Conformationally restricted dipyrromethene boron difluoride (BODIPY) dyes: highly fluorescent, multicolored probes for cellular imaging

Novel fluorescent, conformationally restricted dipyrromethene boron difluoride (BODIPY) dyes have been prepared by introducing a naphthalenyl group at the meso position of the BODIPY core. These BODIPY dyes exhibit increased fluorescence quantum yields compared with dyes that have a meso-position phenyl group with internal rotation. The absorption and emission wavelengths of such conformationally restricted BODIPY dyes can be easily tuned to the near-IR range by derivatization through a condensation reaction with benzaldehyde derivatives. The two-photon absorption properties of these BODIPY dyes were also investigated and the results show that they exhibit increased two-photon excited fluorescence compared to analogue dyes that contain a phenyl group. The one- and two-photon fluorescence imaging of living cells by using selected BODIPY dyes has been successfully demonstrated.     

Real-Time Fluorescence Visualization of Nanoparticle Aggregation and the Polymorph-Transition Process of a Mechanofluorochromic Difluoroboron-β-Diketone Derivative

The use of organic nanomaterials in biomedical and optical devices has been widely studied. The key to improving the performance and stability of these devices is to control the fabrication process, which determines the phase stability and photophysical properties. In this study, fluorescence changes were observed during the reprecipitation process of mechanofluorochromic molecules of dibenzoyl(methanato)boron difluoride. The cyan-emission phase (C-phase) was first identified. The time evolution of the resolved fluorescence spectra revealed that the green-emission phase (G-phase) was formed from the amorphous phase with yellow emission via the C-phase, in addition to the direct formation of the G-phase. Combined with the results of the investigation into the thermal properties, the fluorescence changes clearly indicate a two-step nucleation process and Ostwald's rule of stages for polymorph transition, which enables us to not only provide guidance for controlling the fabrication process but also propose the ripening process for organic nanoparticle formation.     

Reversible luminescence thermochromism of dibenzoyl(methanato)boron difluoride

Reversible luminescence thermochromism of dibenzoyl(methanato)boron difluoride was found. A substantial hypsochromic shift of the luminescence band maximum (60 nm) with a temperature decrease from 300 to 77 K was observed, and the luminescence color changed from green to blue. A considerable decrease (by 0.386 Å) in the unit cell parameters along the c axis was detected by X-ray diffractometry when the temperature of the crystal decreased from 293 to 123 K. Shortening of the distances between the planes of adjacent molecules (stacking factor) weakens the interaction between the dimers and enhances the monomeric and excimeric luminescence. __________ Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 4, pp. 1032–1034, April, 2005.     

Photophysics of a series of efficient fluorescent pH probes for dual-emission-wavelength measurements in aqueous solutions

This paper evaluates the 5-aryl-2-pyridyloxazole backbone to engineer donor-acceptor fluorescent pH probes after one- or two-photon absorption. Parent fluorophores, as well as derivatives that can be used to label biomolecules, can be easily obtained in good yields. These molecules exhibit a large one-photon absorption in the near-UV range, and a strong fluorescence emission that covers the whole visible domain. The 5-aryl-2-pyridyloxazole derivatives also possess significant cross sections for two-photon absorption. Upon pyridine protonation, large shifts were observed in the absorption spectra after one- and two-photon excitation, as well as in the emission spectra. This feature was used to measure the pK(a) of the investigated compounds that range between 2 and 8. In most of the investigated derivatives, the pK(a) increased upon light excitation and protonation exchanges took place during the lifetime of the excited state, as shown by phase-modulation fluorometry analysis. Several 5-aryl-2-pyridyloxazole derivatives are suggested as efficient probes to reliably measure the pH of aqueous solutions by means of ratiometric methods that are dependent on fluorescence emission.     

One- and two-photon absorption of three-coordinate compounds with different centers (B,Al,N) and a 2,2'-dipyridylnitrogen functional group

A series of three-coordinate octupolar compounds with varied centers (boron, aluminum, and nitrogen), which exhibit very large effective two-photon absorption cross sections have been theoretically studied. The ground state geometries and electronic structures are obtained using the density functional theory with the B3LYP functional and 6-31G(d) basis set, and the results are comparable to the available experimental determinations. Based on the correct geometrical and electronic structures, the one- and two-photon absorptions are predicted by the ZINDO-SOS method. Among these compounds, the boron (B) and aluminum (Al) centers act as acceptors, while the nitrogen center acts as donor according to the net charge changes during the excitation. It is found that (i) the compounds with boron and aluminum centers show two large two-photon absorption peaks, while the molecule with nitrogen center show only one two-photon absorption peak; (ii) the cross sections of the molecules with B or Al as centers are larger than that of the molecule with nitrogen as center; furthermore, the two-photon absorption cross section of the molecule with Al center is larger than that of the molecule with B center, from this point of view, our theoretical prediction provides for the experiment a good new candidate with large two-photon absorption cross section for further research; (iii) lengthening the conjugation bridge by inserting a benzene ring on the organoborane compounds (forming the investigated molecule B-2) enhances the two-photon absorption cross section, and keeping good transparency at the same time.     

