Theoretical Studies on the Reaction Mechanism of Hydroxyl Radical with 1,1,1-Trichloroethane

Ab initio and density functional theory calculations have been carried out to investigate the reaction of hydroxyl radical (OH) and 1,1,1-trichloroethane (CH3CCl3). The potential energy surface has been given according to the relative energies calculated at the MP2/cc-pVTZ level after the spin projection (PMP2). Five reaction channels were identified and the intramolecular hydrogen bonding was observed in some transition state structures. The barrier heights and reaction enthalpies calculated for all possible channels show that the hydrogen abstraction channel is predominant kinetically and thermodynamically. The contribution from other channels was predicted to be minor.     

G型含氟有机磷神经毒剂醇解反应机理研究

含氟有机磷神经毒剂毒性强,危害大,给实验研究带来不便。本文采用B3LYP/6-311G**和MP2/6-311G**方法及一个简化计算模型,探讨了G型含氟有机磷神经毒剂在中性和碱性条件下的醇解反应机理。结果显示,中性环境下G型含氟有机磷神经毒剂的醇解,不管是气相还是液相反应,3个甲醇分子参与的分步路径(Path C)都是最优路径;而1个甲醇阴离子参与的碱性条件下的分步路径(Path A'),其气相和液相反应决速步骤的吉布斯自由能垒分别为14.6和31.4 k J/mol,比Path C分别低87.0和59.8 k J/mol。因此,强碱催化下的G型含氟有机磷神经毒剂的醇解更高效。     

Theoretical Study of Reaction Mechanism of 1-Propenyl Radical with NO

The reaction system of 1-propenyl radical with NO is an ideal model for studying the intermolecular and intramolecular reactions of complex organic free radicals containing C=C double bonds. On the basis of the full optimization of all species with the Gaussian 98 package at the B3LYP/6-311++G** level, the reaction mechanism was elucidated extensively using the vibrational mode analysis. There are seven reaction pathways and five sets of small molecule end products: CH2O+CH3CN, CH2CHCN+H2O, CH3CHO+HCN, CH3CHO+HNC, and CH3CCH+HNO. The channel of C3H5￠+NO→ IM1→TS1→IM2→TS2→IM3→TS3→CH3CHO+HCN is thermodynamically most favorable.     

Quantum Chemical Study on Reaction of Acetaldehyde with Hydroxyl Radical

The reaction of acetaldehyde with hydroxyl radical was studied by means of quantum chemical methods. The geometries for all the stationary points on the potential energy surfaces were optimized fully, respectively, at the G3MP2, G3, and MP2/6-311 G(d,p) levels. Single-point energies of all the species were calculated at the QCISD/6-311 G(d,p) level. The mechanism of the reaction studied was confirmed. The predicted product is acetyl radical that is in agreement with the experiment.     

NCS自由基与NO反应动力学的理论研究

用量子化学密度泛函理论B3LYP/6-31+G^*和高级电子相关校正的偶合簇[CCSD(T)/6-311+G^*]方法,对NCS自由基与NO反应的机理和动力学进行了理论研究,得到了体系的势能面信息和可能的反应机理.计算了反应的热力学参数及反应能垒.采用传统过渡态理论计算了各反应通道的速率常数.研究结果表明,NCS自由基与NO反应中存在4个反应通道,产物分别为OCS+N₂,CS+N₂O,ONS+CN和ONCNS.从能量变化和反应速率两方面考虑,NCS+NOOCS+N₂应为主反应通道.     

(CH3)3C+NO2反应机理的理论研究

用量子化学密度泛函方法,在B3LYP/6-31G*水平下研究了叔丁基自由基(CH3)3C和NO2气体的反应机理.研究表明,该反应是在单、三态势能面上的多通道反应.不同反应通道的产物不同,单态下反应更容易发生.常温下对于一个敞开体系(例如在大气当中),(CH3)3C自由基和NO2作用主要生成比较稳定的化合物(CH3)3CONO和(CH3)3CNO2.这对于消除大气污染起到一定的作用.     

