidal and a [4 + 2] octahedral coordination around the metal centre, respectively. Self-assembled process of compound 3 is further driven by an in-plane network of hydrogen bonding interactions to generate a porous 3D structure containing parallel channels filled by guest water molecules. Variable-temperature magnetic susceptibility measurements of all the complexes show the occurrence of antiferromagnetic interactions between the paramagnetic centres. DFT calculations have been performed to check the influence of packing in the stability of the 7H-amino tautomer of 2 and in the complex geometry of 3.     

Tristhiolatomolybdenum nitrides, (RS)(3)Mo[triple bond]N where R = (i)Pr and (t)Bu,preparation, characterization and comparisons with related trialkoxymolybdenumnitrides

The addition of thiols to ((t)BuO)(3)Mo[triple bond]N in toluene leads to the formation of (RS)(3)Mo[triple bond]N compounds as yellow, air-sensitive compounds, where R = (i)Pr and (t)Bu. The single-crystal structure of ((t)BuS)(3)Mo[triple bond]N reveals a weakly associated dimeric structure where two ((t)BuS)(3)Mo[triple bond]N units (Mo-N = 1.61 A, Mo-S = 2.31 A (av)) are linked via thiolate sulfur bridges with long 3.03 A (av) Mo-S interactions. Density functional theory calculations employing Gaussian 98 B3LYP (LANL2DZ for Mo and 6-31G* for N, O, S, and H) have been carried out for model compounds (HE)(3)Mo[triple bond]N and (HE)(3)MoNO, where E = O and S. A comparison of the structure and bonding within the related series ((t)BuE)(3)Mo[triple bond]N and ((t)BuE)(3)MoNO is made for E = O and S. In the thiolate compounds, the highest energy orbitals are sulfur lone-pair combinations. In the alkoxides, the HOMO is the N 2p lone-pair which has M-N sigma and M-O pi* character for the nitride. As a result of greater O p pi to Mo pi interactions, the M-N pi orbitals of the Mo-N triple bond are destabilized with respect to their thiolate counterpart. For the nitrosyl compounds, the greater O p pi to Mo d pi interaction favors greater back-bonding to the nitrosyl pi* orbitals for the alkoxides relative to the thiolates. The results of the calculations are correlated with the observed structural features and spectroscopic properties of the related alkoxide and thiolate compounds.     

Unusual reactivity of methylene group adjacent to pyridine-2-carboxamido moiety in iron(III) and cobalt(III) complexes

The Fe(III) and Co(III) complexes of the ligand N-(2-picolyl)picolinamide (pmpH; H represents the dissociable amide hydrogen), namely, [Fe(pmp)(2)]BF(4) (1) and [Co(pmp)(2)]ClO(4) (2), have been synthesized and structurally characterized. The [bond]CH(2)[bond] moiety of pmp(-) in [M(pmp)(2)](+) (M = Fe, Co) is very reactive and is readily converted to carbonyl (C[double bond]O) group upon exposure to dioxygen. Such conversion results in [M(bpca)(2)]ClO(4) complexes (M = Fe (3), Co (5); bpcaH = bis(2-pyridylcarbonyl)amine) which have been characterized by spectroscopy and X-ray diffraction. The structure of 5 is reported here for the first time. The reactivity of the [bond]CH(2)[bond] moiety of pmp(-) has so far precluded the isolation of 1 although other metal complexes of pmp(-) have been reported years ago. The CH(2) --> C[double bond]O transformation arises from the tendency of the coordinated pmp(-) ligand to achieve further conjugation in the ligand framework and provides a better way to synthesize the metal complexes of bpcaH ligand. Reaction of 3 with NaH affords Fe(II) complex [Fe(bpca)(2)] (4) without any reduction of the ligand frame.     

Probing ruthenium-acetylide bonding interactions: synthesis, electrochemistry, and spectroscopic studies of acetylide-ruthenium complexes supported by tetradentate macrocyclic amine and diphosphine ligands

