HSQC-1,n-ADEQUATE: a new approach to long-range 13C-13C correlation by covariance processing

Long-range, two-dimensional heteronuclear shift correlation NMR methods play a pivotal role in the assembly of novel molecular structures. The well-established GHMBC method is a high-sensitivity mainstay technique, affording connectivity information via (n)J(CH) coupling pathways. Unfortunately, there is no simple way of determining the value of n and hence no way of differentiating two-bond from three- and occasionally four-bond correlations. Three-bond correlations, however, generally predominate. Recent work has shown that the unsymmetrical indirect covariance or generalized indirect covariance processing of multiplicity edited GHSQC and 1,1-ADEQUATE spectra provides high-sensitivity access to a (13)C-(13) C connectivity map in the form of an HSQC-1,1-ADEQUATE spectrum. Covariance processing of these data allows the 1,1-ADEQUATE connectivity information to be exploited with the inherent sensitivity of the GHSQC spectrum rather than the intrinsically lower sensitivity of the 1,1-ADEQUATE spectrum itself. Data acquisition times and/or sample size can be substantially reduced when covariance processing is to be employed. In an extension of that work, 1,n-ADEQUATE spectra can likewise be subjected to covariance processing to afford high-sensitivity access to the equivalent of (4)J(CH) GHMBC connectivity information. The method is illustrated using strychnine as a model compound.     

1JCC‐edited HSQC‐1,n‐ADEQUATE: a new paradigm for simultaneous direct and long‐range carbon–carbon correlation

Establishing the carbon skeleton of a molecule greatly facilitates the process of structure elucidation, leaving only heteroatoms to be inserted, heterocyclic rings to be closed, and stereochemical features to be defined. INADEQUATE, and more recently PANACEA, have been the only means of coming close to the goal of totally defining the carbon skeleton of a molecule. Unfortunately, the extremely low sensitivity and prodigious sample requirements of these experiments and the multiple receiver requirement for the latter experiment have severely restricted the usage of these experiments. Proton‐detected ADEQUATE experiments, in contrast, have considerably higher sensitivity and more modest sample requirements. By combining experiments such as 1,1‐ADEQUATE and 1,n‐ADEQUATE with higher sensitivity experiments such as GHSQC through covariance processing, sample requirements can be further reduced with a commensurate improvement in the s/n ratio and F₁ resolution of the covariance processed spectrum. We now wish to report the covariance processing of an inverted ¹J_CC 1,n‐ADEQUATE experiment with a non‐edited GHSQC spectrum to afford a spectrum that can trace the carbon skeleton of a molecule with the exception of correlations between quaternary carbons. Copyright © 2012 John Wiley & Sons, Ltd.     

HMBC‐1,n‐ADEQUATE spectra calculated from HMBC and 1,n‐ADEQUATE spectra

Unsymmetrical and generalized indirect covariance processing methods provide a means of mathematically combining pairs of 2D NMR spectra that share a common frequency domain to facilitate the extraction of correlation information. Previous reports have focused on the combination of HSQC spectra with 1,1‐, 1,n‐, and inverted ¹J_CC 1,n‐ADEQUATE spectra to afford carbon–carbon correlation spectra that allow the extraction of direct (¹J_CC), long‐range (ⁿJ_CC, where n ≥ 2), and ¹J_CC‐edited long‐range correlation data, respectively. Covariance processing of HMBC and 1,1‐ADEQUATE spectra has also recently been reported, allowing convenient, high‐sensitivity access to ⁿJ_CC correlation data equivalent to the much lower sensitivity n,1‐ADEQUATE experiment. Furthermore, HMBC‐1,1‐ADEQUATE correlations are observed in the F₁ frequency domain at the intrinsic chemical shift of the ¹³C resonance in question rather than at the double‐quantum frequency of the pair of correlated carbons, as visualized by the n,1, and m,n‐ADEQUATE experiments, greatly simplifying data interpretation. In an extension of previous work, the covariance processing of HMBC and 1,n‐ADEQUATE spectra is now reported. The resulting HMBC‐1,n‐ADEQUATE spectrum affords long‐range carbon–carbon correlation data equivalent to the very low sensitivity m,n‐ADEQUATE experiment. In addition to the significantly higher sensitivity of the covariance calculated spectrum, correlations in the HMBC‐1,n‐ADEQUATE spectrum are again detected at the intrinsic ¹³C chemical shifts of the correlated carbons rather than at the double‐quantum frequency of the pair of correlated carbons. HMBC‐1,n‐ADEQUATE spectra can provide correlations ranging from diagonal (⁰J_CC or diagonal correlations) to ⁴J_CC under normal circumstances to as much as ⁶J_CC in rare instances. The experiment affords the potential means of establishing the structures of severely proton‐deficient molecules. Copyright © 2013 John Wiley & Sons, Ltd.     