2-糠酸甲酯与羟基反应动力学的理论研究（英文）

糠酸甲酯是随着2,5-呋喃二甲酸二甲酯新合成方法的发展而发展起来的一种新型可再生生物燃料.本文用CCSD (T)/CBS//M062X/cc-pVTZ方法研究了糠酸甲酯与羟基自由基之间的势能面,包括夺氢反应和加成反应.确定了异构化和分解反应生成的初级自由基.结果表明,支链甲基上的夺氢反应是主要的反应通道,呋喃环上的OH加成具有明显的压力依赖性.本文提出的速率系数为糠酸甲酯燃烧机理的改进提供了重要的动力学数据,为进一步研究实际燃料的燃烧过程奠定了良好的基础.     

羟基自由基和鸟嘌呤-胞嘧啶碱基对反应的密度泛函理论研究

为了解决年龄衰老、基因突变和癌症等问题, 理解DNA的氧化损伤机理非常重要. 本文利用密度泛函方法和极化连续介质模型在液相条件下研究了羟基自由基夺取鸟嘌呤-胞嘧啶(GC)碱基对上5 个氢原子的反应机理. 研究结果表明, 所有的脱氢反应路径都是放热过程, 热力学上五个脱氢反应路径形成自由基的稳定性顺序是(H2b-GC)^·>(GC-H4b)^·>(GC-H6)^·>(GC-H5)^·~(H8-GC)^·, 其中H2b反应路径的能量变化最大, 说明该反应平衡时的转化率最高. 动力学上, 相对于反应复合物的局部反应能垒大小顺序是H2b     

鸟嘌呤受羟基自由基损伤反应机理的量子化学研究

用密度泛函理论(DFT)研究羟基自由基与鸟嘌呤分子加成反应的过渡态, 并进行内禀反应坐标(IRC)反应路径解析, 结果表明, 羟基自由基加成到鸟嘌呤碳碳双键上. 利用B3LYP/6-31++G**对反应物、反应物络合物、过渡态以及产物络合物等反应通道上各个能量驻点的能量进行了计算, 得到反应活化能E_a=28.0867 kJ/mol. AIM计算结果显示, 过渡态结构中鸟嘌呤分子碳碳双键结构被削弱, 羟基自由基氧原子与鸟嘌呤分子碳碳双键中的C4原子具有较强的相互作用, 双键中剩余的π电子离域到了环体系中.     

H2CCF自由基与HNCO反应机理的理论研究

采用密度泛函理论的B3LYP方法, 在6-311＋＋G(d,p)基组水平上研究了H₂CCF自由基与HNCO的微观反应机理, 优化了反应过程中的反应物、中间体、过渡态和产物, 为了获得更精确的能量信息, 还在QCISD(T)/6-311＋＋G(d,p)基组水平上计算了各物质的能量．振动分析结果和IRC分析结果证实了中间体和过渡态的真实性, 计算所得的成键临界点电荷密度的变化也确认了反应过程．对于H₂CCF自由基与HNCO反应, 我们找到了六条可行的反应通道, 结果分析表明通道H₂CCF＋HNCO→IM3→TS5→H₂CCFH＋NCO控制步骤活化能最低, 是该反应的主要通道, 在此反应过程中有稳定的氢键复合物IM3生成, 还表现出氢原子迁移的反应特征．     

SiH2自由基与HNCO反应机理的理论研究

采用密度泛函理论B3LYP方法研究了SiH₂自由基与HNCO的反应机理, 并在B3LYP/6-311＋＋G**水平上对反应物、中间体、过渡态进行了全几何参数优化, 通过频率分析和内禀反应坐标(IRC)确定了中间体和过渡态. 为了得到更精确的能量值, 又用QCISD(T)/6-311＋＋G**方法计算了在B3LYP/6-311＋＋G**水平优化后的各个驻点的相对能量. 计算结果表明SiH₂自由基与HNCO的反应有五条反应通道, 其中顺式反应通道SiH₂＋HNCO→IM3→ TS4→IM5→TS5→IM6→SiH₂NH＋CO反应能垒最低, 为主反应通道.     

