A 1:1:2 complex between 1,4,8,11-tetraazacyclotetradecane (cyclam), anthraflavic acid, and water

A 1:1:2 complex of 1,4,8,11-tetraazacyclotetradecane (cyclam), anthraflavic acid, and water has been obtained and characterized by X-ray diffraction. C₂₄H₃₆N₄O₆, monoclinic, P2₁/c, a = 11.966(1) Å, b = 11.570(1) Å, c = 9.604(1) Å, = 107.16(1)°,V = 1270.5(2) ų, Z = 2. Two of the four N atoms of the macrocyclic ring are protonated, and the corresponding anthraflavic acid exists as a dianion. The following types of H-bonding have been found in this complex: (1) between protonated NH groups of the macrocycle and O atoms of the ionized anthraflavic hydroxyls; (2) between protonated and nonprotonated NH groups of the macrocycle; (3) between the water molecules and O atoms of the ionized anthraflavic hydroxyls. The above interactions give rise to the formation of a 2D-supramolecular network in the cyclam complex; however, the major difference from the azamacrocyclic anthraflavates studied previously is that there is no direct interaction between the anthraflavic anions.Deceased     

A 1:2:2 complex between 1,4,10,13-tetraoxa-7,16-diazacyclooctadecane (4,13-diaza-18-crown-6), 2,6-dihydroxyanthraquinone and water

A 1:2:2 complex of diaza crown ether 1,4,10,13-tetraoxa-7,16-diazacyclooctadecane, anthraflavic acid (2,6-dihydroxyanthraquinone) and water has been synthesized. The crystal is triclinic, P1, with a = 7.705(2), b = 10.871(2), c = 11.540(2) Å, = 100.40(2), = 91.38(2), = 98.01(2)°, Z = 1, and D_calc = 1.375 mg m^–3. The main feature of the crystal structure is the formation of a supramolecular sheet by hydrogen bonding of the anthraflavic monoanions, not only head-to-tail through the hydroxyl oxygens, but sideways through the quinone oxygens. This complex represents an intermediate case between total transfer of protons of a hydroxy-guest to crown N-atoms, and no transfer.     

Synthesis, characterization, and crystal structure of an iron(II) 5,5,7,12,12,14-hexamethyl-1,4,8,11-tetraazacyclotetradecane macrocyclic complex

The synthesis and detailed characterization of the macrocyclic complex [Fe(meso)(CH₃CN)₂](ClO₄)₂·2CH₃CN (meso: 5,5,7,12,12,14-hexamethyl-1,4,8,11-tetraazacyclotetradecane) based on analytical, spectrometric, spectroscopic and X-ray diffraction methods are reported herein. This is the first single crystal structure of an iron-meso complex ever reported in the literature. The molecular structure revealed a tetragonally distorted octahedral geometry with the iron(II) bound to four amine nitrogens in the equatorial plane, while the apical positions are occupied by acetonitrile molecules. The macrocycle adopts the most stable conformation with the six-membered rings in chair form, while the gauche conformation is seen for the five-membered rings. The compound crystallizes in the space group P2₁/n, with cell parameters a=10.139(1), b=12.237(1), c=13.311(1) ?, β=99.542(2)° and Z=2.Supplementary material CCDC-239983 contains the supplementary crystallographic data for this paper. These data can be obtained free of charge at [or from the Cambridge Crystallographic Data Centre (CCDC), 12 Union Road, Cambridge CB2 1EZ, UK; fax: +44(0)1223–336033; email: deposit@ccdc.cam.ac.uk].”     

Crystal and molecular structure of the triflate salt of diprotonated 1,4,8,11-tetrakis(2-hydroxyethyl)-1,4,8,11-tetraazacyclotetradecane, [C10H22N4(CH2CH2OH)4 2+]−[CF3SO3 −]2: geometry of a diprotonated octadenate ligand

The title complex crystallizes in the centrosymmetric monoclinic space group P2₁/n with Z=2. The cation is the diprotonated derivative of the neutral octadentate macrocyclic ligand C₁₀H₂₀N₄(CH₂CH₂OH)₄; the two protonated nitrogen atoms are as far apart as is possible in the 14-membered ring (1-and 8-positions) so as to minimize electrostatic repulsions. Each of the [C₁₀H₂₂N₄(CH₂CH₂OH)₄ ²⁺] cations is involved in hydrogen bonding (through the four hydroxy groups) to oxygen atoms on four different peripheral [CF₃SO₃ ⁻] anions.     