HSQC-ADEQUATE: an investigation of data requirements

Utilizing ¹³C‐¹³C connectivity networks for the assembly of carbon skeletons from HSQC‐ADEQUATE spectra was recently reported. HSQC‐ADEQUATE data retain the resonance multiplicity information of the multiplicity‐edited GHSQC spectrum and afford a significant improvement in the signal‐to‐noise (s/n) ratio relative to the 1,1‐ADEQUATE data used in the calculation of the HSQC‐ADEQUATE spectrum by unsymmetrical indirect covariance (UIC) processing methods. The initial investigation into the computation of HSQC‐ADEQUATE correlation plots utilized overnight acquisition of the 1,1‐ADEQUATE data used for the calculation. In this communication, we report the results of an investigation of the reduction in acquisition time for the 1,1‐ADEQUATE data to take advantage of the s/n gain during the UIC processing to afford the final HSQC‐ADEQUATE correlation plot. Data acquisition times for the 1,1‐ADEQUATE spectrum can be reduced to as little as a few hours, while retaining excellent s/n ratios and all responses contained in spectra computed from overnight data acquisitions. Concatenation of multiplicity‐edited GHSQC and 1,1‐ADEQUATE data also allows the interrogation of submilligram samples with 1,1‐ADEQUATE data when using spectrometers equipped with 1.7‐mm Micro CryoProbes ?. Copyright © 2011 John Wiley & Sons, Ltd.     

HMBC‐1,1‐ADEQUATE via generalized indirect covariance: a high sensitivity alternative to n,1‐ADEQUATE

1,1‐ADEQUATE and the related long‐range 1,n‐ and n,1‐ADEQUATE variants were developed to provide an unequivocal means of establishing ²J_CH and the equivalent of ⁿJ_CH correlations where n = 3,4. Whereas the 1,1‐ and 1,n‐ADEQUATE experiments have two simultaneous evolution periods that refocus the chemical shift and afford net single quantum evolution for the carbon spins, the n,1‐variant has a single evolution period that leaves the carbon spin to be observed at the double quantum frequency. The n,1‐ADEQUATE experiment begins with an HMBC‐type ⁿJ_CH magnetization transfer, which leads to inherently lower sensitivity than the 1,1‐ and 1,n‐ADEQUATE experiments that begin with a ¹J_CH transfer. These attributes, in tandem, serve to render the n,1‐ADEQUATE experiment less generally applicable and more difficult to interpret than the 1,n‐ADEQUATE experiment, which can in principle afford the same structural information. Unsymmetrical and generalized indirect covariance processing methods can complement and enhance the structural information encoded in combinations of experiments e.g. HSQC‐1,1‐ or ?1,n‐ADEQUATE. Another benefit is that covariance processing methods offer the possibility of mathematically combining a higher sensitivity 2D NMR spectrum with for example 1,1‐ or 1,n‐ADEQUATE to improve access to the information content of lower sensitivity congeners. The covariance spectrum also provides a significant enhancement in the F₁ digital resolution. The combination of HMBC and 1,1‐ADEQUATE spectra is shown here using strychnine as a model compound to derive structural information inherent to an n,1‐ADEQUATE spectrum with higher sensitivity and in a more convenient to interpret single quantum presentation. Copyright © 2012 John Wiley & Sons, Ltd.     

