Qualitative estimation of the dependence of the number of energetic compounds on their oxygen coefficient

The ratio between the numbers of structural formulas of C,H,N,O-containing energetic compounds belonging to the classes of fuels (low values of the oxygen coefficientA), explosives (mediumA), and oxidants (highA values) was studied by a computer generation procedure. The number of the theoretically possible structural formulas was found to decrease rapidly on going from fuels to explosives and then to oxidants; this observation agrees with the data on the numbers of various energetic compounds currently used and proposed. The strategy of the search for new compounds with the specified properties is described in brief, and its applicability to the search for explosives and oxidants with a small (up to 12) number of atoms in a molecule is evaluated. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 7, pp. 1304–1310, July, 1998.     

Algorithm for determination of the local similarity of molecules

An algorithm for seeking common structural fragments in compounds of different classes is developed. The algorithm allows for the molecular geometry and atomic characteristics, It may be used for recognition of compounds with properties associated with the local similarity of molecules such as ligand complementarity to a receptor. An example of seeking common structural elements for nondrug analgesics (para-acetamidophenol, acetylsalicylic acid, and amidopyrine) is given. I. I. Polzunov Altai State Technical University. Translated fromZhurnal Strukturnoi Khimii, Vol. 36, No. 6, pp. 1083–1087, November–December, 1995. Translated by L. Smolina     

Vibrational spectra and intramolecular dynamics of six-membered azacycles in the ground and excited states

The geometrical structure, force fields, and parameters of vibrational-rotational interaction of six-membered azacyclic compounds in the ground and excited states are estimated using the structural dynamic model of a polyatomic molecule. Translated fromZhurnal Struktumoi Khimii, Vol. 38, No. 2, pp. 345–349, March–April, 1997.     

Evaluation of the relationship between spectral and structural similarity in IR spectroscopy

Representation of a structural formula of a compound as a complete set of nonisomorphic k-vertex (2 ≤k≤7) connected fragments is used to evaluate the structural similarity of compounds. The spectra and structures of spectrally or structurally alike compounds are compared statistically using a database containing 32,000 IR spectra and structures. This study reveals some tendencies typical for both full IR spectra and their abbreviated versions represented by sets of most characteristic peaks. Applicability of IR databases to spectrum simulation for compounds with a specified structure is justified statistically. A method is proposed for evaluating the efficiency of a search algorithm selecting structural analogs of the compound from an IR database according to the query spectrum. Translated fromZhurnal Strukturnoi Khimii, Vol. 41, No. 2, pp. 379–390, March–April, 2000.     

NMR and cation-cation interactions involvings 2 lone pairs

The results of NMR spectroscopy on^203,205Tl,²⁰⁷Pb,¹²⁵Te, and other nuclei are used to characterize an anomalous effect of the s² lone pair on interatomic interactions in the fluorides, oxides, and chalcogenides of some elements of Groups 13–18 of the periodic table. Data for crystals of TISe structural type and related compounds, for various structural modifications of TIF, PbO, and TeO₂ crystals, and also for liquids and liquid solutions [(TIOC₂H₅)₄, (XeF₆)₄, etc.], of vanadium tellurite and lead silicate glasses are considered. It is shown that the electronnuclear interactions and the structural peculiarities of compounds with underoxidated cations are due to the effect of the excited states of ions with the electronic configuration s². Translated fromZhumal Strukturnoi Khimii, Vol. 38, No. 1, pp. 173–195, January–February, 1997.     

Crystal-chemical aspects of the structural similarity of rare earth polychalcogenides LnX2−x (x=0–0.25)

The structures of rare earth dichalcogenides are investigated. The symmetry and unit cell parameters are considered, and their relationship with those of the PbFCl and anti-Cu₂Sb structural prototypes is analyzed. The interatomic distances in the Ln³⁺, X²⁻, and (X₂)²⁻ layers and the compatibility factors are examined. It is discussed how the degree of polymerization of the chalcogen ions in the (X₂)²⁻ layers and the compatibility of the latter with the Ln³⁺ and X²⁻ layers affect the symmetry and the twinning and polymorhism abilities of the compounds. Institute of Inorganic Chemistry, Siberian Branch, Russian Academy of Sciences. Translated fromZhurnal Strukturnoi Khimii, Vol. 37, No. 6, pp. 1140–1170, November–December, 1996. Translated by L. Smolina     