OH与TCE和PCE加成中间体消除反应的机理

用从头计算法在UHF/6-31G水平研究了羟基自由基与三氯乙烯和四氯乙烯形成的加成中间体的消除反应,通过振动分析确认了过渡态,计算了内禀反应坐标(IRC).研究表明,该反应消除一个氯化氢分子,形成具有平面构型的另一个中间体,反应活化势垒较低,分别为79.84kJ mol-1和62.68kJ mol-1,且二者反应在常温常压下是熵增、放热、吉布斯自由能ΔGΘ<Ο,具有较大自发趋势的过程。     

CH2F自由基与HNCO反应机理的理论研究

The reaction mechanism of CH2F radical with HNCO was investigated by density functional theory (DFT)at the B3LYP/6-311++G(d,p) level. The geometries of the reactants, the intermediates, the transition states and the products were optimized. The transition states were verified through the vibration analysis.The relative energies were calculated at the QCISD(T)/6-311++G**//B3LYP/6-311++G(d,p) level. Seven feasible reaction pathways of the reaction were studied. The results indicate that the pathway (5) is the most favorable to occur, so it is the main pathway of the reaction.     

乙烯基自由基(C2H·3)与羟基自由基(OH·)反应势能面的理论研究

在QCISD（T）/6-311G（2df,p)//B3LYP/6-311G（d,p)水平上对自由基反应C2H3^. OH^.进行了计算，结果表明，经过缔合、多步H转移、CH3转移和离解等复杂过程，最终要得到8种产物（P1-P8），茯中产物P2（H2CCO H2）和P6（CH3CO^. H^.）是主要产物。本文得到的CH2CHOH（1或1‘），CH3CHO（2）和CH3COH（3）之间的过渡态TS1/2，TS1‘/3和TS2/3的能量顺序与Wesdemiotis等的实验推测相反，而与Smith等的计算结果一致。     

NCO自由基与O和N反应的理论研究

采用密度泛函和量子化学从头算方法, 对NCO自由基和O, N原子反应的势能面进行了理论研究, 讨论了主要的反应通道. 这两种自由基反应的机理比较类似, 初始都有两种进攻方式. NCO与O的主反应通道是O原子从N端无势垒加合, 经过一低垒过渡态, 得到稳定产物P1(CO+NO), 而对NCO与N反应得到了一完整反应通道和无垒加合产物.     

Criegee中间体CH_3CHOO与OH自由基反应机理的理论研究

采用CCSD(T)//B3LYP/6-311+G(d,p)方法研究了Criegee中间体CH_3CHOO与OH自由基反应的微观机理.结果表明,上述反应存在抽氢、加成-分解和氧化3类反应通道,其中,syn-CH3CHOO+OH以抽β-H为优势通道,表观活化能为-4.88 k J/mol;anti-CH_3CHOO+OH则以加成-分解反应为优势通道,表观活化能为-13.25 k J/mol.在加成-分解和氧化反应通道中,anti-构象的能垒均低于syn-构象,而抽氢反应则是syn-(β-H)的能垒低于anti-构象.速率常数计算表明,anti-构象的加成-分解反应通道具有显著的负温度效应;syn-和anti-构象的氧化通道具有显著的正温度效应.3类反应具有显著不同的温度效应,说明通过改变温度可显著调节3类反应的相对速率.     

烯酮及取代烯酮与环戊二烯环加成反应机理的理论研究

利用半经验分子轨道理论AM1方法,研究了烯酮及取代烯酮与环戊二烯环加成反应机理。采用Berny梯度法优化得到各反应的过渡态和中间体,并进行了振动分析确认。计算结果表明,该环加成反应是按照协同的非同步途径进行的,经过一个四元环发生扭曲的过渡态,并有部分电荷从环戊二烯迁移到烯酮或取代烯酮上,前线轨道分析表明反应机理为“2×[1+1]”机理;而氯甲基取代的烯酮与环戊二烯的环加成反应是按照分步途径发生的。计算结果可以很好地说明实验所观察到的立体选择性,并根据烯酮上取代基的电子效应和位阻效应对反应机理的影响进行了分析。     