Determination of substitution sites in monosubstituted five-membered aromatic heterocycles

Similar magnitudes of proton-proton couplings across three, four, and five bonds and proton-carbon couplings across two and three bonds combined with difficult to predict substituent effects make the results of an indiscriminate use of routine (COSY, HSQC, HMBC, etc.) techniques for substitution site determination in C-monosubstituted five-membered heteroaromatics suspect. As demonstrated on two examples of natural products, the use of 1,1-ADEQUATE leads to unambiguous substitution site determination lending thus further support to suggested inclusion of 1,1-ADEQUATE data into computer-assisted structure elucidation (CASE) protocols.     

Inversion of 1JCC correlations in 1,n‐ADEQUATE spectra

ADEQUATE experiments provide an alternative to the more commonly employed GHMBC experiment for the establishment of long‐range heteronuclear connectivities. The 1,1‐ADEQUATE experiment allows the unequivocal identification of both protonated and non‐protonated carbon resonances adjacent to a protonated carbon. The 1,n‐ADEQUATE experiment establishes correlations via an initial ¹J_CH heteronuclear transfer followed by an ⁿJ_CC out‐and‐back transfer, most typically, via three carbon–carbon bonds. Hence, the 1,n‐ADEQUATE experiment allows the equivalent of ⁴J_CH heteronuclear correlations to be probed when they are not observed in a GHMBC spectrum. Aside from the lower sensitivity of the 1,n‐ADEQUATE experiment relative to GHMBC experiments, the interpretation of the former is also complicated by the ‘leakage’ of ¹J_CC correlations into the spectrum that must be identified. A method for the inversion of ¹J_CC correlations to facilitate the interpretation of 1,n‐ADEQUATE spectra is presented that allows a single experiment to be performed to access ¹J_CC and ⁿJ_CC correlation information. Copyright © 2012 John Wiley & Sons, Ltd.     

Observation of potentially troublesome 2JCC correlations in 1,1‐ADEQUATE spectra

Despite the tremendous usage of HMBC to establish long‐range ¹H–¹³C and ¹H–¹⁵N heteronuclear correlations, an inherent drawback of the experiment is the indeterminate nature of the ⁿJ_XH correlations afforded by the experiment. A priori there is no reliable way of determining whether a given ⁿJ_CH correlation is, for example, via two‐, three‐, or sometimes even four‐bonds. This limitation of the HMBC experiment spurred the development of the ADEQUATE family of NMR experiments that rely on, in the case of 1,1‐ADEQUATE, an out‐and‐back transfer of magnetization via the ¹J_CC homonuclear coupling constant, which is significantly larger than ⁿJ_CC (where n = 2–4) couplings in most cases. Hence, the 1,1‐ADEQUATE experiment has generally been assumed to unequivocally provide the equivalent of ²J_CH correlations. The recent development of the 1,1‐ and 1,n‐HD‐ADEQUATE experiments that can provide homodecoupling for certain ¹J_CC and ⁿJ_CC correlations has increased the sensitivity of the ADEQUATE experiments significantly and can allow acquisition of these data in a fraction of the time required for the original iterations of this pulse sequence. With these gains in sensitivity, however, there occasionally come unanticipated consequences. We have observed that the collapse of proton multiplets, in addition to providing better s/n for the desired ¹J_CC correlations can facilitate the observation of typically weaker ²J_CC correlations across intervening carbonyl resonances in 1,1‐HD‐ADEQUATE spectra. Several examples are shown, with the results supported by the measurement of the ²J_CC coupling constants in question using J‐modulated‐HD‐ADEQUATE and DFT calculations. Copyright © 2016 John Wiley & Sons, Ltd.     

