Quantum-chemical calculations of NMR chemical shifts of organic molecules: XV. Relativistic calculations of <Superscript>29</Superscript>Si NMR chemical shifts of silanes

Calculations of ²⁹Si NMR chemical shifts of 68 silanes possessing various substituents, in particular, with heavy halogens attached to silicon atom, were carried out applying an efficient calculation scheme of locally dense basis set in the framework of the electron density functional theory utilizing the Keal–Tozer functional combined with relativistic Dyall basis sets on a four-component relativistic level. The main factors of calculation accuracy of silicon chemical shifts were analyzed including the relativistic effects, environmental impact, and vibrational corrections. The mean absolute calculation error for the studied compounds series accounting for all mentioned factors was 14.0 ppm for the nonrelativistic calculation and 6.7 ppm for the four-component relativistic calculation at the range of silicon chemical shifts variation of ~250 ppm.     

Relativistic effects of chlorine in 15N NMR chemical shifts of chlorine-containing amines

Russian Journal of Organic Chemistry - Quantum-chemical calculations by DFT method demonstrated that the accounting is necessary of the shielding by chlorine of nitrogen atom in practical...     

Non-empirical and DFT calculations of <Superscript>19</Superscript>F and <Superscript>13</Superscript>C chemical shifts in the NMR spectra of substituted pentafluorobenzenes

Chemical shifts in ¹⁹F and ¹³C NMR spectra of substituted pentafluorobenzenes are calculated by Hartree-Fock and density functional theory methods. The calculated values are compared with the experimental data known from the literature. It is shown that chemical shifts in non-polar solvents can be predicted sufficiently accurately by the GIAO-DFT(PBE/L22) method. This method is used to predict the ¹⁹F and ¹³C chemical shifts of a heptafluorobenzyl cation in the SbF₅ medium. The best agreement between the calculated and experimental values is achieved when the counterion effect is taken into account.     

<Superscript>13</Superscript>C NMR chemical shifts and local structure of <Emphasis Type="Italic">cis</Emphasis>-1,4-polybutadiene: Calculation and experiment

The quantum-chemical modeling of the local conformational structures of a cis-1,4-polybutadiene macromolecule is performed, and the magnetic shielding constants of ¹³C nuclei are calculated. The theoretical values of chemical shifts in the ¹³C NMR spectra are compared with the corresponding experimental data.     

2-Amino-4-aryl-1-arylideneaminoimidazoles and Acylation Products: A Multinuclear (<Superscript>1</Superscript>H, <Superscript>13</Superscript>C, <Superscript>15</Superscript>N) NMR Study

Summary. The structure of 2-amino-4-aryl-1-arylideneaminoimidazoles in DMSO-d₆ solution was investigated by means of NMR spectroscopic methods (¹H, ¹³C, ¹⁵N). From these data the (E)-configuration at the excocyclic C=N bond and a strong preference for the conformer with the imidazole H-5 and the N=CH proton being spatially close (s-trans regarding the N–N bond) can be concluded. Reaction of the title compounds with acetic anhydride leads to mono and diacylation at the 2-amino group, whereas treatment with pivalic anhydride exclusively affords the corresponding monoacyl product. The mono- and diacylation products exhibit similar configurational and conformational properties as the parent compounds.     

15N NMR chemical shifts of ring substituted benzonitriles

15N chemical shifts in an extensive series of para (15) and meta (15) as well as ortho (8) substituted benzonitriles, X-C6H4-CN, were measured in deuteriochloroform solutions, using three different methods of referencing. The standard error of the average chemical shift was less than 0.03 ppm in most cases. The results are discussed for both empirical correlations with substituent parameters and quantum chemical calculations. The 15N chemical shifts calculated at the GIAO/B3LYP/6-31 + G*//B3LYP/6-31 + G* level reproduce the experimental values well, and include nitrogen atoms in the substituent groups (range of 300 ppm with slope 0.98 and R = 0.998, n = 43). The 15N shifts in hydroxybenzonitriles are affected by interaction with the OH group. Therefore, these derivatives are excluded from the correlation analysis. The resultant 15N chemical shift correlates well with substituent constants, both in the simple Hammett or DSP relationships and the 13C substituent-induced chemical shifts of the CN carbon.     

Structural analysis of aristolochic acids and aristolactams by correlations between calculated and experimental <Superscript>13</Superscript>C NMR chemical shifts

Aristolactam AII (1) and aristolochic acid I (2) were employed as examples in choosing the most suitable theoretical methodology for computing carbon chemical shifts (^Calc δ _C) and for the structural elucidations of aristolactams and aristolochic acids. Geometries of 1 and 2 optimized using HF, BLYP, B3LYP, and PBE methods and 6-311++G** basis set were subjected to δ_C calculations and the calculated chemical shifts obtained were correlated with their ¹³C NMR data. Different possibilities were considered (in the gaseous phase, model PCM (DMSO), and for dimeric systems 1-1 and 2-2), and an explicit solvent (DMSO) model employing BLYP/6-31G* calculations was determined to be the most efficient (R ² = 0.99631 and 0.97713, for 1 and 2, respectively).     