Theoretical Study on the Reaction Mechanism of Ketene CH2CO with Isocyanate NCO Radical

The bimolecular single collision reaction potential energy surface of an isocyanate NCO radical with a ketene CH2CO molecule was investigated by means of B3LYP and QCISD（T） methods. The computed results indicate that two possible reaction channels exist on the surface. One is an addition-elimination reaction process, in which the CH2CO molecule is attacked by the nitrogen atom at its methylene carbon atom to lead to the formation of the intermediate OCNCH2CO followed by a C-C rupture channel to the products CH2NCO＋CO. The other is a direct hydrogen abstraction channel from CHzCO by the NCO radical to afford the products HCCO＋HNCO. Because of a higher barrier in the hydrogen abstraction reaction than in the addition-elimination reaction, the direct hydrogen abstraction pathway can only be considered as a secondary reaction channel in the reaction kinetics of NCO＋ CH2CO. The predicted results are in good agreement with previous experimental and theoretical investigations.     

Theoretical Investigation on Mechanism,Thermochemistry, and Kinetics of the Gas-phase Reaction of 2-Propargyl Radical with Formaldehyde

Gas-phase mechanism and kinetics of the reactions of the 2-propargyl radical(H2CCCH), an important intermediate in combustion processes, with formaldehyde were investigated using ab initio molecular orbital theory at the coupled-cluster CCSD(T)//B3LYP/6-311++G(3df,2p) method in conjunction with transition state theory(TST), variational transition state theory(VTST) and Rice-Ramsperger-Kassel-Marcus(RRKM) calculations for rate constants. The potential energy surface(PES) constructed shows that the H2CCCH+HCHO reaction has six main entrances, including two H-abstraction and four additional channels, in which the former is energetically more favorable. The H-abstraction channels slide down to two quite weak pre-complexes COM-01(-9.3 kJ/mol) and COM-02(-kJ/mol) before going via energy barriers of 71.3(T0/P1) and 63.9 kJ/mol(T0/P2), respectively. Two post-complexes, COM-1(-17.8 kJ/mol) and COM-2(-23.4 kJ/mol) created just after coming out from T0/P1 and T0/P2, respectively, can easily be decomposed via barrier-less processes yielding H2CCCH2+CHO(P1,-12.4 kJ/mol) and HCCCH3+CHO(P2,-16.5 kJ/mol), respectively. The additional channels occur initially by formation of four intermediate states, H2CCCHCH2O(I1, 1.1 kJ/mol), HCCCH2CH2O(I3, 4.5 kJ/mol), H2CCCHOCH2(I4, 10.2 kJ/mol), and HCCCH2OCH2(I6, 19.1 kJ/mol) via energy barriers of 66.3, 59.2, 112.2, and 98.6 kJ/mol at T0/1, T0/3, TOM, and TO/6, respectively. Of which two channels producing 14 and 16 can be ignored due to coming over tlie high barriers TOM and TO/6, respectively. The rate constants and product branching ratios for the low-energy channels calculated show that the H2CCCH+HCHO reaction is almost pressure-independent. Altliough the H2CCCH+HCHO→Ⅰ1 and H2CCCH+HCHO→Ⅰ3 channels become dominant at low temperature, however, they are less competitive channels at high temperature.     

Theoretical Studies on Reaction Mechanism of CH3SO with NO

The potential energy surface （PES） of CH3SO radical with NO reaction has been studied at MP2/6-311G（2df, p） and QCISD/6-311G（2df, p） levels. Geometries of the reactants, transition states （TS） and products were optimized at B3LYP/6-311G （d,p） level. The geometries of the transition states were found for the first time. The calculated results show that the reaction can proceed via singlet-state or triplet-state PES. Because of the high energy barrier of triplet surface, the singlet surface reactions are dominant. The topological analysis of electron density shows that there are two kinds of structaral transition states （the bifurcation-type ring structure transition state and the T-shaped conflict structure transition state） in the titled reaction. The total electronic density of the reactants, TS and products and the spin electronic density on the triplet surface were also discussed in this paper.