Vibrational spectra and the structure of long-chain aliphatic compounds

Polymorphism and the structure of mesomorphous states of long-chain aliphatic compounds (LAC) have been studied by vibrational spectroscopy (theory, experiment) using calorimetry, polarizing microscopy (PM), and X-ray diffraction (XRD) analysis as auxiliary methods. LAC are represented by homologous series of alkyl- and alkoxybenzoic acids, alkylcyclohexanecarboxylic acids, their completely or partially fluoroalkyl-substituted analogs, and 4-cyano-4′-(n-alkoxy)biphenyls. The studies were performed at 77–500 K. IR absorption and Raman spectra were measured at 30–4000 cm⁻¹. The compounds are characterized by conformational polymorphism. The molecules and their H-complexes undergo structural rearrangements during phase and conformational transitions. In the course of the rearrangements, alkyl and fluoroalkyl radicals (AR and FAR) are twisted, and carboxyl groups are disordered. The rearrangements dictate the structure of mesophases, which are mostly formed of H-complexes consisting of dimers, monomers, and open associates. N. G. Chernyshevskii Saratov State University. Institute of Physics, Ukrainian Academy of Sciences. Translated fromZhurnal Strukturnoi Khimii, Vol. 36, No. 2, pp. 338–344, March–April, 1995. Translated by L. Smolina     

Two new isoflavonoid monogalactosides from <Emphasis Type="Italic">Trifolium pratense</Emphasis> roots

Formononetin and the new isoflavonoid glycosides formononetin-7-O-β-D-galactopyranoside and inermin-3-O-β-D-galactopyranoside were isolated from Trifolium pratense L. roots. The structures of the isolated compounds were proved using chemical transformations and UV, PMR, and ¹³C NMR spectra. __________ Translated from Khimiya Prirodnykh Soedinenii, No. 1, pp. 21–23, January–February, 2008.     

Inorganic crystal structure database. Design and operational experience

The Inorganic Crystal Structure Database is a section of the Databank on the Properties of Materials for Electronics that was created at the Institute of Inorganic Chemistry, Siberian Branch, Russian Academy of Sciences. The database, which is supplied with constantly updated software, includes quantitative structural data and is designed for solving materials-technology problems. The database contains information on crystal structures of complex and ordinary oxides (including compounds with HTSC properties), chalcogenides, intermetallic compounds, inorganic complexes, etc. More than 20 scientific works on different topics were performed using the database. Institute of Inorganic Chemistry, Siberian Branch, Russian Academy of Sciences. Translated fromZhurnal Strukturnoi Khimii, Vol. 36, No. 3, pp. 559–563, May–June, 1995. Translated by L. Smolina     

Structural analogy principle for estimating gas chromatographic retention indices

It is shown that using additive schemes complying with the general principle of structural analogy for all molecular transformations is admissible for calculating gas chromatographic retention indices, which are very important analytical parameters for identification of organic compounds. From this viewpoint, we compare the possibilities of using the homomorphism factors and the fit increments of the retention indices of reagents and products in chemical reactions, including those of some topochemically equivalent hypothetical transformations of the structure and composition of organic molecules. Scientific-Research Institute of Chemistry, St. Petersburg University. Translated fromZhurnal Strukturnoi Khimii, Vol. 37, No. 4, pp. 784–795, July–August, 1996. Translated by L. Smolina     

Reactions of chiral phosphoramidites with complexes Pd(COD)Cl2 and Pt(COD)Cl2

Reactions of phosphoramidites based on (−)-ephedrine and [(1S)-endo]-(−)-borneol with the complexes M(COD)Cl₂ (M is Pd or Pt, and COD is cycloocta-1,5-diene) were studied. The formation ofcis andtrans complexes of the general formulas MCl₂L₂ and M₂Cl₂(μ-Cl)₂L₂ was observed. The structures of the resulting compounds were established by³¹P,¹³C, and¹⁹⁵Pt NMR and IR spectroscopy and by plasma desorption mass spectrometry. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 8, pp. 1627–1630, August, 1998.     

A method of finding an informative set of molecular graph indices for the prediction of chemical compound properties

The method and algorithms for predicting properties of chemical compounds by their quantitative structural characteristics, in particular, molecular graph indices, are presented. The prediction procedure consists of establishing the priority of indices for training sample compounds, classifying control sample compounds in the Euclidean space of indices, and finding a locally optimum (informative) index set giving a least prediction error. The algorithms have been successfully tested using the BACC system (analysis and classification of biologically active compounds), created at the S. V. Sobolev Institute of Mathematics of the Siberian Branch of the Russian Academy of Sciences. Translated fromZhumal Strukturnoi Khimii, Vol. 38, No. 4, pp. 795–802, July–August, 1997.     

New genistein monogalactoside from the aerial part of <Emphasis Type="Italic">Trifolium pratense</Emphasis>

Formononetin, prunetin, genistein, genistin, and a new genistein glycoside genistein-7-O-β-D-galactopyranoside were isolated from the aerial part of Trifolium pratense L. The structures of the isolated compounds were established based on chemical transformations and UV, ¹H, and ¹³C NMR spectra. __________ Translated from Khimiya Prirodnykh Soedinenii, No. 2, pp. 141–143, March–April, 2008.     