Structure and spectroscopic properties of the solid complex of 2-ethylpyridine with 2,6-dichloro-4-nitrophenol

The structure of the complex of 2-ethylpyridine with 2,6-dichloro-4-nitrophenol has been determined by X-ray diffraction. The crystals are monoclinic, space group P2₁/c,a=11.134(2),b=7.558(1),c=17.586(2) Å, =104.94(2)° andZ=4. The N⁺-H...O^– bridge of 2.613(2) Å with 相似文献   

The crystal structure of a bis(2,6-pyridinedicarboxylato)chromate(III) anion with an elaborate network of hydrogen bonding and π stacking

The synthesis, X-ray crystallography, spectroscopic, and electrochemical properties of the title compound, [Hdpa][Cr(dipic)₂]·3H₂O, 1, are reported. Compound 1 crystallized in the triclinic space group P-1 with a = 7.1057(11) ?, b = 12.965(2) ?, c = 14.269(2) ?, α = 80.306(3)°, β = 82.101(2)°, γ = 83.799(2)°, and V = 1278.6(4) ?³ with Z = 2. The distorted octahedral chromium anions are part of an elaborate network of hydrogen bonding formed by the waters of solvation, the anion, and cation as well as π-stacking interactions.     

Crystal and Molecular Structure of the 1:2 Salt Formed Between 1,2-(4-Pyridyl)Ethane and 2-(4-Hydroxyphenylazo)Benzoic Acid

Abstract  Proton transfer occurred during co-crystallization of 1,2-(4-pyridyl)ethane with 2-(4-hydroxyphenylazo)benzoic acid to yield a salt comprising a 1:2 ratio of 1,2-bis(4-pyridinium)ethane dications and 2-(4-hydroxyphenylazo)benzoate anions. Centrosymmetrically related anions associate by charge-assisted O–H···O hydrogen bonds to form 24-membered {···OC₃N₂C₄OH}₂ synthons. These are connected into a supramolecular polymer via charge-assisted N–H···O hydrogen bonds involving the 1,2-bis(4-pyridinium)ethane dications. The compound crystallizes in the triclinic space group P−1 with a = 8.517(4) ?, b = 9.110(5) ?, c = 10.477(5) ?, α = 96.850(13)°, β = 94.446(12)°, γ = 104.946(10)° and Z = 1 {two anions and a dication}. Index Abstract  Supramolecular chains mediated by charge-assisted O–H···O and N–H···O hydrogen bonding are found in the salt containing a 1:2 ratio of 1,2-bis(4-pyridinium)ethane dications and 2-(4-hydroxyphenylazo)benzoate anions.      

Crystal structures and supramolecular assembly of 1:2 piperazine with o- and p-nitrophenol

1:2 Cocrystals of piperazine (PPN) with o- and p-nitrophenol (oNPH and pNPH) were obtained from aqueous solution. The co-crystal structure of PPN, 2pNPH, and 2H₂O is triclinic space group : a = 6.401(1) Å, b = 6.7515(1) Å, c = 11.219(1) Å, = 100.37(1)°, = 97.10(1)°, = 99.99(1)°,V= 465.5(1) ų, Z = 2. Refinement led to a final conventional R value of 0.0365 for 2081 reflections. PPN, 2oNPH, and 2H₂O cocrystallize in the monoclinic space group P2₁ : a = 7.753(1) Å, b = 10.888(2) Å, c = 11.378(2) Å, = 92.89(1)°, V = 953.1(3) ų, Z = 2. Refinement led to a final conventional R value of 0.0347 for 1978 reflections. It was found in both cocrystals that the hydroxyl H-atom of pNPH and oNPH was transferred to a N-atom of PPN, forming new ionic complexes PPNH₂ ²⁺2(oNP^–) and PPNH₂ ²⁺2(pNP^–), respectively.     