Two-photon absorption cross section determination for fluorene derivatives: analysis of the methodology and elucidation of the origin of the absorption processes

A comprehensive analysis of the well-known open aperture Z-scan method, using a modified equation for the change in transmittance, is presented and accounts for discrepancies in two-photon absorption (2PA) cross sections between picosecond and femtosecond excitation. This new approach takes into account excited-state absorption and stimulated emission of the molecules studied. The two-photon absorption cross-section spectra of a series of six fluorene-based derivatives, determined using picosecond pulses, over a broad spectral range (500-900 nm), and this approach using a modified fitting procedure in the open aperture Z-scan is reported. We demonstrate that the fluorene derivatives exhibit two-photon absorption cross-section values between 700 and 5000 GM, when excited into the two-photon allowed electronic state. Excitation anisotropy spectra, measured to investigate the nature of the observed linear and nonlinear absorption bands, are presented and provide insight into the 2PA process.     

Structures and biological activity of cinnamoyl derivatives of coumarins and dehydroacetic acid and their boron difluoride complexes

Computer-assisted screening for Kohonen self-organizing maps in terms of the quantitative structure??activity relationship (QSAR) model revealed the high potential activity of cinnamoyl derivatives of coumarin and dehydroacetic acid and their boron difluoride complexes against a number of biological targets, including HIV-1 integrase. The pronounced inhibitory properties of dehydroacetic acid derivatives and their boron difluoride complexes against HIV-1 integrase were experimentally confirmed by in vitro testing of their antiviral activity with respect to HIV-infected cells. The data obtained suggests a correlation between the structure of the compounds studied and their biological activity.     

Quantum chemical investigation on one- and two-photon absorption properties for a series of donor-π-acceptor-type compounds with trivalent boron as an acceptor

In this paper, one- and two-photon absorption properties as well as the transition nature of a series of donor-π-acceptor-type compounds with trivalent boron as an acceptor have been theoretically studied by using INDO/SDCI method. Our calculations indicate that the four o-methyl moieties on the two mesityl groups play an important part in protecting the trivalent boron from being attacked by oxygen in the air. The trivalent boron containing group can be an all-right electron-acceptor with some bulky groups attached to it. On the basis of geometry optimization and UV–vis spectra, the positions and strengths of two-photon absorption for these molecules were reported.     

Theoretical study of two-photon absorption properties of a series of ferrocene-based chromophores

The electronic structures, one-photon absorption (OPA), and two-photon absorption (TPA) properties of a series of ferrocene-based chromophores with TCF-type acceptors (TCF = 2-dicyanomethylene-3-cyano-4-methyl-2,5-dihydrofuran) have been studied by using the ZINDO-SOS method. The results have revealed that OPA and TPA of ferrocenyl derivatives are affected by the strength of the acceptor, especially the pi-bridge conjugation length. The TPA cross section increases with increasing acceptor strength and pi-bridge conjugation length. The TCF-type acceptor with a phenyl group can lead to a larger TPA cross section. Quadrupole molecules have the largest TPA cross sections (2000-3000 GM), which are about 4 times that of the corresponding dipolar molecules, indicating larger interactions between the top and bottom branches. Finally, the origins of the two-photon excitations for ferrocenyl derivatives are analyzed. The calculations show that ferrocenyl derivatives with TCF-type acceptors (especially quadrupole molecules) are promising candidates for TPA materials.     

