Intermolecular hydrogen bonding in the binary mixture [(C2H5)2CO + CH3OH] probed by polarized Raman measurements and DFT calculations

The Raman spectra of neat (C₂H₅)₂CO (pentanone) and its binary mixtures with hydrogen donor solvent (CH₃OH), [(C₂H₅)₂CO + CH₃OH] having different mole fractions of the reference system, (C₂H₅)₂CO in the range 0.1-0.9 at a regular interval of 0.1 were recorded in the CO stretching region. In neat liquid, the Raman peak appears asymmetric. The asymmetric nature of the peak has been attributed to the CO stretching mode of the two conformers of (C₂H₅)₂CO having C₂ and C_2v point groups and the corresponding bands at ∼1711 and ∼1718 cm⁻¹, respectively. A careful analysis of the I_iso (isotropic component of the Raman scattered intensity) at different concentrations reveals that upon dilution with methanol, at mole fraction C = 0.6, an additional peak in the CO stretching region is observed at ∼1703 cm⁻¹ which is attributed to the hydrogen bonding with methanol. A peculiar feature in this study is that upon dilution, the peak at ∼1718 cm⁻¹ shows a minimum at C = 0.6, but on further dilution it shows a blue shift. However, the other peak at ∼1711 cm⁻¹ shows a continuous red shift with dilution as well as a maximum at C = 0.7 in the linewidth vs. concentration plot, which is essentially due to competition between motional narrowing and diffusion phenomena. A significant amount of narrowing in the Raman band at ∼1718 cm⁻¹ can be understood in terms of caging effect of the reference molecule by the solvent molecules at high dilution. A density functional theoretic (DFT) calculation on optimized geometries and vibrational frequencies of two conformers of neat (C₂H₅)₂CO in C₂ ad C_2v forms and the complexes with one and two CH₃OH molecules with both the conformers was performed. The experimental results and theoretical calculations together indicate a co-existence of two conformers as well as hydrogen bonded complex with methanol in the binary mixture, [(C₂H₅)₂CO + CH₃OH] at intermediate concentrations.     

Investigation of nu(N-H) and nu(C-N) stretching modes of propylamine (C3H7NH2) in a binary system C3H7NH2 + CH3OH via concentration dependent Raman study and ab initio calculations

Raman spectra of propylamine (C3H7NH2) and its binary mixtures, C3H7NH2 + CH3OH with varying mole fractions of the reference system, C3H7NH2, C were recorded in two widely apart wavenumber regions, 3100-3600 cm(-1) and 1225-1325 cm(-1). In the former region, the two Raman bands at approximately 3305 and approximately 3326 cm(-1), obtained after the line shape analysis, which were assigned to symmetric nu(N-H) and anti-symmetric nu(N-H) stretching modes, respectively, show a downshift upon dilution. However, whereas the nu(N-H) anti-symmetric mode shows a shift of 18.6 cm(-1), the nu(N-H) symmetric mode shows a much smaller shift (5.7 cm(-1)) between neat liquid and high dilution, C = 0.1. This aspect has been explained using the optimized geometries calculated employing ab initio theory (MP2 level) for the neat C3H7NH2 and its different hydrogen-bonded complexes. The linewidth versus concentration plot for the nu(N-H) anti-symmetric stretching mode, however exhibits a distinct maxima at C = 0.4, which has been explained as a slight departure from the concentration fluctuation model. In the latter region, a symmetric peak is observed, which corresponds to nu(C-N) stretching mode, which shows an upshift upon dilution and an almost linear concentration dependence. This has also been explained in terms of the parameters obtained from the optimized geometries of the different hydrogen-bonded complexes.     