Catenated molecular pattern in the crystal structure of a copper(II) complex with pyrazine-2,6-dicarboxylic acid and chloride ligands

The crystals of catena-dichloro-(dihydrogen pyrazine-2,6-dicarboxylato-O,O′,N,-N′) copper(II) dihydrate Cu[H₂(2,6-PZDC)]Cl₂?2H₂O are monclinic, space group C2/c with a = 11.658(2) Å, b = 6.778(1) Å, c = 16.390(3) Å, β = 98.90(3)^°, and Z = 4. Two adjacent copper(II) ions are bridged by a fully protonated pyrazine-2,6-dicarboxylic acid molecule which uses for bridging its O,O′,N-bonding moiety on one side and a single hetero-ring nitrogen atom on the other. Two chloride ions in axial position complete the octahedral coordination around the metal ions with bond distances: Cu–N 2.027(3) ÅA, Cu–N′ 2.005(3) ÅA, Cu–Cl. 2.281(1) ÅA, and Cu–O 2.446(2) ÅA. Copper(II) ions are located in the center of symmetry and are coplanar with the ligand acid molecule forming flat molecular chains propagating in the direction of the b axis. Hydrogen bonds via solvation water molecule link the chains into molecular layers parallel to the ac plane. Weak van der Waals type interactions operate between the layers.     

Reaction of 1,2-bis(2,6-dicarboxypyridin-4-yl)ethyne and imidazole with Cu(II) generates a discrete complex not a coordination polymer: crystal structure of [μ-4,4′-(1,2-ethynediyl)-bis(pyridine-2,6-dicarboxylato)-N,O, O′-μ-N′, O′′, O′′′]-diaqua-bis(imidazole)-dicopper(II)

Reaction of 1,2-bis(2,6-dicarboxypyridin-4-yl)ethyne and imidazole with Cu(II) produces crystals containing a discrete complex of [μ-4,4′-(1,2-ethynediyl)-bis(pyridine-2,6-dicarboxylato)-N, O, O′-μ-N′, O′′, O′′′]-diaqua-bis(imidazole)-dicopper(II) complex (1), [(C₁₆H₄N₂O₈)(C₃H₄N₂)₂(H₂O)₂Cu₂] instead of a linear coordination polymer. The complex crystallizes in the monoclinic space group P2₁/n with a = 5.3763(8) ?, b = 18.522(3) ?, c = 11.4827(7) ?, β = 93.705(3) ° and Z = 2. The complex sits on a center of symmetry such that the two halves of the molecule are related by inversion symmetry. The molecules pack in layers in which the molecules are joined by intermolecular N–H⋯O hydrogen bonds between imidazole and carboxylate groups and O–H⋯O hydrogen bonds between carboxylate groups and water.     

Crystal structure of 1:1 complex of 3,5-dinitrobenzoic acid and 4-methylpyridine

In the title complex, C₁₃H₁₁N₃O₆, it is observed that the very strong NHO [NsO 2.525(2) Å] holds the molecules of 3,5-dinitrobenzoic acid and 4-methylpyridine together, and that the hydrogen atom is centered between the hydrogen donor and acceptor in that hydrogen bond. The heterocyclic moiety appears as an intermediate between pyridine and pyridinium, while the benzoic acid between carboxylate and carboxylic group. The title complex is further stabilized by CHO hydrogen bonds and – interaction.     

Synthesis,characterization and X‐ray crystal structure of guanidinuim (pyridine‐2,6‐dicarboxylato)(pyridine‐2,6‐monocarboxylato) zincate(II) mono pyridine‐2,6‐dicarboxylic acid tetrahydrate

A new complex of Zinc(II) and guanidinium pyridine–2,6–dicarboxylate proton transfer compound, (GnH)₂ (pydc), was synthesized and characterized using IR, ¹H NMR and ¹³C NMR spectroscopy and single crystal X–ray diffraction. The chemical formula and space group of the resulting complex is (GnH)[Zn(pydc)(pydcH)] · (pydcH₂) · 4H₂O, P 1 where the final R value is 0.0310 for 13287 reflections collected. The [Zn(pydc)(pydcH)]^– anions and the (GnH)⁺ counter‐cations form a three‐dimensional solid‐state structure by a variety of noncovalent interactions such as ion pairing, hydrogen bonding and π–π stacking which are going to be discussed. (© 2007 WILEY ‐VCH Verlag GmbH & Co. KGaA, Weinheim)     