Analysis and elimination of artifacts in indirect covariance NMR spectra via unsymmetrical processing

Indirect covariance NMR offers an alternative method of extracting spin-spin connectivity information via the conversion of an indirect-detection heteronuclear shift-correlation data matrix to a homonuclear data matrix. Using an IDR (inverted direct response)-HSQC-TOCSY spectrum as a starting point for the indirect covariance processing, a spectrum that can be described as a carbon-carbon COSY experiment is obtained. These data are analogous to the autocorrelated 13C-13C double quantum INADEQUATE experiment except that the indirect covariance NMR spectrum establishes carbon-carbon connectivities only between contiguous protonated carbons. Cyclopentafuranone and the complex polynuclear heteroaromatic naphtho[2',1':5,6]-naphtho[2',1':4,5]thieno[2,3-c]quinoline are used as model compounds. The former is a straightforward example because of its well-resolved proton spectrum, while the latter, which has considerable resonance overlap in its congested proton spectrum, gives rise to two types of artifact responses that must be considered when using the indirect covariance NMR method.     

Complete assignments of 1H and 13C NMR spectra of leucanthoside A, a new triterpenoid saponin from Cephalaria leucantha L

Leucanthoside A, a new allose-containing triterpenoid saponin (1), was isolated from the aerial parts of Cephalaria leucantha L. Its structure was determined by electrospray ionization mass spectrometry and NMR spectroscopy. Complete assignments of the 1H and 13C NMR chemical shifts were achieved by two-dimensional NMR experiments: DQF-COSY, NOESY, TOCSY, HSQC, DINE-HSQC, HMBC, 13C-1H 2D-J-resolved spectroscopy, and 1,1-ADEQUATE.     

Observation of untoward 3Jcc correlations in 1,1‐ADEQUATE spectra of pyrimidine analogs: Avoiding potential interpretation pitfalls

Recently, it has been reported that large ⁿJ_CC correlations can sometimes be observed in 1,1‐ADEQUATE spectra with significant intensity, which opens the possibility of structural misassignment. In this work, we have focused on pyrimidine‐based compounds, which exhibit multiple bond correlations in the 1,1‐ADEQUATE experiment as a consequence of ³J_CC coupling constants greater than 10 Hz. Results are supported by both the experimental measurement of ³J_CC coupling constants in question using J‐modulated‐ADEQUATE and density functional theory calculations.     

Additional pitfalls of using 1,1‐ADEQUATE for structure elucidation

1,1‐ADEQUATE is a powerful and robust NMR experiment to establish carbon–carbon connectivities using modest sample quantities when cryogenic probe technology is available. Yet potential pitfalls of applying this method are not widely appreciated, such as weak or missing ¹J_CC correlations in strongly coupled ¹³C‐¹³C AB spin systems and unusually large multi‐bond (ⁿJ_CC) correlations associated with particular functional groups. These large ⁿJ_CC correlations observed in 1,1‐ADEQUATE spectra could be mistaken for ¹J_CC correlations. Copyright © 2016 John Wiley & Sons, Ltd.     

HMBC-RELAY: a combined technique for the differentiation of simultaneously detected 2J(C,H) and (n)J(C,H) connectivities

We present a new pulse sequence that detects simultaneously (n)J(C,H) and 2J(C,H) connectivities. The corresponding coherences are created along independent pathways and therefore can be separated into two different subspectra. One spectrum is to show all (n)J(C,H) connectivities and the other is to show exclusively 2J(C,H) connectivities. In contrast to the previously published 2J/(n)J experiment, this sequence detects the 2J(C,H) connectivities via a C,H,H-RELAY pathway leading to an intensification of the 2J(C,H) signals. Strictly, the 2J(C,H) spectrum does not show 2J(C,H) but 3J(H,H) coupling interactions within 13CH(k)-12CH(l) fragments. Therefore, 2J(C,H) signals can appear even if the corresponding 2J(C,H) coupling constant is zero.     