Fragment density functional theory calculation of NMR chemical shifts for proteins with implicit solvation

Fragment density functional theory (DFT) calculation of NMR chemical shifts for several proteins (Trp-cage, Pin1 WW domain, the third IgG-binding domain of Protein G (GB3) and human ubiquitin) has been carried out. The present study is based on a recently developed automatic fragmentation quantum mechanics/molecular mechanics (AF-QM/MM) approach but the solvent effects are included by using the PB (Poisson-Boltzmann) model. Our calculated chemical shifts of (1)H and (13)C for these four proteins are in excellent agreement with experimentally measured values and represent clear improvement over that from the gas phase calculation. However, although the inclusion of the solvent effect also improves the computed chemical shifts of (15)N, the results do not agree with experimental values as well as (1)H and (13)C. Our study also demonstrates that AF-QM/MM calculated results accurately reproduce the separation of α-helical and β-sheet chemical shifts for (13)C(α) atoms in proteins, and using the (1)H chemical shift to discriminate the native structure of proteins from decoys is quite remarkable.     

B<Subscript>24</Subscript>N<Subscript>24</Subscript> nanocages: a GIAO density functional theory study of <Superscript>14</Superscript>N and <Superscript>11</Superscript>B nuclear magnetic shielding and electric field gradient tensors

Abstract  Density functional theory (DFT) calculations were performed to determine boron-11 and nitrogen-14 nuclear magnetic resonance (NMR) and nuclear quadrupole resonance (NQR) spectroscopy parameters in the three most stable B₂₄N₂₄ fullerenes for the first time. The considered samples were first allowed to relax entirely, and then the NMR and NQR calculations were performed on the geometrically optimized models. The calculations of the ¹¹B and ¹⁴N nuclear magnetic shielding tensors and electric field gradient tensors employed the Gaussian 98 software implementation of the gauge-including atomic orbital (GIAO) method using the Becke3, Lee-Yang-Parr (B3LYP) DFT level and 6-311G** and 6-311++G** standard basis sets in each of the three optimized forms, and converted the results to experimentally measurable NMR parameters.The calculated NMR chemical shieldings of the three cages show significant differences, providing a way to identify these clusters. The evaluated NQR parameters of the ¹¹B and ¹⁴N nuclei in the clusters are also reported and discussed. Graphical abstract        

15N NMR chemical shifts for the identification of dipyrrolic structures

A variety of dipyrromethanes and dipyrromethenes have been prepared, and their 15N NMR chemical shifts have been measured by two-dimensional correlation to 1H NMR signals. The nitrogen atoms in five examples of dipyrromethanes consistently exhibit chemical shifts around -231 ppm, relative to nitromethane. Seven examples of hydrobromide salts of meso-unsubstituted dipyrromethenes consistently display 15N chemical shifts around -210 ppm, while their corresponding zinc(II) complexes exhibit chemical shifts around -170 ppm. The presence of electron-withdrawing substituents on one of the pyrrolic rings of dipyrromethenes affects the chemical shifts of both of the nitrogen nuclei in the molecule. Boron difluoride complexes of meso-unsubstituted dipyrromethenes display 15N chemical shifts around -190 ppm. Two examples of free-base dipyrromethenes bearing substituents at the meso-position exhibit 15N chemical shifts at approximately -156 ppm, and for the zinc complexes of these compounds at -162 ppm. One-bond nitrogen-hydrogen coupling constants, when measurable, were consistently in the range of -96 Hz. Since the measured 15N chemical shifts have such a high regularity correlated to structure, they can be used as diagnostic indications for identifying the structure of dipyrrolic compounds.     

Quantum-chemical calculations of NMR chemical shifts of organic molecules: IV. Effect of intermolecular coordination on <Superscript>31</Superscript>P NMR shielding constants and chemical shifts of molecular complexes of phosphorus pentachloride with azoles

Intermolecular coordination effects on the ³¹P NMR spectra of molecular complexes of N-vinylimidazole and 1-allyl-3,5-dimethylpyrazole with phosphorus pentachloride were studied by theoretical and experimental methods. The formation of intermolecular dative N→P bond was shown to be accompanied by upfield shift of the phosphorus resonance signal by more than 200 ppm. Appreciable contribution of relativistic effects to ³¹P NMR chemical shifts was revealed; the spin-orbital contribution to ³¹P shielding constant was estimated at >210 ppm. Consideration of solvent effect was found to be crucial while studying steric structure of molecular complexes of azoles with phosphorus pentachloride and intermolecular coordination effects on 31P NMR chemical shifts.     