The synthesis and spectroscopic properties of trans-[RuL4(C[triple bond]CAr)2] (L4 = two 1,2-bis(dimethylphosphino)ethane, (dmpe)2; 1,5,9,13-tetramethyl-1,5,9,13-tetraazacyclohexadecane, 16-TMC; 1,12-dimethyl-3,4:9,10-dibenzo-1,12-diaza-5,8-dioxacyclopentadecane, N2O2) are described. Investigations into the effects of varying the [RuL4] core, acetylide ligands, and acetylide chain length for the [(-)C[triple bond]C(C6H4C[triple bond]C)(n-1)Ph] and [(-)C[triple bond]C(C6H4)(n-1)Ph] (n = 1-3) series upon the electronic and electrochemical characteristics of trans-[RuL4(C[triple bond]CAr)2](0/+) are presented. DFT and TD-DFT calculations have been performed on trans-[Ru(L')4(C[triple bond]CAr)2](0/+) (L' = PH3 and NH3) to examine the metal-acetylide pi-interaction and the nature of the associated electronic transition(s). It was observed that (1) the relationship between the transition energy and 1/n for trans-[Ru(dmpe)2{C[triple bond]C(C6H4C[triple bond]C)(n-1)Ph}2] (n = 1-3) is linear, and (2) the sum of the d(pi)(Ru(II)) --> pi*(C[triple bond]CAr) MLCT energy for trans-[Ru(16-TMC or N2O2)(C[triple bond]CAr)2] and the pi(C[triple bond]CAr) --> d(pi)(Ru(III)) LMCT energy for trans-[Ru(16-TMC or N2O2)(C[triple bond]CAr)2]+ corresponds to the intraligand pi pi* absorption energy for trans-[Ru(16-TMC or N2O2)(C[triple bond]CAr)2]. The crystal structure of trans-[Ru(dmpe)2{C[triple bond]C(C6H4C[triple bond]C)2Ph}2] shows that the two edges of the molecule are separated by 41.7 A. The electrochemical and spectroscopic properties of these complexes can be systematically tuned by modifying L4 and Ar to give E(1/2) values for oxidation of trans-[RuL4(C[triple bond]CAr)2] that span over 870 mV and lambda(max) values of trans-[RuL4(C[triple bond]CAr)2] that range from 19,230 to 31,750 cm(-1). The overall experimental findings suggest that the pi-back-bonding interaction in trans-[RuL4(C[triple bond]CAr)2] is weak and the [RuL4] moiety in these molecules may be considered to be playing a "dopant" role in a linear rigid pi-conjugated rod.     

Sulfur, tin and gold derivatives of 1-(2'-pyridyl)-ortho-carborane, 1-R-2-X-1,2-C2B10H10 (R = 2'-pyridyl, X = SH, SnMe3 or AuPPh3)

Reaction of the lithium salt of 1-(2'-pyridyl)-ortho-carborane, Li[1-R-1,2-C(2)B(10)H(10)](R = 2'-NC(5)H(4)), with sulfur, followed by hydrolysis, gave the mercapto-o-carborane, 1-R-2-SH-1,2-C(2)B(10)H(10) which forms chiral crystals containing helical chains of molecules linked by intermolecular S-H...N hydrogen bonds. The cage C(1)-C(2) and exo C(2)-S bond lengths (1.730(3) and 1.775(2)[Angstrom], respectively) are indicative of exo S=C pi bonding. The tin derivative 1-R-2-SnMe(3)-1,2-C(2)B(10)H(10), prepared from Li[1-R-1,2-C(2)B(10)H(10)] and Me(3)SnCl, crystallises with no significant intermolecular interactions. The pyridyl group lies in the C(1)-C(2)-Sn plane, oriented to minimise the NSn distance (2.861(3)[Angstrom]). The tin environment is distorted trigonal bipyramidal with axial N and Me. The gold derivative 1-R-2-AuPPh(3)-1,2-C(2)B(10)H(10), prepared from Li[1-R-1,2-C(2)B(10)H(10)] and AuCl(PPh(3)), reveals no NAu interaction in its crystal structure.     

Host-Guest Interactions of Inorganic Phosphates with the Copper(II) Complexes of the Hexaaza Macrocyclic Ligand 3,6,9,17,20,23-Hexaazatricyclo[23.3.1.1(11,15)]triaconta-1(29),11(30),12,14,25,27-hexaene

The host-guest interactions between ortho-, pyro-, and tripolyphosphate anions and the mono and dinuclear copper(II) complexes of the hexaaza macrocyclic ligand BMXD (3,6,9,17,20,23-hexaazatricyclo[23.3.1.1(11,15)]triaconta-1(29),11(30),12,14,25,27-hexaene) were investigated by potentiometric equilibrium methods. Ternary complexes are formed in aqueous solution as a result of coordinate bonding, hydrogen bond formation, and Coulombic attraction between the host and guest. Formation constants for all the species found are reported. The dinuclear copper(II) complexes of BMXD show strong selectivity for pyrophosphate ions in the presence of orthophosphate ions over the whole p[H] range; the pyrophosphate/tripolyphosphate selectivity is p[H] dependent. The dinuclear copper(II) complex of BMXD, (Cu(2)-BMXD)(SO(4))(2), crystallizes in the orthorhombic space group Pccn, with a = 15.73(2) ?, b = 20.27(1) ?, c = 9.045(5) ?, and Z = 4. The sulfate counterions are found to bridge the copper(II) ions in adjacent molecules leading to an extended polymeric structure.     