Synthesis,Characterization and Crystal Structure of Ethyl 2-amino-4-(4-fluorophenyl)-6-phenylcyclohexa-1,3-diene-1-carboxylate

Ethyl 2-amino-4-(4-fluorophenyl)-6-phenylcyclohexa-1,3-diene-1-carboxylate was synthesized from ethyl 6-(4-bromophenyl)-4-(4-fluorophenyl)-2-oxocyclohex-3-ene-1-carboxylate and ammonium acetate in glacial acetic acid. The synthesized compound was characterized by elemental analysis, FT-IR, thermogravimetric analysis (TGA), differential thermal analysis (DTA), UV-Visible, and single-crystal X-ray diffraction. The title compound, ethyl 2-amino-4-(4-fluorophenyl)-6-phenylcyclohexa-1,3-diene-1-carboxylate, C₂₁H₂OFNO₂, crystallizes in the orthorhombic space group Pbca with the following unit-cell parameters: a = 17.417(2), b = 9.7287(9), c = 21.014(2) Å, and Z = 8. The crystal structure was solved by direct methods using single-crystal X-ray diffraction data collected at room temperature and refined by full-matrix least-squares procedures to a final R-value of 0.0644 for 1616 observed reflections. An intramolecular N–H…O hydrogen bond generates an S(6) graph-set motif. In the crystal, molecules are linked by N–H…O hydrogen bonds, forming a two-dimensional network.     

Crystal structures of N1, N5‐dibenzoyltetrahydro‐4‐methyl‐1, 5‐benzodiazepin‐2‐one (DBTBO) and tetrahydro‐4‐methyl‐1, 5‐benzodiazepin‐2‐one (TBO)

Adducing structural analogies between the two fused systems, N1, N5‐Dibenzoyltetrahydro‐4‐methyl‐1,5‐benzodiazepin‐2‐one, C₂₄H₂₀N₂O₃ (DBTBO CCDC 200341) and Tetrahydro‐4‐methyl‐1,5‐benzodiazepin‐2‐one, C₁₀H₁₂ N₂O (TBO CCDC 200342) helps to find the pharmacological differences from the view point of variant hetero atom substitutions in the hetero cycle. Both the diazepines crystallized in identical monoclinic space group P2₁/n with a = 14.1134(1) Å, b = 9.2444(1) Å, c = 16.3812(1) Å; β = 107.11(1)º, V = 2042.7(3) ų for DBTBO and a = 9.3363(7) Å, b = 10.4895(8) Å, c = 9.9852(7) Å, β = 91.314(1)º, V = 977.62(1) ų for TBO, respectively. The two structures were solved by direct methods and refined by full‐matrix least‐squares procedure to final R‐values of R1 = 0.0575(DBTBO) and R1 = 0.0984(TBO). Structural differences include non‐identical boat conformations of these seven‐membered rings and the different non‐bonding interactions in the benzodiazepine pair.     

Crystal and molecular structure of trans‐(±)‐3‐acetoxy‐2‐(4‐methoxyphenyl)‐4‐oxo‐2,3,4,5‐tetrahydro‐1,5‐benzothiazepine‐1‐oxide

The title compound is a structurally related isomer of diltiazem, a well known drug. This compound (C₁₈H₁₇NO₅S) crystallizes in the space group P2₁/n with a = 13.803(4), b = 7.704(3), c = 16.093(3) Å, β = 105.37(2)º, Z = 4, V = 1650.1(9) ų. The least‐squares refinement gave residual index R = 0.067 for 2831 observed reflections. The distorted seven‐membered ring in the molecule shows twist‐boat conformation. Hydrogen bonds in which the amide group at one molecule and a carbonyl group in the adjacent molecule are involved to form centrosymmetric dimers in the crystal. (© 2006 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim)     

Molecular structure and 1H, 13C NMR assignments of 1,3,5-tris(imidazol-1-ylmethyl)-2,4,6-trimethylbenzene

