The molecular orientation of para-sexiphenyl on Cu(110) and Cu(110) p(2x1)O.

Controlling the molecular growth of organic semiconductors is an important issue to optimize the performance of organic devices. Conjugated molecules, used as building blocks, have an anisotropic shape and also anisotropic physical properties like charge transport or luminescence. The main challenge is to grow highly crystalline layers with molecules of defined orientation. The higher the crystallinity, the closer these properties reach their full intrinsic potential, while the orientation determines the physical properties of the film. Herein we show that the molecular orientation and growth can be steered by the surface chemistry, which tunes the molecule-substrate interaction. In addition, the oxygen reconstruction of the surface, demonstrates the flexibility of the organic molecules to adopt a given surface corrugation and their unique possibility to release stress by tilting.     

Energetics and heterodiffusion of Cu on Ag(110) stepped surfaces

A molecular‐dynamics simulation study has been performed to investigate the Cu adatom diffusion on the (110) stepped surfaces of Ag, using interatomic potentials described by the embedded atom method. We have systematically calculated the energy barriers for different possible diffusion mechanisms, which occur on the terrace and near the step edge. Our findings show that the predominant atomistic diffusion process at step edge and on the terrace is the exchange mechanism with anES barrier about 220 meV lower than that via jumping (290 meV), indicating that the incorporation of Cu adatom into Ag(110) is ‘easier’ than making a jump on the surface. On the other hand, the calculation of the Ehrlich–Schwoebel (ES) barrier demonstrates that this quantity is equal to 0 meV for the exchange process near the step edge and about 60 meV for channel–channel migration. Thus, the mass transport across steps may be important due to the lack of the ES barriers for exchange mechanism, revealing the possible layer‐by‐layer growth mode for our heterogeneous system. Copyright © 2015 John Wiley & Sons, Ltd.     

Probing enantioselectivity on chirally modified Cu(110), Cu(100), and Cu(111) surfaces

Temperature programmed desorption methods have been used to probe the enantioselectivity of achiral Cu(100), Cu(110), and Cu(111) single crystal surfaces modified by chiral organic molecules including amino acids, alcohols, alkoxides, and amino-alcohols. The following combinations of chiral probes and chiral modifiers on Cu surfaces were included in this study: propylene oxide (PO) on L-alanine modified Cu(110), PO on L-alaninol modified Cu(111), PO on 2-butanol modified Cu(111), PO on 2-butoxide modified Cu(100), PO on 2-butoxide modified Cu(111), R-3-methylcyclohexanone (R-3-MCHO) on 2-butoxide modified Cu(100), and R-3-MCHO on 2-butoxide modified Cu(111). In contrast with the fact that these and other chiral probe/modifier systems have exhibited enantioselectivity on Pd(111) and Pt(111) surfaces, none of these probe/modifier/Cu systems exhibit enantioselectivity at either low or high modifier coverages. The nature of the underlying substrate plays a significant role in the mechanism of hydrogen-bonding interactions and could be critical to observing enantioselectivity. While hydrogen-bonding interactions between modifier and probe molecule are believed to induce enantioselectivity on Pd surfaces (Gao, F.; Wang, Y.; Burkholder, L.; Tysoe, W. T. J. Am. Chem. Soc. 2007, 129, 15240-15249), such critical interactions may be missing on Cu surfaces where hydrogen-bonding interactions are believed to occur between adjacent modifier molecules, enabling them to form clusters or islands.     

Missing row reconstructed (110), (211) and (311) surfaces for FCC transition metals

Modified embedded atom method (MEAM) has been used to ascertain the change in the surface energy density of (1 × 2) missing row (MR) reconstruction from initial (1 × 1) ideal (110), (211) and (311) surfaces for seven FCC transition metals Au, Pt, Ag, Pd, Rh, Cu and Ni. The results show that the MR reconstruction can be formed naturally on the Au (110), Pt (110) and Pt (311) surfaces and are better than calculated results of the embedded atom method (EAM) while comparing with experimental results. In addition to the surface energy explanation, the results are also explained in terms of the valence electron structure and surface topography. Copyright © 2007 John Wiley & Sons, Ltd.     