One- and two-photon absorptions in asymmetrically substituted free-base porphyrins: a density functional theory study

Electronic spectra and structures of a new family of free-base porphyrin (H(2)P) derivatives with 4-(diphenylamino)stilbene (DPAS) or 4,4'-bis-(diphenylamino)stilbene (BDPAS) asymmetric substituents, recently synthesized and studied by Drobizhev et al. [J. Phys. Chem. B 110, 9802 (2006)] are investigated by density functional theory (DFT) using modern density functionals and the 6-31G* basis set. The time-dependent DFT technique is applied for calculations of one- and two-photon absorption spectra, electric and magnetic dipole moments, and for prediction of electronic circular dichroism for these chiral molecules. The four-band absorption spectrum of the H(2)P molecule (Q(x), Q(y), 0-0 and 1-0 bands) is enhanced in single-bond-linked DPAS. This enhancement is explained by hyperconjugation of the almost orthogonal pi systems and by small charge-transfer admixtures. The effect is much stronger for the double-bond- and triple-bond-linked DPAS and BDPAS substituents where absorption in the Q region transforms into a two-band spectrum. These molecules with ethenyl and ethynyl bonding of the porphyrin and donor substituent show very strong two-photon absorption in the near-infrared region. DFT calculations explain this by more efficient conjugation between the H(2)P and DPAS (BDPAS) chromophores, since they are almost coplanar: "Gerade" states of the H(2)P molecule occur in the Soret region and transform into charge-transfer states with nonzero transition moments. They are responsible for the strong two-photon absorption effects. Mixing of excitations in both chromophores explains the broadening of the Soret band. Though the calculated two-photon absorption cross sections are overestimated, the qualitative trends are reproduced and help understanding the whole genesis of spectra of these asymmetrically substituted H(2)P derivatives.     

Boron-containing two-photon-absorbing chromophores. 3. One- and two-photon photophysical properties of p-carborane-containing fluorescent bioprobes

Boron-containing two-photon-absorbing fluorophores have been prepared as new bifunctional molecules, potentially useful in two-photon excited microscopy (TPEM) and boron neutron capture therapy. They are based on a one-dimensional conjugated system containing a p-carborane entity at one end of the molecule and various electron-donating groups containing oxygen or nitrogen atoms at the other end. We investigated their one- and two-photon photophysical properties. They showed efficient fluorescence in an organic solvent, as well as in water for two of them, allowing microscopy on cell cultures. High two-photon absorption cross sections were determined in the 700-900 nm range. TPEM images were obtained with these new p-carborane-containing fluorophores, with laser intensities in the submilliwatt range.     

Determination of alignment parameters for symmetric top molecules using nonresonant two-photon absorption

The polarization dependence of the two-photon absorption signal is described directly in terms of the matrix elements of the irreducible representation of the two-photon absorption tensor operator for an ensemble with cylindrical symmetry probed with identical photons of linear polarization. Non vanishing matrix elements are easily determined from the known tensor patterns of the specific two-photon transition. The formalism is applicable to the extraction of alignment parameters for symmetric top molecules as well as diatomics produced in collisions of unpolarized particles or in the photodissociation with a single photon of linear polarization.     

o-nitrobenzyl photolabile protecting groups with red-shifted absorption: syntheses and uncaging cross-sections for one- and two-photon excitation

We evaluated the o-nitrobenzyl platform for designing photolabile protecting groups with red-shifted absorption that could be photolyzed upon one- and two-photon excitation. Several synthetic pathways to build different conjugated o-nitrobenzyl backbones, as well as to vary the benzylic position, are reported. Relative to the reference 4,5-dimethoxy-2-nitrobenzyl group, several o-nitrobenzyl derivatives exhibit a large and red-shifted one-photon absorption within the near-UV range. Uncaging after one-photon excitation was studied by measuring UV-visible absorption and steady-state fluorescence emission on model caged ethers and esters. In the whole series investigated, the caged substrates were released cleanly upon photolysis. Quantum yields of uncaging after one-photon absorption lie within the 0.1-1 % range. We observed that these drop as the maximum wavelength absorption of the o-nitrobenzyl protecting group is increased. A new method based on fluorescence correlation spectroscopy (FCS) after two-photon excitation was used to measure the action uncaging cross section for two-photon excitation. The series of o-nitrobenzyl caged fluorescent coumarins investigated exhibit values within the 0.1-0.01 Goeppert-Mayer (GM) range. Such results are in line with the low quantum yields of uncaging associated with cross-sections of 1-50 GM for two-photon absorption. Although the cross-sections for one- and two-photon absorption of o-nitrobenzyl photolabile protecting groups can be readily improved, we emphasize the difficulty in enlarging the corresponding action uncaging cross-sections in view of the observed trend of their quantum yield of uncaging.     

