Metal-specific interactions of H2 adsorbed within isostructural metal-organic frameworks

Diffuse reflectance infrared (IR) spectroscopy performed over a wide temperature range (35-298 K) is used to study the dynamics of H(2) adsorbed within the isostructural metal-organic frameworks M(2)L (M = Mg, Mn, Co, Ni and Zn; L = 2,5-dioxidobenzene-1,4-dicarboxylate) referred to as MOF-74 and CPO-27. Spectra collected at H(2) concentrations ranging from 0.1 to 3.0 H(2) per metal cation reveal that strongly red-shifted vibrational modes arise from isolated H(2) bound to the available metal coordination site. The red shift of the bands associated with this site correlate with reported isosteric enthalpies of adsorption (at small surface coverage), which in turn depend on the identity of M. In contrast, the bands assigned to H(2) adsorbed at positions >3 ? from the metal site exhibit only minor differences among the five materials. Our results are consistent with previous models based on neutron diffraction data and independent IR studies, but they do not support a recently proposed adsorption mechanism that invokes strong H(2)···H(2) interactions (Nijem et al. J. Am. Chem. Soc.2010, 132, 14834-14848). Room temperature IR spectra comparable to those on which the recently proposed adsorption mechanism was based were only reproduced after contaminating the adsorbent with ambient air. Our interpretation that the uncontaminated spectral features result from stepwise adsorption at discrete framework sites is reinforced by systematic red shifts of adsorbed H(2) isotopologues and consistencies among overtone bands that are well-described by the Buckingham model of molecular interactions in vibrational spectroscopy.     

Dissipative dynamics within the electronic friction approach: the femtosecond laser desorption of H2/D2 from Ru(0001)

An electronic friction approach based on Langevin dynamics is used to describe the multidimensional (six-dimensional) dynamics of femtosecond laser induced desorption of H(2) and D(2) from a H(D)-covered Ru(0001) surface. The paper extends previous reduced-dimensional models, using a similar approach. In the present treatment forces and frictional coefficients are calculated from periodic density functional theory (DFT) and essentially parameter-free, while the action of femtosecond laser pulses on the metal surface is treated by using the two-temperature model. Our calculations shed light on the performance and validity of various adiabatic, non-adiabatic, and Arrhenius/Kramers type kinetic models to describe hot-electron mediated photoreactions at metal surfaces. The multidimensional frictional dynamics are able to reproduce and explain known experimental facts, such as strong isotope effects, scaling of properties with laser fluence, and non-equipartitioning of vibrational, rotational, and translational energies of desorbing species. Further, detailed predictions regarding translations are made, and the question for the controllability of photoreactions at surfaces with the help of vibrational preexcitation is addressed.     

Construction of divergent anthracene arrays within dendritic frameworks

This publication presents simple methodologies for construction of divergent anthracene arrays either within structural interior or at peripheral positions of dendritic frameworks. The synthetic approaches employed multiple coupling reactions between two types of 10-functionalized 9-anthryl chlorides and two types of polyphenolic linkers, resulting in four types of dendritic architectures. Successful implementation of the syntheses was confirmed by a range of spectroscopies along with elemental analyses and size exclusion chromatography studies. The resulting dendritic molecules showed a range of solubilities in chloroform fairly affected by the dendritic backbone structures. Fluorescence spectroscopic experiments of the multichromophoric dendritic systems indicated pronounced energy delocalization functionalities via an energy migration within the branched molecular frameworks as expressed in reduced fluorescence quantum yields and complex emission decay profiles.     

Angle-dependent electronic effects in 4,4'-bipyridine-bridged Ru3 triangle and Ru4 square complexes

Use of 1,4,7,10-tetraazacyclododecane (cyclen) as a capping ligand and 4,4'-bipyridine (4,4'-bpy) as a bridging ligand enables assembly of redox-active Ru3 triangle and Ru4 square complexes. The former is produced by reacting [(cyclen)Ru(DMSO)Cl]Cl with 4,4'-bpy in a 3:1 ethanol:water mixture to precipitate [(cyclen)3Ru3(4,4'-bpy)3]Cl6.18H2O.THF (4), whereas the latter is generated as [(cyclen)4Ru4(4,4'-bpy)4](CF3SO3)8.2CF3SO3H.5MeOH (7) by reacting (cyclen)Ru(CF3SO3)3 with 4,4'-bpy in methanol. The crystal structure of 4.11H2O reveals an equilateral triangle in which the 4,4'-bpy bridges are bowed outward, such that the pyridine rings are all forced to be perpendicular to the Ru3 triangle. Consequently, adjacent pyridine rings are essentially coplanar, and the cyclic voltammogram of [(cyclen)3Ru3(4,4'-bpy)3]6+ in acetonitrile displays three distinct one-electron oxidation events. Cyclic voltammetry measurements reveal redox processes centered at E(1/2) = 0.207, 0.342, and 0.434 V versus Cp2Fe(0/+) that are assigned to 6+/7+, 7+/8+, and 8+/9+ couples of the [(cyclen)3Ru3(4,4'-bpy)3]n+ triangle, respectively. In contrast, the structure of [(cyclen)4Ru4(4,4'-bpy)4]8+ features a regular square geometry wherein the rings of the bridging 4,4'-bpy ligands are free to rotate, leading to just one four-electron oxidation couple centered at 0.430 V. Density functional theory calculations performed on [(cyclen)3Ru3(4,4'-bpy)(3)]6+ reveal metal-based orbitals with contributions from the pi system of the bridging 4,4'-bpy ligands, providing a likely pathway for electron transfer.     