Adsorption of carbon monoxide on Pd low‐index surfaces and (110) reconstructed surface

Adsorption and diffusion of carbon monoxide on Pd low‐index surfaces and missing‐row Pd (110) reconstructed surface have been investigated by the extended London–Eyring–Polyani–Sato (LEPS) method constructed by means of a five‐parameter Morse potential. All critical characteristics, such as adsorption site, adsorption geometry, binding energy, CO vibrational frequency have been obtained and compared with the experimental and theoretical data. On these surfaces, the stable adsorption sites of CO are changed with increasing CO coverage. On the missing‐row Pd (110) reconstructed surface, there are five stable adsorption sites: H₁, H₂ (H₁ and H₂ are threefold hollow sites on (111) subsurface), B (bridge site on the second layer), SB (short‐bridge site), and T (top site). Copyright © 2010 John Wiley & Sons, Ltd.     

Dimethyl methylphosphonate decomposition on Cu surfaces: supported Cu nanoclusters and films on TiO2(110)

The thermal decomposition of dimethyl methylphosphonate (DMMP), which is a simulant molecule for organophosphorus nerve agents, has been investigated on Cu clusters as well as on Cu films deposited on a TiO(2)(110) surface. Scanning tunneling microscopy studies were conducted to characterize the cluster sizes and surface morphologies of the deposited Cu clusters and films. Temperature-programmed desorption experiments demonstrated that the surface chemistry of DMMP is not sensitive to the size of the Cu clusters over the range studied in this work. DMMP reaction on an annealed 40 monolayer Cu film resulted in the desorption of H(2), methane, methyl, formaldehyde, methanol, and molecular DMMP, and reaction on the small (4.4 +/- 0.9 nm diameter, 1.8 +/- 0.6 nm height) and large (10.7 +/- 1.9 nm diameter, 4.8 +/- 1.0 nm height) Cu clusters generated similar products. Formaldehyde and methane production is believed to occur via a methoxy intermediate on the Cu surface. These products are favored on the higher coverage Cu films that completely cover the TiO(2) surface since competing reaction pathways on TiO(2) are suppressed. X-ray photoelectron spectroscopy studies showed that DMMP begins to decompose on the Cu clusters upon adsorption at room temperature and that atomic carbon, atomic phosphorus, and PO(x) remain on the surface after DMMP decomposition.     

Structures of glycine, enantiopure alanine, and racemic alanine adlayers on Cu(110) and Cu(100) surfaces

We have determined the structures of dense adlayers of glycine and alanine on the Cu(110) and Cu(100) surfaces using plane wave density functional theory. These calculations resolve several experimental controversies regarding these structures. Glycine exists on Cu(110) as a single adlayer structure, while on Cu(100) two distinct glycine adlayers coexist. The glycine structures serve as useful starting points for constructing alanine adlayer structures. We considered separately the adsorption of enantiopure alanine and racemic alanine on each surface. Adlayers of enantiopure alanine are found to be closely related to the adlayers observed for glycine. Racemic alanine adlayers on Cu(110) are structurally analogous to those observed for glycine on this surface and adopt a pseudo-racemate ordering. On Cu(100), in contrast to glycine, racemic alanine is found to adopt a single adlayer structure that is an ordered racemate. Spontaneous segregation of molecular enantiomers does not occur in racemic adsorbed mixtures on either surface. Consideration of the orientationally distinct domains that may exist for each adlayer on these surfaces provides important information for the interpretation of the adlayer domain boundaries that are commonly observed in scanning tunneling microscopy images of amino acid adlayers. Examining this set of amino acid adlayers provides useful insight into the range of subtle behaviors that can arise in these and related systems where chiral molecules form ordered adlayers on flat metal surfaces.     