Investigation of the two-photon absorption cross-section in perylene tetracarboxylic derivatives: nonlinear spectra and molecular structure

We investigated the 2PA absorption spectrum of a family of perylene tetracarboxylic derivatives (PTCDs): bis(benzimidazo)perylene (AzoPTCD), bis(benzimidazo)thioperylene (Monothio BZP), n-pentylimidobenzimidazoperylene (PazoPTCD), and bis(n-butylimido)perylene (BuPTCD). These compounds present extremely high two-photon absorption, which makes them attractive for applications in photonics devices. The two-photon absorption cross-section spectra of perylene derivatives obtained via Z-scan technique were fitted by means of a sum-over-states (SOS) model, which described with accuracy the different regions of the 2PA cross-section spectra. Frontier molecular orbital calculations show that all molecules present similar features, indicating that nonlinear optical properties in PTCDs are mainly determined by the central portion of the molecule, with minimal effect from the lateral side groups. In general, our results pointed out that the differences in the 2PA cross-sections among the compounds are mainly due to the nonlinearity resonance enhancement.     

含1,3,5-三嗪和三苯胺的二苯乙烯类双光子材料

合成了以三苯胺为电子给体、1,3,5-三嗪为电子受体的新型二苯乙烯类化合物．用吸收光谱、荧光光谱、飞行质谱、核磁共振氢谱和碳谱进行了表征。这些化合物具有大的双光子吸收截面和强的频率上转换荧光,其中,由三个D-π-A结构的发色团形成的三枝状八偶极分子具有最大的双光子吸收截面和最强的双光子荧光。     

Effects of conjugation length, electron donor and acceptor strengths on two-photon absorption cross sections of asymmetric zinc-porphyrin derivatives

Exceptionally large two-photon absorption cross sections at the infrared region have been revealed by time-dependent density functional theory calculations for asymmetric charge-transfer conjugated zinc-porphyrin derivatives. The largest two-photon cross section is found to be more than one order of magnitude larger than for the conventional two-photon active organic molecules. The calculations show that the formation of strong charge-transfer states depends on the length of the conjugation bridge between the zinc-porphyrin core and the electron donor/acceptor. The two-photon absorption cross section can be greatly enhanced by increasing the strengths of the electron donor/acceptor.     

Structurally Tunable 3‐Cyanoformazanate Boron Difluoride Dyes

The straightforward synthesis of a series of 3‐cyanoformazanate boron difluoride dyes is reported. Phenyl, 4‐methoxyphenyl and 4‐cyanophenyl N‐substituted derivatives were isolated and characterized by single‐crystal X‐ray crystallography, cyclic voltammetry, and UV/Vis spectroscopy. The compounds were demonstrated to possess tunable, substituent‐dependent absorption, emission, and electrochemical properties, which were rationalized through electronic structure calculations.     

Theoretical insight into linear optical and two-photon absorption properties for a series of N-arylpyrrole-based dyes

N-arylpyrrole-based dyes possessing excellent opto-electronic properties are promising candidates for two-photon fluorescence labeling materials. The systematic investigation of novel N-arylpyrrole derivatives is of great importance for both fine-tuning electronic spectra and designing two-photon absorption (2PA) materials. We thoroughly studied influences of the π-conjugated center and N-substituted pyrrole moieties on the linear optical and 2PA properties. Our results show that introducing N-arylpyrrole produces bathochromic-shifts of the absorption and emission bands and an enhancement of the 2PA cross section (δ(max)), demonstrating that the electron-rich pyrrole moieties can efficiently increase intramolecular charge transfer. Substitution of fluorenyl with benzothiadiazole produces the lower energy gap, higher emission lifetime, red-shift of 2PA spectra and larger δ(max). The absorption and emission bands are highly dependent on the nature of the active building blocks. The aromatic rings attached to pyrrole can modulate the absorption peaks in the high energy and thus subtly modify the electronic properties.     

Photoinduced enhancement of luminescence from (dibenzoylmethanato)boron difluoride in polymethyl methacrylate

The photochemical behavior of (dibenzoylmethanato)boron difluoride in the polymethyl methacrylate matrix was studied. Photoinduced luminescence enhancement was observed, and a mechanism of the process related to the aggregation of high-polarity luminophore molecules under irradiation was suggested.     

Two-photon absorption of [2.2]paracyclophane derivatives in solution: a theoretical investigation

The two-photon absorption of a class of [2.2]paracyclophane derivatives has been studied using quadratic response and density functional theories. For the molecules investigated, several effects influencing the two-photon absorption spectra have been investigated, such as side-chain elongation, hydrogen bonding, the use of ionic species, and solvent effects, the latter described by the polarizable continuum model. The calculations have been carried out using a recent parallel implementation of the polarizable continuum model in the DALTON code. Special attention is given to those aspects that could explain the large solvent effect on the two-photon absorption cross sections observed experimentally for this class of compounds.