Regioselective control of the nickel-mediated coupling of acetylene and carbon dioxide - A DFT study

The nickel-mediated coupling of asymmetric alkynes with carbon dioxide is known to be highly regioselective with respect to the formation of nickelacycle intermediates and α,β-unsaturated carboxylic acid products. Using density functional theory (DFT), we have investigated the effect that parameters such as acetylene-substituent, ancillary ligand and solvent have on the potential energy surface of the nickelacycle coupling reaction. 3-R-substituted nickelacycles are the thermodynamically preferred product in all cases surveyed, however, the transition structure characterised by the attack of CO₂ on the alkyne carbon distal from the R-group is generally lower in energy, making the 2-R-substituted nickelacycle the kinetically favoured product. Ligating the zerovalent nickel species with the diazabicyclo[5.4.0]undec-7-ene (DBU) ancillary ligand in preference to 2,2′-bipyridine (BIPY) leads to lower activation energies for the coupling reaction and products that are less susceptible to steric bulk in the 2-position of the nickelacycle. Solvation with dimethylformamide (DMF) has the advantage of lowering the activation barrier for the coupling reaction when compared to tetrahydrofuran (THF).     

Solid state characterization of an antioxidant alkaloid boldine using vibrational spectroscopy and quantum chemical calculations

Boldo (Peumus boldus Mol.), a Chilean tree traditionally employed in folk medicine and recognized as a herbal remedy in a number of pharmacopoeias, mainly for the treatment of liver ailment, has recently been the subject of increasing attention. Boldine, in particular, the major and most characteristic alkaloid constituent of this plant species, now emerges as its most interesting active principle from the pharmacological viewpoint.In the present work the structural and spectral characteristics of boldine have been studied by methods of infrared, Raman spectroscopy and quantum chemistry. Electrostatic potential surface, optimized geometry, harmonic vibrational frequencies, infrared intensities and activities of Raman scattering were calculated by ab initio Hartree-Fock (HF) and density functional theory (DFT) employing B3LYP with complete relaxation in the potential energy surface using 6-311G(d,p) basis set. A complete vibrational assignment is provided for the observed Raman and infrared spectra of boldine molecule.     

Structure of the Cu(Salen) molecule Cuo<Subscript>2</Subscript>N<Subscript>2</Subscript>C<Subscript>16</Subscript>H<Subscript>14</Subscript> according to gas-phase electron diffraction data and quantum chemical calculations

In the framework of synchronous gas-phase electron diffraction and mass spectrometry experiment, the saturated vapor of N,N′-ethylenebis(salicylaldiminate) copper(II) CuO₂N₂C₁₆H₁₄ is studied at a temperature T 574(5) K. It is found that evaporation is congruent and the saturated vapor consists of monomeric molecules. Electron diffraction data are proved to correspond to the geometric model for the CuO₂N₂C₁₆H₁₄ molecule of C ₂ symmetry with an almost planar structure of the CuN₂O₂ coordination fragment and internuclear distances \(r_{h_1 } \)(Cu-O) = 1.917(13) Å and \(r_{h_1 } \)(Cu-N) = 1.931(15) Å. The stuctural parameters obtained are compared to those quantum chemically calculated and molecular parameters in crystals.     

Theoretical investigation on H2 elimination reactions of germylenoid H2GeLiF with RH (R = F, OH, and NH2)

The H₂ elimination reactions of the germylenoid H₂GeLiF with RH (R = F, OH, NH₂) have been studied by using the DFT B3LYP and QCISD methods. The calculated results indicate that all the mechanisms of the three reactions are identical to each other and under the same condition the H₂ elimination reactions should occur easily in the order of H-F > H-OH > H-NH₂. In THF solvent the H₂ elimination reactions get more difficult than in gas phase. Compared with the insertion reactions of H₂GeLiF with RH (R = F, OH, NH₂), the H₂ elimination reactions have the lower activation barriers and should be more favorable.     