CO adsorption on clean and oxidized Al(110)

Electron-energy loss (EELS) spectra and thermal desorption (TDS) traces of carbon monoxide bound to the (100) surface of aluminum are presented. CO chemisorption on clean Al(100) is characterized by vibrational bands at 440 and 2060 cm⁻¹ and by desorption at 125 K. Oxide “islands”, formed by oxidation in O₂ at 575 K, have no observed electronic influence on open metallic areas of the adsorbent but merely block CO adsorption sites.     

HCOO在Cu(110)、Ag(110)和Au(110)表面的吸附

采用密度泛函理论(DFT)以及广义梯度近似方法(GGA)计算了甲酸根(HCOO)在Cu(110)、Ag(110)和Au(110)表面的吸附. 计算结果表明, 短桥位是最稳定的吸附位置, 计算的几何参数与以前的实验和计算结果吻合. 吸附热顺序为Cu(110)(-116 kJ·mol-1)>Ag(110)(-57 kJ·mol-1)>Au(110)(-27 kJ·mol-1), 与实验上甲酸根的分解温度相一致. 电子态密度分析表明, 吸附热顺序可以用吸附分子与金属d-带之间的Pauli 排斥来关联, 即排斥作用越大, 吸附越弱. 另外还从计算的吸附热数据以及实验上HCOO的分解温度估算了反应CO2+1/2H2→HCOO的活化能, 其大小顺序为Au(110)>Ag(110)>Cu(110).     

Tilted CO on metal surfaces; CO/Pt(110), CO/Ni(110) and CO/Cu(100)

Tilting of CO at coverages greater than half a monolayer is considered as a mechanism for reducing the CO-CO repulsion. We find qualitative agreement with the experiment for CO/Pt(110), and predict a slightly smaller tilt for CO/Ni(110). For CO/Cu(100), we find that a bend of about 10° greatly reduces the repulsion.     

Adsorption and dissociation of NH3 on clean and hydroxylated TiO2 rutile (110) surfaces: a computational study

The adsorption and dissociation of NH(3) on the clean and hydroxylated TiO(2) rutile (110) surfaces have been investigated by the first-principles calculations. The monodentate adsorbates such as H(3)N-Ti(a), H(2)N-Ti(a), N-Ti(a), H(2)N-O(a), HN-O(a), N-O(a) and H-O(a), as well as the bidentate adsorbate, Ti-N-Ti(a) can be formed on the clean surface. It is found that the hydroxyl group enhances the adsorption of certain adsorbates on the five-fold-coordinated Ti atoms (5c-Ti), namely H(2)N-Ti(a), HN-Ti(a), N-Ti(a) and Ti-N-Ti(a). In addition, the adsorption energy increases as the number of hydroxyl groups increases. On the contrary, the opposite effect is found for those on the two-fold-coordinated O atoms (2c-O). The enhanced adsorption of NH(x) (x = 1-2) on the 5c-Ti is due to the large electronegativity of the OH group, increasing the acidity of the Ti center. This also contributes to diminish the adsorption of NH(x) (x = 1-2) on the two-fold-coordinated O atoms (2c-O) decreasing its basicity. According to potential energy profile, the NH(3) dissociation on the TiO(2) surface is endothermic and the hydroxyl group is found to lower the energetics of H(2)N-Ti(a)+H-O(a) and HN-Ti(a)+2{H-O(a)}, but slightly raise the energetic of Ti-N-Ti(a)+3{H-O(a)} compare to those on the clean surface. However, the dissociation of NH(3) is found to occur on the hydroxylated surface with an overall endothermic by 31.8 kcal/mol and requires a barrier of 37.5 kcal/mol. A comparison of NH(3) on anatase surface has been discussed. The detailed electronic analysis is also carried out to gain insights into the interaction nature between adsorbate and surface.     