Effects of intermolecular interaction and molecule-electrode couplings on molecular electronic conductance

By applying nonequilibrium Green's function and first-principle calculation, we investigate the transport behavior of a prototype of a molecular device. The intermolecular interaction and molecule-electrode coupling effects are analyzed in detail, through which we can gain insight into the complexities within a molecular device such as intermolecular charge transport contributions and the imperfect molecule-electrode contact. The existing discrepancy between theory and experiment is discussed.     

Modulation of metal-azolate frameworks for the tunable release of encapsulated glycosaminoglycans

Glycosaminoglycans (GAGs) are biomacromolecules necessary for the regulation of different biological functions. In medicine, GAGs are important commercial therapeutics widely used for the treatment of thrombosis, inflammation, osteoarthritis and wound healing. However, protocols for the encapsulation of GAGs in MOFs carriers are not yet available. Here, we successfully encapsulated GAG-based clinical drugs (heparin, hyaluronic acid, chondroitin sulfate, dermatan sulfate) and two new biotherapeutics in preclinical stage (GM-1111 and HepSYL proteoglycan) in three different pH-responsive metal-azolate frameworks (ZIF-8, ZIF-90, and MAF-7). The resultant GAG@MOF biocomposites present significant differences in terms of crystallinity, particle size, and spatial distribution of the cargo, which influences the drug-release kinetics upon applying an acidic stimulus. For a selected system, heparin@MOF, the released therapeutic retained its antithrombotic activity while the MOF shell effectively protects the drug from heparin lyase. By using different MOF shells, the present approach enables the preparation of GAG-based biocomposites with tunable properties such as encapsulation efficiency, protection and release.

Clinical and pre-clinical GAG-based biotherapeutics were encapsulated within three metal-azolate frameworks (ZIF-8, ZIF-90, and MAF-7). The resulting MOF biocomposites show different loading capacity, biopreservation properties and release profiles.     

Frontier electronic structures of Ru(tcterpy)(NCS)3 and Ru(dcbpy)2(NCS)2: a photoelectron spectroscopy study

The frontier electronic structures of Ru(tcterpy)(NCS)3 [black dye (BD)] and Ru(dcbpy)2(NCS)(2) (N719) have been investigated by photoelectron spectroscopy (PES), X-ray absorption spectroscopy (XAS) and resonant photoelectron spectroscopy (RPES). N1s XAS has been used to probe the nitrogen contribution in the unoccupied density of states, and PES, together with RPES over the N1s edge, has been used to delineate the character of the occupied density of states. The experimental findings of the frontier electron structure are compared to calculations of the partial density of states for the nitrogens in the different ligands (NCS and terpyridine/bipyridine) and for Ru4d. The result indicates large similarities between the two complexes. Specifically, the valence level spectra show two well separated structures at low binding energy. The experimental results indicate that the outermost structure in the valence region largely has a Ru4d character but with a substantial character also from the NCS ligand. Interestingly, the second lowest structure also has a significant Ru4d character mixed into the structure otherwise dominated by NCS. Comparing the two complexes the BD valence structures lowest in binding energy contains a large contribution from the NCS ligands but almost no contribution from the terpyridine ligands, while for N719 also some contribution from the bipyridine ligands is mixed into the energy levels.     

Ecoupling server: A tool to compute and analyze electronic couplings

Electron transfer processes are often studied through the evaluation and analysis of the electronic coupling (EC). Since most standard QM codes do not provide readily such a measure, additional, and user‐friendly tools to compute and analyze electronic coupling from external wave functions will be of high value. The first server to provide a friendly interface for evaluation and analysis of electronic couplings under two different approximations (FDC and GMH) is presented in this communication. Ecoupling server accepts inputs from common QM and QM/MM software and provides useful plots to understand and analyze the results easily. The web server has been implemented in CGI‐python using Apache and it is accessible at http://ecouplingserver.bsc.es . Ecoupling server is free and open to all users without login. © 2016 Wiley Periodicals, Inc.     