Vibrational spectra and structural parameters of some XNCO and XOCN (X = H, F, Cl, Br) molecules

Ab initio calculations with full electron correlation by the perturbation method to second order and hybrid density functional theory calculations by the B3LYP method utilizing the 6-31G(d), 6-311+G(d, p), and 6-311+G(2d, 2p) basis sets have been carried out for the XNCO and XOCN (X = H, F, Cl, Br) molecules. From these calculations, force constants, vibrational frequencies, infrared intensities, Raman activities, depolarization ratios, and structural parameters have been determined and compared to the experimental quantities when available. By combining previously reported rotational constants for HNCO, ClNCO and BrNCO with the ab initio MP2/6-311+G(d, p) predicted structural values, adjusted r₀ parameters have been obtained. The r₀ values for BrNCO are: r(BrN) = 1.857(5); r(NC) = 1.228(5); r(CO) = 1.161(5) Å; BrNC = 117.5(5) and NCO = 172.3(5)°. For ClNCO the determined r₀ parameters are in excellent agreement with the previously determine r_s values, whereas those for HNCO the HNC angle is larger with a value of 126.3(5)° compared to the previous reported value of 123.9(17)°. However, considering the relatively large uncertainty in the value given initially the two results are in near agreement. Structural parameters are also estimated for FNCO and XOCN (X = H, F, Cl, Br). The centrifugal distortion constants have been calculated and are compared to the experimentally (XNCO: X = H, Cl, Br) determined values. Predicted values for the barriers of linearity are given for both the XNCO (X = H, F, Cl, Br) molecules and the results were compared to the corresponding isothiocyanate molecules. The predicted frequencies for the fundamentals of the XNCO molecules compare favorably to the experimental values but some of the predicted intensities differ significantly from those in the observed spectra. The two OCN bends for HOCN have been assigned and the frequencies for the two corresponding fundamentals of DOCN are predicted.     

Thermal decomposition of cobalt nitrato compounds: Preparation of anhydrous cobalt(II)nitrate and its characterisation by Infrared and Raman spectra

The thermal decomposition of Co(NO₃)₂·6H₂O (1) as well as that one of NO[Co(NO₃)₃] (Co(NO₃)₂·N₂O₄) (2) was followed by thermogravimetric (TG) measurements, X-ray recording and Raman and IR spectra. The stepwise decomposition reactions of 1 and 2 leading to anhydrous cobalt(II)nitrate (3) were established. In N₂ atmosphere, cobalt oxides are finally formed whereas in H₂/N₂ (10% H₂) cobalt metal is produced. Rapid heating of cobalt(II)nitrate hexahydrate causes melting (formation of a hydrate melt) and therefore side reactions in the hydrate melt by incoupled reactions and evolution/evaporation of different species as, e.g., HNO₃, NO₂, etc. In case of larger amounts in dense packing in the sample container, the formation of oxo(hydoxo)nitrates is possible at higher temperature. For 2, its thermal decomposition to 3 was followed and its decomposition mechanism is proposed.     

Reactions of trimethinecyanines of the 1,3-dioxenium series with nucleophiles. The structures of the parent carbocation and of a product of its reaction with methanol

The chemistry and the regioselectivity of alcoholysis, aminolysis, and hydrolysis of symmetrical trimethinecyanine carbenium ions in 4-[3-(2,2-diorganyl-6-phenyl-4H-1,3-dioxen-4-ylidene) prop-1-enyl]-2,2-diorganyl-6-phenyl-1,3-dioxenium perchlorates (4a,b) were investigated. The structures of trimethinecyanine 4,5:4′,5′-bisannelated at the methine chain (3) and of a product of the reaction of nonannelated trimethinecyanine with the methoxide anion were established by X-ray diffraction analysis,¹H NMR spectroscopy, and quantum-chemical calculations (PM3). The nucleophile attacks the mesomeric π-conjugated system of the trimethinecyanine cation selectivily at the C(6) atom of one of the dioxenium fragrments, the second dioxenium ring being deactivated. Alcoholysis affords products of addition of the methoxy group to trimethinecyamines. In the course of aminolysis and hydrolysis, the dioxenium ring that is subjected to the attack eliminates acetone to form 1,3-dioxenylidenepropenylic derivatives of 1,3-enaminoketones and 1,3-ketoenols, respectively. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 3, pp. 521–529, March. 1999.     