Interaction of water with clean and oxygen precovered nickel surfaces

The adsorption of water on a Ni(111) single crystal surface, clean as well as precovered with oxygen, has been investigated with thermal desorption spectroscopy (TDS) and measurements of the adsorption-desorption equilibrium combined with XPS (X-ray photoelectron spectroscopy). The measurements have been carried out with water pressures up to 10^–5 mbar on surfaces, which have been either clean or precovered with oxygen. On the clean Ni(111) surface the first adsorbate layer with a maximum coverage of 0.42 ML (monolayers) has a desorption energy of 52 kJ/mol and a preexponential factor of desorption of 10¹⁶s^–1. A second water layer adsorbs with the desorption energy of the ice multilayer but with first order kinetics. On Ni(111) precovered with chemisorbed oxygen an additional state of molecular, more strongly bound water is found, but no dissociation. For higher oxygen precoverages where NiO islands are formed on the surface, also the water dissociation product OH is found adsorbed. On a sample covered with a closed NiO layer, adsorbed OH and molecular water in an energetically not well-defined state are found. High doses of water on oxygen-precovered Ni(111) induce a slow surface modification leading to water dissociation.     

Reconstruction and disordering on (110) fcc metal surfaces

Due to the large number of possible defects available to disorder the fcc metal (110) 2x1 missing row reconstruction, there is a particularly rich variety of possible disordered phases. The five distinct disordering scenarios that have been predicted for this reconstruction depend on the relative energy cost to generate the different defects that can form on this surface. Recent high resolution LEED measurements on the clean and alkali covered Pd(110) surfaces have explored a few of these phases. For clean Pd(110), a surface consisting of semi-ordered islands has been demonstrated to exist up to 950 K. The periodic island structure can be predicted by a simple model that includes step-step interactions and strain relaxation in the islands. Subsequent alkali adsorption destroys the island structure and forms the 2x1 missing row reconstruction. Diffraction results will be presented as a function of alkali coverage that show that the Pd(110)+K 2x1→1x1 transition is an example of deconstruction to the “even” flat phase. The existence of this intermediate phase has important implications to the growth of the missing row reconstruction and the range of the alkali-substrate interaction. In addition to these observations, higher potassium coverage data demonstrates that the Pd(110)+K work function minimum is correlated with a surface roughening transition.     

Epitaxial growth of pentacene films on Cu110

The molecular structure of thin pentacene (C(22)H(14)) films grown on a Cu(110) surface has been studied by means of He atom scattering, low energy electron diffraction, thermal desorption spectroscopy, x-ray photoelectron spectroscopy, and x-ray absorption spectroscopy. Depending on the actual film thickness three different crystalline phases have been identified which reveal a characteristic reorientation of the molecular plane relative to the substrate surface. In the monolayer regime the molecules form a highly ordered commensurate (6.5x2) structure with a planar adsorption geometry. For thin multilayers (thickness <2 nm) a second phase is observed which is characterized by a lateral ((-0.65 5.69) ( 1.90 1.37)) structure and a tilting of the molecular plane of about 28 degrees around their long axis which remains parallel to the surface. Finally, when exceeding a thickness of about 2 nm subsequent growth proceeds with an upright molecular orientation and leads to the formation of crystalline films which are epitaxially oriented with respect to the substrate. The present study thus demonstrates that also on metal substrates highly ordered pentacene films with an upright orientation of the molecular planes can be grown. Photoelectron spectroscopy data indicate further that thick films do not grow in a layer-by-layer mode but reveal a significant degree of roughness.     

From n-alkane to polyacetylene on Cu (110): Linkage modulation in chain growth

Direct coupling or transformation of inert alkanes based on the selective C–H activation is of great importance for both chemistry and chemical engineering. Here, we report the coupling of polyenes that are transformed from n-dotriacontane (n-C₃₂H₆₆)through on-surface cascade dehydrogenation on Cu (110) surface, leading to the formation of polyacetylene (PA). Three distinct linkages have been resolved by scanning tunneling microscope (STM) and noncontact atomic force micros...     