Indolic metabolites from the new marine bacterium Roseivirga echinicomitans KMM 6058T

N-Acetyl-(1) and N,N-diacetyl-(2) tryptamines were isolated from the butanol extract of culture medium of the new marine bacterium Roseivirga echinicomitans KMM 6058^T. The structures of the compounds were proved using mass spectrometry, UV, PMR, and ¹³C NMR spectroscopy and by comparing these data with mass and NMR spectra of synthetic samples of 1 and 2. Compound 2 was isolated from a natural source and synthesized for the first time. The cytotoxic activity of the compounds was studied using Erlich carcinoma tumor cells, murine erythrocytes, and sperm and egg cells of the sea urchin Strongylocentrotus intermedius. __________ Translated from Khimiya Prirodnykh Soedinenii, No. 6, pp. 581–584, November–December, 2006.     

Electron diffraction study of molecular structure and inversion potential for 1,1-dimethylsilacyclobutane and 1,1,3,3-tetramethyl-1,3-disilacyclobutane

The geometrical parameters for 1,1-dimethylsilacyclobiitane and 1,1,3,3-tetramethyl-13-disilacyclobutune are detemiined by gas phase electron diffraction analysis using a dynamic model, which considers ring inversion as a large-amplitude motion. The structural and potential function parameters were refined with allowance for molecular geometry relaxation estimated by quantum chemical calculations with an HF/6-311G** basis. The potential function of 1,1-dim ethylsilacyclobutane is represented as V(ϕ) = V₀[(ϕ/ϕ_e)² − 1]² with V₀ = 1.3 ± 1.2 kcallmole and ϕ_e = 29.7±4.5°, where ϕ is the ring puckering angle. A more reliable estimate for the height of the barrier (V₀ = 0.56 kcallmole) was obtained by solving the one-dimensional quantum vibrational problem and by fitting the frequency of the 0 →2 transition to the experimental value. For 1,1,3,3-tetram ethyl-1,3-disilacyclobutane, the potential function is adequately represented bx V(ϕ) = Aϕ², where A = (4.9 ± 1.8) · 10⁻⁴ kcall(mole · deg²) with a minimum coiresponding to a planar ring conformation with ϕ = 0°. The calculated structural parameters are compared with the data for related compounds. Translated fromZhumal Struktumoi Khimii. Vol. 41, No. 2, pp. 269–284, March–April, 2000     

Conformational structure of divinylacetylene

Ab initio quantum chemical calculations of the divinylacetylene molecule with different mutual orientations of vinyl groups are carried out using the 6–31G*/MP2 basis set. The torsional potential is approximated by a Fourier series. It is shown that the second term of the series dominates. The enthalpies of the cis- and trans-isomers are nearly equal; the maximum corresponds to the gosh-orientation (180.4 cm⁻¹ with respect to the cis-form). The vibrational spectra of the compounds with cis-, gosh-, and trans-orientations of vinyl groups are analyzed based on the ab initio calculations. It is concluded that the experimental data available in the literature agree with the hypothesis that divinylacetylene exists as cis- and trans-isomers. Translated fromZhumal Strukturnoi Khimii, Vol. 39, No. 4, pp. 610–617, July–August, 1998.     

Reaction of frangula-emodin with <Emphasis Type="Italic">α</Emphasis>-bromoalkylmethylketones

The alkylation of 1,6,8-trihydroxy-3-methylanthraquinone (frangula-emodin) by α-bromoalkylmethylketones was investigated. Hydroxyls in the 1-and 8-positions of the β-derivatives were O-acylated. The compositions and structures of the prepared compounds were confirmed by elemental analysis and UV, IR, PMR, and ¹³C NMR spectroscopy. __________ Translated from Khimiya Prirodnykh Soedinenii, No. 4, pp. 324–326, July–August, 2007.     

Evaluation of the reactivity of new activated difluoroaromatic compounds

To evaluate the reactivity of new difluroroaromatic compounds in nucleophilic substitution, the positive charges on carbon atoms of C−F bonds were calculated using the quantum-chemical semiempirical PM3 method. A correlation between the charges calculated and the chemical shifts in the¹⁹F NMR spectra was established. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 4, pp. 623–625, April, 1998.     

Sulfonyl chlorination of sulfonate-containing naphthol azo compounds

Chlorosulfonyl-containing naphthol azo compounds were prepared by reaction of the corresponding sulfonate-containing naphthol azo dyes with thionyl chloride in the presence of a catalytic quantity of N,N-dimethylformamide and various solvents. The yields and reaction selectivity of chlorosulfonyl-containing naphthol azo compounds were discussed according to the properties of solvents. It was demonstrated that high chemical selectivity and high yield were achieved by using benzene, toluene or thionyl chloride as solvent. Additionally, on account of unstable properties of sulfonyl chloride compounds in MS and ¹H-NMR analyses, a new analytical method using stable sulfonamide is put forward to verify the chemical structures of the corresponding sulfonyl chloride compounds indirectly. __________ Translated from Journal of Dalian University of Technology, 2008, 48(1): 26–32