Secondary‐Ion Mass Spectrometry of Genetically Encoded Targets

Secondary ion mass spectrometry (SIMS) is generally used in imaging the isotopic composition of various materials. It is becoming increasingly popular in biology, especially for investigations of cellular metabolism. However, individual proteins are difficult to identify in SIMS, which limits the ability of this technology to study individual compartments or protein complexes. We present a method for specific protein isotopic and fluorescence labeling (SPILL), based on a novel click reaction with isotopic probes. Using this method, we added ¹⁹F‐enriched labels to different proteins, and visualized them by NanoSIMS and fluorescence microscopy. The ¹⁹F signal allowed the precise visualization of the protein of interest, with minimal background, and enabled correlative studies of protein distribution and cellular metabolism or composition. SPILL can be applied to biological systems suitable for click chemistry, which include most cell‐culture systems, as well as small model organisms.     

PEGylated Click Polypeptides Synthesized by Copper‐Free Microwave‐Assisted Thermal Click Polymerization for Selective Endotoxin Removal from Protein Solutions

PEGylated click polypeptides ( PEG‐CP s) containing α‐amino side groups as well as PEG segments are designed for selective endotoxin removal from protein solutions. The PEG‐CP s are synthesized via copper‐free thermal click copolymerization from aspartic (or glutamic) acid‐based dialkyne and diazide monomers (containing free amino side groups) and alkyne‐terminated mPEGs or dialkyne‐terminated PEGs. Microwave‐assisting technology is introduced into thermal click chemistry to improve the reaction efficiency. The monomers and polymers are fully characterized using NMR, XPS, and MALDI‐TOF MS. After immobilizing the PEGylated click polypeptides onto polystyrene microspheres, the adsorbents exhibit good endotoxin removal selectivity from BSA solutions.

     

Biomolecular Assemblies Combining Two Orthogonal Copper‐Mediated Ligations in a One‐Pot Reaction

The access to multifunctional biomolecular compounds involves multistep reactions usually with a complicated protection scheme and lengthy separation processes. The development of a strategy combining several orthogonal ligations is highly desirable. Herein, we introduce a new method that involves two orthogonal copper‐mediated ligations of azide with alkyne, and amine with thioacid. We established compatible conditions to carry out molecular assemblies of three different chemical components in a single one‐pot reaction. The effectiveness of the method was demonstrated in the synthesis of biomolecular compounds that are known to target tumor tissue. The simple reaction conditions suggest that this strategy of combining several orthogonal ligations could have wide potential for the chemical synthesis of complex macromolecules.     

Synthesis of Triazole‐Linked Amino Acid‐Aryl C‐Glycoside Hybrids via Click Chemistry as Novel PTP1B Inhibitors

Triazolyl phenylalanine and tyrosine‐aryl C‐glycoside hybrids were readily synthesized via microwave‐assisted Cu(I)‐catalyzed azide‐alkyne 1,3‐dipolar cycloaddition in high yields. Successive enzymatic assay identified the synthesized glycoconjugates as novel PTP1B inhibitors with low micromole‐ranged inhibitory activity and at least several‐fold selectivity over other homologous PTPs tested. In addition, the benzyl groups on glucosyl moiety were found crucial toward PTP1B inhibition.     

Orchestrating the Biosynthesis of an Unnatural Pyrrolysine Amino Acid for Its Direct Incorporation into Proteins Inside Living Cells

We here report the construction of an E. coli expression system able to manufacture an unnatural amino acid by artificial biosynthesis. This can be orchestrated with incorporation into protein by amber stop codon suppression inside a living cell. In our case an alkyne‐bearing pyrrolysine amino acid was biosynthesized and incorporated site‐specifically allowing orthogonal double protein labeling.     

High‐Density DNA Functionalization by a Combination of Cu‐Catalyzed and Cu‐Free Click Chemistry

We report the regioselective Cu‐free click modification of styrene functionalized DNA with nitrile oxides. A series of modified oligodeoxynucleotides (nine base pairs) was prepared with increasing styrene density. 1,3‐Dipolar cycloaddition with nitrile oxides allows the high density functionalization of the styrene modified DNA directly on the DNA solid support and in solution. This click reaction proceeds smoothly even directly in the DNA synthesizer and gives exclusively 3,5‐disubstituted isoxazolines. Additionally, PCR products (300 and 900 base pairs) were synthesized with a styrene triphosphate and KOD XL polymerase. The click reaction on the highly modified PCR fragments allows functionalization of hundreds of styrene units on these large DNA fragments simultaneously. Even sequential Cu‐free and Cu‐catalyzed click reaction of PCR amplicons containing styrene and alkyne carrying nucleobases was achieved. This new approach towards high‐density functionalization of DNA is simple, modular, and efficient.     

Phosphine‐Free Stille–Migita Chemistry for the Mild and Orthogonal Modification of DNA and RNA

An optimized catalyst system of [Pd₂(dba)₃] and AsPh₃ efficiently catalyzes the Stille reaction between a diverse set of functionalized stannanes and halogenated mono‐, di‐ and oligonucleotides. The methodology allows for the facile conjugation of short and long nucleic acid molecules with moieties that are not compatible with conventional chemical or enzymatic synthesis, among them acid‐, base‐, or fluoride‐labile protecting groups, fluorogenic and synthetically challenging moieties with good to near‐quantitative yields. Notably, even azides can be directly introduced into oligonucleotides and (deoxy)nucleoside triphosphates, thereby giving direct access to “clickable” nucleic acids.     