3d-Metal derivatives of the [Cu(I)(SO3)4]7- ion: structure and magnetism

The Cu(SO(3))(4)(7-) anion, which consists of a tetrahedrally coordinated Cu(I) centre coordinated to four sulfur atoms, is able to act as a multidentate ligand in discrete and infinite supramolecular species. The slow oxidation of an aqueous solution of Na(7)Cu(SO(3))(4) yields a mixed oxidation state, 2D network of composition Na(5){[Cu(II)(H(2)O)][Cu(I)(SO(3))(4)]}·6H(2)O. The addition of Cu(II) and 2,2'-bipyridine to an aqueous Na(7)Cu(SO(3))(4) solution leads to the formation of a pentanuclear complex of composition {[Cu(II)(H(2)O)(bipy)](4)[Cu(I)(SO(3))(4)]}(+); a combination of hydrogen bonding and π-π stacking interactions leads to the generation of infinite parallel channels that are occupied by disordered nitrate anions and water molecules. A pair of Cu(SO(3))(4)(7-) anions each act as a tridentate ligand towards a single Mn(II) centre when Mn(II) ions are combined with an excess of Cu(SO(3))(4)(7-). An anionic pentanuclear complex of composition {[Cu(I)(SO(3))(4)](2)[Fe(III)(H(2)O)](3)(O)} is formed when Fe(II) is added to a Cu(+)/SO(3)(2-) solution. Hydrated ferrous [Fe(H(2)O)(6)(2+)] and sodium ions act as counterions for the complexes and are responsible for the formation of an extensive hydrogen bond network within the crystal. Magnetic susceptibility studies over the temperature range 2-300 K show that weak ferromagnetic coupling occurs within the Cu(II) containing chains of Na(5){[Cu(II)(H(2)O)][Cu(I)(SO(3))(4)]}·6H(2)O, while zero coupling exists in the pentanuclear cluster {[Cu(II)(H(2)O)(bipy)](4)[Cu(I)(SO(3))(4)]}(NO(3))·H(2)O. Weak Mn(II)-O-S-O-Mn(II) antiferromagnetic coupling occurs in Na(H(2)O)(6){[Cu(I)(SO(3))(4)][Mn(II)(H(2)O)(2)](3)}, the latter formed when Mn was in excess during synthesis. The compound, Na(3)(H(2)O)(6)[Fe(II)(H(2)O)(6)](2){[Cu(I)(SO(3))(4)](2)[Fe(III)(H(2)O)](3)(O)}·H(2)O, contained trace magnetic impurities that affected the expected magnetic behaviour.     

Self-assembly using dynamic coordination chemistry and hydrogen bonding: mercury(II) macrocycles, polymers and sheets

The self-assembly of extended metal-containing arrays is described based on dynamic coordination chemistry at mercury(II) with bis(amidopyridyl) ligands to form macrocycles, polymers, or sheets which can be further organized by hydrogen bonding between amide substituents. The ligands 1,2-C6H4[NHC(O)-4-C5H4N]2, 1, 1,2-C(6)H(4)[C(O)NHCH(2)-4-C(5)H(4)N](2), 2, and 1,2-C(6)H(4)[CH(2)C(O)NHCH(2)-4-C(5)H(4)N]2, 3 can adopt polar conformations and so can confer helicity in their complexes. Several macrocycles of formula [(HgX(2))(2)(micro-LL)(2)] (LL = 1, 2), with tetrahedral mercury(II) centers, were prepared in which individual molecules are further self-assembled via hydrogen bonding in the solid state to form one- or two-dimensional polymers or sheets. In one case, a one-dimensional polymer [((HgX2)-(mu-3))n] was formed. It is shown that the mercury(II) centers can be six-coordinate in forming the sheet structure [((HgX2)(mu-2)2)n], in which there are particularly large pores.     