Argon matrix effect on the geometry and infrared spectrum of H2CMH2 (M = Ti, Zr, Hf): A theoretical study

Within the framework of polarizable continuum model with integral equation formalism (IEF-PCM), an argon matrix effect on the geometry and infrared frequencies of the agostic H₂CMH₂ (M = Ti, Zr, Hf) methylidene complexes was investigated at B3LYP level of theory with the 6-311++G(3df,3pd) basis set for C, H, and Ti atoms and Stuttgart/Dresden ECPs MWB28 and MWB60 for the Zr and Hf atoms. At the B3LYP/IEF-PCM level of theory, H₂CTiH₂ was optimized to an energy minimum having a pyramidal structure. The calculated dipole moment of this structure is 3.06 D. The B3LYP/IEF-PCM simulations gave the three complexes’ agostic angle ∠HCM (°), distance r(H?M) (Å), and CM bond length r(CM) (Å) as follows: ∠HCTi = 87.4, r(H?Ti) = 2.079, r(CTi) = 1.803; ∠HCZr = 89.3, r(H?Zr) = 2.243, r(CZr) = 1.956; ∠HCHf = 94.7, r(H?Hf) = 2.343, r(CHf) = 1.972. As a comparison, the B3LYP simulations gave the values as follows: ∠HCTi = 91.5, r(H?Ti) = 2.150, r(CTi) = 1.811; ∠HCZr = 92.9, r(H?Zr) = 2.299, r(CZr) = 1.955; ∠HCHf = 95.6, r(H?Hf) = 2.352, r(CHf) = 1.967. As far as the MH₂ symmetric and asymmetric stretching and CH₂ wagging frequencies are concerned, the IEF-PCM calculated values are in better agreement with the experimental argon matrix ones than those calculated based on a gas phase model.     

The synthesis and coordination chemistry of 2,6-bis(pyrazolyl)pyridines and related ligands — Versatile terpyridine analogues

Derivatives of 2,6-di(pyrazol-1-yl)pyridine and 2,6-di(pyrazol-3-yl)pyridine have been used as ligands for 15 years, and have both advantages and disadvantages in this regard compared to the much more widely investigated terpyridines. A review of the synthesis of these and some related ligand types, and a survey of their complex chemistry, are presented. Highlights of the latter include luminescent lanthanide compounds for biological sensing, and iron complexes showing unusual thermal and photochemical spin-state transitions.     

The chemistry of binuclear palladium(II) and platinum(II) complexes

The chemistry of binuclear palladium(II) and platinum(II) complexes has been reviewed. This review deals with complexes derived from various classes of ligands and covers various aspects, viz. synthesis, spectroscopic and structural features and chemical reactivity, of these complexes. Applications of these complexes are briefly described in the respected sections.     

Thermodynamic and spectroscopic study of the interaction of Cu(II), Ni(II), Zn(II) and Ca(II) ions with 2-amino-N-(2-oxo-2-(2-(pyridin-2-yl)ethyl amino)ethyl)acetamide,a pseudo-mimic of human serum albumin

The protonation equilibria of 2-amino-N-(2-oxo-2-(2-(pyridin-2-yl)ethyl amino)ethyl)acetamide ([H₂(556)–N]) and the complexation of this ligand with Cu(II) Ca(II), Zn(II) and Ni(II) have been studied by glass electrode potentiometry and UV–visible spectrophotometry. From pH ∼2.00–11.00, five models for Cu(II) with the following complexes; MLH, ML, MLH₋₁, MLH₋₂ and MLH₋₃ were generated and observed to describe the experimental data equally well as far as the statistical criteria were concerned. The MLH₋₂ complex predominates at physiological pH in all five models, while the MLH₋₁ complex species exists only at low concentration in two models. The coordination in the MLH₋₂ complex suggested the involvement of one amino, two deprotonated peptides and one pyridyl nitrogen atoms. Molecular mechanics (MM) calculations confirmed the MLH₋₂ complex as the most stable species. Speciation calculations, using a blood plasma model, predicted that the Cu(II)–[H₂(556)–N] complex is able to mobilize Cu(II). Octanol/water partition of CuLH₋₂ showed that 30% of the complex went into the octanol phase, hence promoting percutaneous absorption of copper. The complex is a poor mimic of native copper–zinc superoxide dismutase.