Changes in electronic couplings of mixed-valence systems due to through-space intramolecular interactions

The strength of the electronic interactions between the two redox moieties in fullerene-substituted mixed-valence bis(ferrocenylethynyl)ethene derivatives is modulated by the through-space intramolecular electronic interactions of C(60) with the bridging conjugated system.     

Injecting electronic excitation energy into an artificial antenna system through an Ru2+ complex

The Ru2+ complex [Ru(bpy)2(bpy-ph4-Si(CH3)3)]2+ can be electrostatically bound to the negatively charged channel entrances of dye-loaded zeolite L crystals where it acts as a functional stopcock molecule. Impressive electronic triplet-singlet excitation energy transfer from the Ru2+ complex to the acceptor dye oxazine 1 (Ox1) located inside the channels can be observed when the donor molecule is selectively excited. Time-resolved luminescence experiments have been performed on the separate components and on the assembled donor-acceptor material. The luminescence lifetime of the Ru2+ complex attached to the zeolite is reduced by a factor of 30 when Ox1 acceptor molecules are present. The fluorescence decay of Ox1 incorporated in zeolite L is single exponential with a lifetime of 3 ns. The much longer lifetime in zeolite L than in solution is due to the fact, that the diethyl groups are sterically restricted when the dye is inside the host.     

Recent advances of covalent organic frameworks in electronic and optical applications

Covalent organic frameworks (COFs) as an emerging class of porous materials have achieved remarkable progress in recent years. Their high surface area, low mass densities, highly ordered periodic structures, and ease of functionalization make COFs exhibit superior potential in gas storage and separation, optoelectronic device and catalysis. This mini review gives a brief introduction of COFs and highlights their applications in electronic and optical fields.     

Strong electronic couplings between ferrocenyl centers mediated by bis-ethynyl/butadiynyl diruthenium bridges

A series of trans-(FcC(2n))Ru(2)(Y-DMBA)(4)(C(2m)Fc) with n, m = 1 and 2 and Y-DMBA as N,N'-dimethylbenzamidinate or N,N'-dimethyl-(3-methoxy)benzamidinate have been synthesized and characterized. The intramolecular Fc...Fc distances, established through single-crystal X-ray diffraction studies, range from 11.6 to 16.6 A. Results from both voltammetric and spectroelectrochemical studies indicate that the (-C(2n))Ru(2)(Y-DMBA)(4)(C(2m-) fragments are among the most efficient mediators of intramolecular hole transfer. Density-functional calculations offer both the insight on the ground-state electronic properties and unambiguous assignment for the observed electronic absorptions.     

First-principles theoretical investigation of the electronic couplings in single crystals of phenanthroline-based organic semiconductors

The electronic couplings between adjacent molecules in the phenanthroline-based bathocuproine (BCP) and bathophenanthroline (Bphen) crystals have been studied using density functional theory on model dimers. Within the frame of the "two-state model" of charge-transfer theory, a generalized definition of the "effective transfer integral" is proposed. This definition addresses the issue arising when the lowest unoccupied molecular orbital (LUMO) [highest occupied molecular orbital (HOMO)] and LUMO+1 (HOMO-1) of the single molecules both have significant contributions to the dimer LUMO (HOMO) level. Charge-transfer integrals based on the new definition are compared with those from previous models; significant differences are found. The authors' results indicate that, within a simple Marcus theory approach, the charge-transport parameters of the BCP and Bphen crystals are expected to be similar.     

Nearest- and next-nearest-neighbor Ru(II)/Ru(III) electronic coupling in cyanide-bridged tetra-ruthenium square complexes

Electrochemical properties of cyanide-bridged metal squares, [Ru(4)](4+) and [Rh(2)-Ru(2)](6+), clearly demonstrate the role of the nearest (NN) metal moiety in mediating the next-nearest neighbor (NNN) metal-to-metal electronic coupling. The differences in electrochemical potentials for successive oxidations of equivalent Ru(II) centers in [Ru(4)](4+) are ΔE(1/2) = 217 mV and 256 mV and are related to intense, dual metal-to-metal-charge-transfer (MMCT) absorption bands. This contrasts with a small value of ΔE(1/2) = 77 mV and no MMCT absorption bands observed to accompany the oxidations of [Rh(2)-Ru(2)](6+). These observations demonstrate NN-mediated superexchange mixing by the linker Ru of NNN Ru(II) and Ru(III) moieties and that this mixing results in a NNN contribution to the ground state stabilization energy of about 90 ± 20 meV. In contrast, the classical Hush model for mixed valence complexes with the observed MMCT absorption parameters predicts a NNN stabilization energy of about 6 meV. The observations also indicate that the amount of charge delocalization per Ru(II)/Ru(III) pair is about 4 times greater for the NN than the NNN couples in these CN-bridged complexes, which is consistent with DFT modeling. A simple fourth-order secular determinant model is used to describe the effects of donor/acceptor mixing in these complexes.     