Coniothyrione: anatomy of a structure revision

Coniothyrione is a xanthone‐derived antibiotic reported several years ago by researchers at Merck & Co. Inc. Revision of the position of the chloro substitution was recently proposed on the basis of empirical reinterpretation of the carbon chemical shift data and a hypothetical biosynthetic argument without the acquisition of any new spectral data to support the postulated change in substituent location. The originally published HMBC data lead to an equivocal assignment of the structure and do not provide a solid basis of support for either structure. Neural network ¹³C chemical shift calculations and density functional theory calculations also led to undifferentiated structures. Definitive confirmation of the structure of coniothyrione based on the acquisition and interpretation of 1,1‐ADEQUATE and inverted ¹J_CC 1,n‐ADEQUATE data is now reported. Copyright © 2013 John Wiley & Sons, Ltd.     

Biosynthesis of chaetochromin A, a bis(naphtho-gamma-pyrone), in Chaetomium spp

The biosynthesis of chaetochromin A, a metabolite of Chaetomium gracile, has been studied using [13CH3]methionine, sodium [1-13C]acetate, sodium [1,2-13C2]acetate, sodium [1-13C,2,2,2-2H3]acetate, and sodium [1-13C,1,1-18O2]acetate as precursors. The folding pattern of the polyketide chain in chaetochromin A, biosynthesized from sodium [1,2-13C2]acetate as the precursor, was determined to be the same as that of rubrofusarin by carbon-13 nuclear magnetic resonance (13C-NMR) analysis. By using [13CH3]methionine as a precursor, the source of 2-CH3 was determined. When sodium [1-13C,2,2,2-2H3]acetate was fed, a beta-isotope-shifted peak was observed only for carbon 2. In the 13C-NMR spectra of chaetochromin A and of its hexamethyl ether derived from sodium [1-13C,1,1-18O2]acetate, isotope-shifted peaks were observed for carbons 4, 5, 6, 8 and 10a, but not for carbon 2. These results showed that oxygen 1 originated from the same unit of acetate as carbon 10a.     

稻壳制备多孔炭对肌酐的吸附

研究了具有高比表面积稻壳基多孔炭(简称RHC)对人体内代谢产物肌酐(简称CR)的吸附, 将采用氢氧化钠活化稻壳制备的四种多孔炭和二种商业活性炭对肌酐的吸附进行了对比, 同时考察了盐酸、硝酸和双氧水对多孔炭进行表面处理及其经过高温处理(800 ℃)后对肌酐的吸附. 结果表明稻壳基多孔炭对肌酐的吸附超过商业炭,经过表面处理后多孔炭的吸附能力增强, 无氧化性盐酸处理后的多孔炭对肌酐的吸附量最大, 氧化性最强的硝酸处理后的多孔炭对肌酐的吸附量最小, 双氧水居中, 高温处理后的多孔炭吸附能力有所降低. 实验证实了多孔炭对CR的吸附符合Freundlich方程.     

Dynamic stereochemistry of erigeroside by measurement of 1H-1H and 13C-1H coupling constants