The pressure tunning Raman and IR spectral studies on the multinuclear metal carbyne complexes

The Raman and infrared (IR) spectra of four tungsten metal carbyne complexes I, II, IV and V [Cl(CO)2(L)W[triple bond]CC6H4[triple bond](C[triple bond]CC6H4)n[triple bond]N[triple bond]C[triple bond]]2M (L = TMEDA, n = 0, M = PdI2 or ReCl(CO)3; L = DPPE, n = 1, M = PdI2 or ReCl(CO)3) were studied at high external pressure. Their pressure-induced phase transitions were observed near 20kbar (complexes I), 15 kbar (complexes II), 25 kbar (complex IV) and 30 kbar (complex V). The pressure-induced phase transition likely is first order in complex I and the pressure-induced phase transitions of complexes II, IV and V are mostly second order. The pressure sensitivities d nu/dp of nu(W[triple bond]C) are high in the low-pressure phase area and very low in the high-pressure phase area due to the pressure strengthening pi back-bonding from metal W to pi* orbital of C[triple bond]O in fragment Cl(CO)2(L)W[triple bond]C. The pressure strengthening metal pi back-bonding from metal Re or Pd to pi* orbital of C[triple bond]O or C[triple bond]N also happened to both of central metal centers of NCPd(I2)CN in complex I and NCReCl(CO)3CN in complex II.     

Structures,vibrational frequencies,topologies, and energies of hydrogen bonds in cysteine‐formaldehyde complexes

The hydrogen bonding interactions between cysteine (Cys) and formaldehyde (FA) were studied with density functional theory regarding their geometries, energies, vibrational frequencies, and topological features of the electron density. The quantum theory of atoms in molecules and natural bond orbital analyses were employed to elucidate the interaction characteristics in the Cys‐FA complexes. The intramolecular hydrogen bonds (H‐bonds) formed between the hydroxyl and the N atom of cysteine moiety in some Cys‐FA complexes were strengthened because of the cooperativity. Most of intermolecular H‐bonds involve the O atom of cysteine/FA moiety as proton acceptors, while the strongest H‐bond involves the O atom of FA moiety as proton acceptor, which indicates that FA would rather accept proton than providing one. The H‐bonds formed between the CH group of FA and the S atom of cysteine in some complexes are so weak that no hydrogen bonding interactions exist among them. In most of complexes, the orbital interaction of H‐bond is predominant during the formation of complex. The electron density (ρ_b) and its Laplace (?²ρ_b) at the bond critical point significantly correlate with the H‐bond parameter δR, while a linearly relationship between the second‐perturbation energy E(2) and ρ_b has been found as well. © 2011 Wiley Periodicals, Inc. Int J Quantum Chem, 2012     

Grid-type two-dimensional magnetic multinuclear metal complex: strands of ([CuII(mu-4,4'-bpy)]2+)n cross-linked by octacyanotungstate(V) ions

Reaction of the preorganized strands of ([Cu(II)(mu-4,4'-bpy)](2+))n (4,4'-bpy = 4,4'-bipyridine) with [W(V)(CN)(8)](3)(-) leads to a novel cyano-bridged Cu(II)(3)W(V)(2) complex [Cu(mu-4,4'-bpy)(DMF)(2)][Cu(mu-4,4'-bpy)(DMF)](2)[W(V)(CN)(8)](2).2DMF. 2H(2)O 1. The structure of 1 consists of the expected 2-dimensional grid-type network which is built of infinite ([Cu(II)(mu-4,4'-bpy)](2+))n chains cross-linked by octacyanotungstate units. The Cu(II)-NC-W(V)-CN-Cu(II) linkage exhibits the topology of a 3,2-chain. The skeleton of the layer is additionally stabilized by a hydrogen bond network formed by terminal cyano ligands of the [W(CN)(8)](3-) moiety and water molecules. The distance between the adjacent Cu(3)(II)W(2)(V) chains within the layer is 11.12 A along the a axis. The layers are connected by H-bonds of NCN-NDMF-NCN linkages into 3-D supramolecular architecture. The magnetic properties correspond to a dominant ferromagnetic coupling within the Cu(II)(3)W(V)(2) pentamer units (J = +35(4) cm(-1)) and much weaker effective AF interunit coupling which include both intra- and inter-3,2-chain interactions between pentamers (J' = -0.05(1) cm(-1)).