Metal-organic frameworks: structural, energetic, electronic, and mechanical properties

The structural, energetic, electronic, and mechanical properties of a series of metal-organic framework (MOF) materials have been systematically studied with the density functional based tight-binding method. The cubic array of Zn(4)O(CO2)6 units (connectors) connected by different types of organic secondary building blocks (linkers) was considered. The results show that these materials are stable with bulk moduli ranging from 0.5 to 24 GPa with decreasing size of the linker. All MOFs are semiconductors or insulators with band gaps between 1.0 and 5.5 eV, mainly determined by highest occupied molecular orbital-lowest unoccupied molecular orbital gaps of the linker molecules. The atomic charges are nearly the same for free building blocks and the solid MOFs.     

Complexes of (bpy)2Ru(II) and (Ph2bpy)2Ru(II) with a series of thienophenanthroline ligands: synthesis,characterization, and electronic spectra

A series of complexes (bpy)₂LRu(II) and (Ph₂bpy)₂LRu(II), where bpy is 2,2′-bipyridine, Ph₂bpy is 4,4′-diphenyl-2,2′-bipyridine and L is 1,10-phenanthroline (phen), [1]benzothieno[2,3-c][1,10]phenanthroline (btp), naphtho[1′,2′?:?5,4]thieno[2,3-c][1,10]phenanthroline [ntpl, l=linear], and naphtho[1′,2′?:?4,5]thieno[2,3-c][1,10]phenanthroline (ntph, h=helical) were synthesized and characterized using 2D COSY NMR spectra. The UV spectra were assigned to study their metal to ligand charge transfer (MLCT) excited states. Complexes of (bpy)₂LRu(II) showed identical absorption wavelengths (λ _max) for the MLCT of all four members of the series with the only variation being the intensity (log _ε ) for each. The MLCT of (Ph₂bpy)₂LRu(II) showed the similar behavior only with different wavelengths showing that in this heteroleptic series of complexes the MLCT is exclusively to the bpy ligands with none to thienophenanthroline (btp, ntpl, or ntph).     

Novel electronic transitions within excited doublets of dimers

We consider the electronic transition between the split components of the excited electronic doublet of a dimer species when the monomer species have permanent dipole moments. We show that the transition moment is given in terms of the permanent dipole moments of the ground and excited states of the monomers. Extension to ionic dimers and transitions between exciton bands in molecular crystals are suggested.     

Diastereoselective intramolecular SmI2-H2O-amine mediated couplings

The SmI2-H2O-amine mixture has been shown to be effective for intramolecular couplings providing diastereoselectivities of up to 100% de in the coupling of O-cyclohexenyliodophenol derivatives into heterocycles.     

Ru2(ap)4(sigma-oligo(phenyleneethynyl)) molecular wires: synthesis and electronic characterization

Reported in this contribution are the synthesis, characterization, and charge transport properties of wire-like Ru2(ap)4(OPEn), where ap is 2-anilinopyridinate and OPE is -(CCC6H4)nSCH2CH2SiMe3 with n = 1 (1) and 2 (2). Scanning tunneling microscopy (STM) measurements of compound 2 inserted into a SAM of C11 thiol reveal that molecule 2 exhibits (i) the stochastic switching characteristic of wire molecules embedded in insulating SAMs and (ii) higher conductivity than the C11 thiol SAM. More importantly, analysis of the molecular electronic decay constant (beta) exhibits a decrease of at least 15% as compared to purely organic molecular analogues. Hence, the transport characteristics of molecules can be significantly improved for nanoscale electronics through the incorporation of a Ru2 fragment into conjugated backbone.     

Novel bis-betaines and betaines within [1(4)]meta-heterophane frameworks

After prior selection of betaine building blocks for the construction of quadrupolar heterophane frameworks, a convergent "3+1" synthetic strategy is reported for the synthesis of the title macrocycles composed of heterocyclic betaine subunit(s). These typify the first example of simple cyclophanes constructed out of both highly pi-excessive and highly pi-deficient heteroaromatic moieties linked in a 1,3-alternating fashion. The chemical reactivity of the quadrupolar heterophanes 1a and 1c toward electrophiles under neutral conditions corroborated their bis-betaine structure. The structural features of the bis-betaines 1, betaines 2 x PF6 and 5 x X, and the corresponding dicationic [1(4)]heterophanes 3 x 2X and 4 x 2Cl were studied by 1H and 13C NMR spectroscopy and electrospray ionization mass spectrometry, and confirmed by single-crystal X-ray diffraction analysis of macrocycles 1a and 2a x PF6.