Electronic properties of Cu clusters and islands and their reaction with O2 on SnO2(110) surfaces

The deposition of Cu on SnO₂(110) surfaces, and its oxidation to Cu_xO, have been studied by low-energy electron diffraction (LEED) and angle-integrated photoemission using synchrotron radiation photoemission spectroscopy (SRPES). With the growth of copper on SnO₂(110), which was found to follow the Volmer-Weber (“islanding”) growth mode, a small amount of metal-phase Sn segregates to the surface, and even when the copper thickness reaches several tens of Å, Sn metal still is seen at the surface. But when this surface is annealed at 800 K in 5 × 10^?6 mbar O₂ for 20 min, the Sn atoms are totally converted to SnO₂. Simultaneously, the deposited Cu atoms become oxidized. The surface charges up both during LEED and SRPES data acquisition. The clean SnO₂(110) surface shows a 1 × 1 structure. With Cu deposition, the substrate LEED pattern gradually becomes weaker. With even more copper deposited, a Cu(111)-1 × 1-oriented particle structure appears, indicating coalescence of the Cu islands to 3-dimensional Cu(111) epitaxy. After subsequent heating to 500 K, the substrate signal appears again, and we see the SnO₂ 1 × 1 pattern. In conclusion, Cu atoms quite easily form clusters on the SnO₂(110) surface already after a slight heat treatment. The results show that this system is quite active towards O₂ gas exposure, and that the surface conductivity changes during O₂ exposure.     

Structure and energetics of diphenylalanine self-assembling on Cu(110)

We investigate the dynamical features of the adsorption of diphenylalanine molecules on the Cu(110) surface and of their assembling into supramolecular structures by a combination of quantum and classical atomistic modeling with dynamic scanning tunneling microscopy and spectroscopic experiments. Our results reveal a self-assembling mechanism in which isolated adsorbed molecules change their conformation and adsorption mode as a consequence of their mutual interactions. In particular, the formation of zwitterions after proton transfer between initially neutral molecules is found to be the key event of the assembling process, which stabilizes the supramolecular structures. Because of the constraints on the intermolecular bonds exerted by the surface-molecule interactions, the assembly process is strictly stereoselective, and may suggest a general model for patterning and functionalization of bare metal surfaces with short chiral peptides.     

Dehydrogenative Homocoupling of Alkyl Chains on Cu(110)

Through the interplay of high‐resolution scanning tunneling microscopy imaging and density functional theory calculations, the stepwise dehydrogenative homocoupling of alkyl chains on Cu(110) is demonstrated, proceeding from the intact chain, via the dehydrogenative intermediates, to the formation of the divers final coupling products.     

Formation of hydrogen-bridged cytosine dimers on Cu(110)

Cytosine was adsorbed onto a Cu(110) surface under UHV conditions. Annealing to 370 K resulted in the formation of a (6 x 6)gg low energy electron diffraction (LEED) pattern, even at submonolayer coverages. Examination of this structure with scanning tunneling microscopy (STM) revealed islands of zigzag chains at low coverages and large ordered domains at monolayer saturation. Further annealing to 480 K initiated a phase transition to a (6 x 2)gg structure observed both by LEED and STM. High resolution electron energy loss spectroscopy spectra for both overlayer structures exhibited mainly in-plane modes suggesting upright/tilted species on the surface. Based on the experimental data and supported by density functional theory calculations, a model is proposed for the (6 x 2)gg structure, which involves the formation of deprotonated hydrogen bridge-bonded cytosine dimers, adsorbed through the oxygen atoms.     

Adsorption of carbon monoxide and oxygen on Pt(110)

Adsorption of CO and O₂ on Pt(110) was studied by XPS, LEED and TDS methods to elucidate the role of O_ads states and structural rearrangements of the surface under the action of CO_ads in the appearance of self-oscillations in the rate of CO oxidation on Pt(110).

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, CO O₂ Pt(110) O CO CO Pt(110).