Erigeroside was extracted from Satureja khuzistanica Jamzad (Marzeh Khuzistani in Persian, family of lamiaceae), and (1)H, (13)C, (13)C{(1)H}, (1)H-(1)H COSY, HMQC and J-HMBC were obtained to identify this compound and determine a complete set of J-coupling constants ((1)J(C-H), (2)J(C-H), (3)J(C-H) and (3)J(H-H)) values within the exocyclic hydroxymethyl group (CH(2)OH) and anomeric center. In parallel, density functional theory (DFT) using B3LYP functional and split-valance 6-311++G** basis set has been used to optimized the structures and conformers of erigeroside. In all calculations solvent effects were considered using a polarized continuum (overlapping spheres) model (PCM). The dependencies of (1)J, (2)J and (3)J involving (1)H and (13)C on the C(5')-C(6') (omega), C(6')-O(6') (theta) and C(1')-O(1') (phi) torsion angles in erigeroside were computed using DFT method. Complete hyper surfaces for (1)J(C1',H1'), (2)J(C5',H6'R), (2)J(C5',H6'S), (2)J(C6',H5'), (3)J(C4',H6'R), (3)J(C4',H6'S) and (2)J(H6'R-H5'S) as well as (3)J(H5',H6'R) were obtained and used to derive Karplus equations to correlate these couplings to omega, theta and phi. These calculated J-couplings are in agreement with experimental values. These results confirm the reliability of DFT calculated coupling constants in aqueous solution.     

Molecular modeling of porous carbons using the hybrid reverse Monte Carlo method

We apply a simulation protocol based on the reverse Monte Carlo (RMC) method, which incorporates an energy constraint, to model porous carbons. This method is called hybrid reverse Monte Carlo (HRMC), since it combines the features of the Monte Carlo and reverse Monte Carlo methods. The use of the energy constraint term helps alleviate the problem of the presence of unrealistic features (such as three- and four-membered carbon rings), reported in previous RMC studies of carbons, and also correctly describes the local environment of carbon atoms. The HRMC protocol is used to develop molecular models of saccharose-based porous carbons in which hydrogen atoms are taken into account explicitly in addition to the carbon atoms. We find that the model reproduces the experimental pair correlation function with good accuracy. The local structure differs from that obtained with a previous model (Pikunic, J.; Clinard, C.; Cohaut, N.; Gubbins, K. E.; Guet, J. M.; Pellenq, R. J.-M.; Rannou, I.; Rouzaud, J. N. Langmuir 2003, 19 (20), 8565). We study the local structure by calculating the nearest neighbor distribution, bond angle distribution, and ring statistics.     

Efficient identification of different types of carbons in organic solids by 2D solid-state NMR spectroscopy

An efficient method for identifying different types of carbon groups (CH(3), CH(2), CH, and quaternary carbons) in organic solids is proposed by utilizing the combination of a two-dimensional (2D) (13)C-(1)H polarization inversion spin exchange at magic angle (PISEMA) NMR experiment and numerical simulation results of simple isolated (13)C-(1)H dipolar coupling models. Our results reveal that there is a unique line shape of the (13)C-(1)H dipolar splitting pattern and a corresponding characteristic splitting value for each carbon group, based on which different carbon types can be distinguished unambiguously. In particular, by using this method, the discrimination and assignment of overlapped signals from different types of carbons can be achieved easily. The efficacy of this method is demonstrated on typical solid small molecules, polymers, and biomacromolecules.     

Dinuclear and octanuclear Mn(II) complexes with mu2-C, mu2-N(pyrrolide), and mu-eta1:eta5-(pyrrolide) bridges: a structural and magnetic study

Reaction of the dinuclear [(CH2SiMe3)(mu-CH2SiMe3)Mn(THF)]2 (1) with an equivalent amount of 1,1-dipyrrolylcyclohexane afforded two compounds depending on the solvent employed. Reaction carried out in THF afforded the dinuclear ([1,1-(mu-C4H3N)(C4H3N)C6H10]Mn(THF)2)2.2(THF) (2) while reaction in toluene yielded the octanuclear and cyclic cluster ([1,1-(mu,eta1:eta5-C4H3N)2C6H10]Mn)8.4(toluene) (3). The magnetism in all three cases is dominated by intramolecular antiferromagnetic exchange with strong coupling in 1 (J=-85 cm(-1)), and in 2 (J=-23.2 cm(-1)), whereas substantially weaker coupling through the sigma/pi-bonded dipyrrolide bridges (J=-3.3 cm(-1)) was observed within the cyclic and octameric 3.