Coupling‐Reagent‐Free Synthesis of Dipeptides and Tripeptides Using Amino Acid Ionic Liquids

A general method for the synthesis of dipeptides has been developed, which does not require any coupling reagents. This method is based on the reaction of readily available HCl salts of amino acid methyl esters with tetrabutylphosphonium amino acid ionic liquids. The isolation procedure of stepwise treatment with AcOH is easy to carry out. The method was extended to the synthesis of tripeptide, tyrosyl‐glycyl‐glycine, present in IMREG‐1, also.     

Initiator and Photocatalyst‐Free Visible Light Induced One‐Pot Reaction: Concurrent RAFT Polymerization and CuAAC Click Reaction

A new, visible light‐catalyzed, one‐pot and one‐step reaction is successfully employed to design well‐controlled side‐chain functionalized polymers, by the combination of ambient temperature revisible addtion‐fragmentation chain transfer (RAFT) polymerization and click chemistry. Polymerizations are well controlled in a living way under the irradiation of visible light‐emitting diode (LED) light without photocatalyst and initiator, using the trithiocarbonate agent as iniferter (initiator‐transfer agent‐terminator) agent at ambient temperature. Fourier transfer infrared spectroscopy (FT‐IR), NMR, and matrix‐assisted laser desorption/ionization time‐of‐flight mass spectrometry (MALDI‐TOF‐MS) data confirm the successful one‐pot reaction. Compared to the reported zero‐valent metal‐catalyzed one‐pot reaction, the polymerization rate is much faster than that of the click reaction, and the visible light‐catalyzed one‐pot reaction can be freely and easily regulated by turning on and off the light.

     

有机-无机杂化材料负载的钯催化剂: 一种新型有效而可循环的无铜Sonogashira偶联反应

本文报道了有机-无机杂化材料固载的钯催化的无铜Sonogashira偶联反应。在3-[N,N-双（二苯基膦）氨基）]丙基功能化的硅胶固载的钯催化下,末端炔烃和碘代芳烃、溴代芳烃的偶联反应生成高产率相应的偶联产物。反应条件包括使用乙二醇为溶剂,三乙胺为碱。而且硅胶负载的膦钯催化剂和溶剂乙二醇经简单处理,可循环使用6次不降低活性。     

Easy One‐Pot Synthesis of 1‐Monosubstituted Aliphatic 1,2,3‐Triazoles from Aliphatic Halides,Sodium Azide and Propiolic Acid by a Click Cycloaddition/Decarboxylation Process

1‐Monosubstituted aliphatic 1,2,3‐triazoles were synthesized by a one‐pot reaction from aliphatic halides (Cl and Br), sodium azide and propiolic acid. The yields ranged from moderate to good. The reaction was easily carried out in DMF with Cs₂CO₃ at 100°C by copper‐catalyzed click cycloaddition/decarboxylation.     

Solvent‐Resistant Nanofiltration for Product Purification and Catalyst Recovery in Click Chemistry Reactions

The quickly developing field of “click” chemistry would undoubtedly benefit from the availability of an easy and efficient technology for product purification to reduce the potential health risks associated with the presence of copper in the final product. Therefore, solvent‐resistant nanofiltration (SRNF) membranes have been developed to selectively separate “clicked” polymers from the copper catalyst and solvent. By using these solvent‐stable cross‐linked polyimide membranes in diafiltration, up to 98 % of the initially present copper could be removed through the membrane together with the DMF solvent, the polymer product being almost completely retained. This paper also presents the first SRNF application in which the catalyst permeates through the membrane and the reaction product is retained.     

过无溶剂、无催化的aza-Michael加成反应合成b氨基酸衍生物

本文报道一种安全,环境有好,经济实用的合成b氨基酸衍生物的新方法。利用α,β不饱和化合物和脂肪族胺,通过无溶剂、无催化的aza-Michael加成反应,高产率的合成b氨基酸衍生物。     

CuAAC Click Reactions in the Gas Phase: Unveiling the Reactivity of Bis‐Copper Intermediates

Copper‐catalysed azide alkyne cycloaddition (CuAAC) has been considered a breakthrough transformation over the last 15 years. Its debated mechanism arouses continuously growing interest. By means of a mass spectrometer modified ad hoc, the entire catalytic cycle of CuAAC reaction has been investigated in the gas phase. Ion‐molecule reactions were performed inside the mass spectrometer to reproduce step‐by‐step, at a molecular level, the complete catalytic cycle of the click reaction. We successfully challenged the reactivity of elusive mono‐ and bis‐copper intermediates by ion‐molecule reactions leading to the production of mass‐characterized triazole products, paving the way for detailed energetic studies to be performed in the gas phase. The structures of the relevant species, calculated at a DFT level, helped rationalise our experimental results.     

Rapid Hybridization of Chitosan‐Gold‐Antibodies via Metal‐free Click in Water‐based Systems: A Model Approach for Naked‐eye Detectable Antigen Sensors

A surface plasmon resonance (SPR) expression after hybridization of chitosan–gold nanoparticle‐antibody ( CS ‐ AuNPs‐Ab ) based on: i) metal‐free click chemistry, and, ii) in water system as an approach for a rapid antigen sensing, is proposed. The chitosan‐hydroxybenzyl triazole complex enables us to carry out the conjugation of mPEG and trifluoromethylated oxanorbornadiene ( OND ) in water. CS‐mPEG‐OND further allows metal‐free click to hybridize chitosan ( CS ) with azido‐modified gold nanoparticles ( azido‐AuNPs ) in aqueous solution at room temperature. The CS‐mPEG‐OND conjugated with LipL32 antibody ( Ab ) not only effectively binds with LipL32 antigen ( Ag ) but also performs the cycloaddition with azido‐AuNPs to display a change in color within 2 min. The phenomenon leads to a simple and efficient naked‐eye antigen detection technique.