The molecule 1,3,5-tris(imidazol-1-ylmethyl)-2,4,6-trimethylbenzene (titmb) crystallizes as a monohydrate in the monoclinic space group C2/c with a = 20.888(4), b = 13.220(2), c = 14.385(2) Å, = 90.36(1)°. Two of three imidazole groups are on one side of the central benzene ring, and the other one is on the opposite side. The crystal packing of titmb is stabilized by O-H--N hydrogen bonding between the water molecule and nitrogen atoms of the imidazole group. The complete ¹H and ¹³C NMR assignments for titmb were carried out by 2D NMR spectral measurements.     

Structures of anti,Z-4,4-dimethyl-3-thiosemicarbazide, syn,E,Z-2,4-dimethyl-3-thiosemicarbazide and syn,E-1-cyclopentano-3-thiosemicarbazone

The structures of three alkyl derivatives of thiosemicarbazide are described: anti,Z-4,4-dimethyl-3-thiosemicarbazide (1), syn,E,Z-2,4-dimethyl-3-thiosemicarbazide (2), and syn,E-1-cyclopentano-3-thiosemicarbazone (3). Crystal data: for 1: triclinic, P-1 (#2), a = 5.802(1)Å, b = 6.935(1)Å, c = 8.104(2)Å, = 78.35(1)°, = 82.13(1)°, = 70.71(1)°, and Z = 2; for 2: orthorhombic, Pbca (#61), a = 9.417(3)Å, b = 8.624(2)Å, c = 15.169(3)Å, and Z = 8; for 3: triclinic, P-1 (#2), a = 6.068(3)Å, b = 8.145(4)Å, c = 8.666(5)Å, = 83.75(4)°, = 86.16(5)°, = 74.07(4)°, and Z = 2. In general, molecules are linked by N–H···S hydrogen bonds with sulfurs accepting two or three hydrogen bonds. Structures 2 and 3, which adopt the syn conformation, form N–H···N intramolecular hydrogen bonds. The solid-state structures are consistent with their infrared and proton nuclear magnetic resonance spectra.     

Crystal and molecular structure of di(1-pyrazolyl)methane,CH2(C3N2H3)2

The title compound consists of two planar pyrazolyl fragments oriented at 73.0° to each other and linked to a common carbon atom. All hydrogen atoms were located unambiguously and their positions were refined.     

Thermal and phase behaviour studies of hydrogen-bonded compounds (SA:nOBA) using POM,DSC and image-processing techniques

A novel series of hydrogen-bonded liquid crystals are synthesised. The hydrogen bond is formed between non-mesogenic salicylic acid and the mesogenic p-n-alkoxy benzoic acids with n = 4–8, 10–12 and 16. The formation of hydrogen bond is confirmed from infrared studies. The transition temperatures and the phase identification are made with the use of polarising microscope (POM) attached with a hot stage. Further, the heats of transition and enthalpies are obtained by employing the differential scanning calorimeter (DSC). Along with POM and DSC, textural image analysis is done by image-processing techniques using MATLAB software and transition temperatures are identified. The results reveal that the compounds with the chain number n = 7, 8, 10–12 show the manifestation of smectic-B phase by quenching smectic-C phase.     

Crystal Structures of D-N-(2-Adamantyl)phenylglycinol and L-N-(2-Adamantyl)diphenylphenylalinol: Chiral Amino Alcohols Utilized as Ligands for Catalytic Asymmetric Hydroamination

Amino alcohols are important ligands for the asymmetric catalytic hydroamination of aminoallenes to form chiral pyrrolidines. Herein, we report the crystal structures of two chiral amino alcohols, D-N-(2-Adamantyl)phenylglycinol and L-N-(2-Adamantyl)diphenylphenylalinol, that function as ligands within transition metal complexes that catalyze the hydroamination of aminoallenes. Both molecules crystallize in the noncentrosymmetric orthorhombic space group P2₁2₁2₁. Inter- and intramolecular hydrogen bonding plays an important role in stabilizing each alcohol in the solid state in the absence of a transition metal. The presence of these hydrogen bonds has been verified by single crystal X-ray diffraction and their overall strength determined by computational methods.