Quantitative <Superscript>2</Superscript>H NMR spectroscopy

The selectivity of deuterium distribution between the nonequivalent positions in 3-carene (1), 4-α-acetyl-2-carene (2), and 4-(1-hydroxyethyl)-2-carene (3) has been measured by ²H-{¹H} NMR spectroscopy at the natural abundance of deuterium. These “H/D-isotope portraits” were shown to be typical of terpenes and terpenoids produced in plants via the biosynthetic DXP pathway. The mechanism of acylation of 1 was studied by the density functional theory method (PBE functional, TZ2p basis set). The six-membered ring in compound 1 is planar. However, the endo attack of electrophiles on this ring is more favorable both kinetically and thermodynamically. It was shown both experimentally and theoretically that the elimination of a hydrogen atom in the second reaction step proceeds stereoselectively at the C(2) atom from the anti position with respect to the three-membered ring and occurs with pronounced nucleophilic assistance from the carbonyl group. For Part 2, see Ref. 1. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 8, pp. 1657–1664, August, 2008.     

15N NMR chemical shifts in solid NH+4 salts

¹⁵N NMR CP/MAS spectra of solid NH⁺₄ salts show substantial chemical shift differences. Ab initio calculations indicate that changes in NH⁺₄ geometry and anion environment can account for the range of shifts.     

Adducts of zinc and copper(II) dialkyldithiocarbamate complexes with dialkylamines: Synthesis,EPR, and <Superscript>13</Superscript>C and <Superscript>15</Superscript>N CP/MAS NMR

Crystalline adducts of zinc and copper(II) dithiocarbamate (Dtc) complexes with dialkylamines [M(NHR′₂)(S₂CNR₂)₂] (M = Zn, ⁶³Cu, ⁶⁵Cu; R = CH₃, C₂H₅, or R₂ = (CH₂)₄O; R′ = C₂H₅, C₃H₇) have been preparatively isolated. The structures and spectral properties of the adducts have been studied by EPR and ¹³C and ¹⁵N MAS NMR. Chemisorption of bases on powders of dinuclear dithiocarbamates leads to their dissociation into monomeric adducts. Computer simulation demonstrates that the experimental EPR spectra of isotope-substituted copper(II) adducts have an individual character. The geometry of the copper polyhedra is intermediate between a trigonal bipyramid (TBP) and a tetragonal pyramid (TP). The TBP and TP contributions have been quantified based on EPR data. ¹³C and ¹⁵N MAS NMR data show that the Dtc ligands incorporated into the zinc adduct molecule are structurally nonequivalent. The dependence of the isotropic ¹⁵N chemical shifts of the Dtc groups on the alkyl substituents at the nitrogen atom is interpreted based on the concept of joint manifestation of the (+)inductive effect of the alkyl substituents and the mesomeric effect of the Dtc groups.     

<Superscript>1</Superscript>H and <Superscript>13</Superscript>C NMR spectra of some drimanic sesquiterpenoids

One- and two-dimensional homo- and heteronuclear correlation proton, carbon, proton—proton, and proton—carbon NMR spectra of fifteen drimanic sesquiterpenoids: 11,12-dibromodrima-5,8-dien-7-one, drim-8-en-7-one, 11-hydroxydrim-8-en-7-one, 11,12-dihydroxydrim-8-en-7-one, 11-hydroxy-11,12-epoxydrim-8-en-7-one, 11-hydroxy-11,12-epoxydrim-8-en-7-one, 8,9-epoxydriman-7-one, 8,9-epoxydriman-7-ol, 11,12-diacetoxydrim-8-en-7-ol, drimane-7,8,11-triol, 7,8-isopropylidenedioxydriman-11-al, 9, 11-dihydroxydrim-7-en-6-one, drimane-7,8,9-triol, drimane-7,8,11-triol, and drim-8-ene-7,11,12-triol were studied. The proton and carbon chemical shifts were assigned.__________Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 12, pp. 2589–2594, December, 2004.     

13C and 15N NMR chemical shifts of alkylsubstituted benzonitriles

¹³C NMR data of 14 and ¹⁵N NMR data of four alkylsubstituted benzonitriles are reported and discussed in relation to substituent effects and stereochemistry.     

Hydrolysis of isobutylaluminum aryloxides studied by <Superscript>1</Superscript>H NMR and quantum chemical methods

The results of ¹H NMR and quantum chemical studies of hydrolysis of isobutylaluminum aryloxides are presented. According to the data of ¹H NMR spectroscopy, the hydrolysis of monomeric diisobutylaluminum aryloxides (2,6-Bu₂ ^t—C₆H₃O)AlBu₂ ⁱ and (2,6-Bu₂ ^t,4-Me—C₆H₂O)AlBu₂ ⁱ occurs selectively at the Al—OAr bond to form the corresponding sterically bulky phenol and polyisobutylaluminoxane. At the molar ratios Al: H₂O = 2, the formed sterically bulky phenol reacts slowly with diisobutylaluminum monoaryloxide to form isobutylaluminum diaryloxide. Dimeric aryloxide [(2-Bu^t—C₆H₄O)AlBu₂ ⁱ]₂ is not hydrolyzed under similar conditions. The quantum chemical calculations confirmed the experimental results: the hydrolysis at the Al—OAr bond has a lower energy barrier than that at the Al—C bond because of the formation of \({H_{{H_2}O}} \ldots {O_{O - Ar}}\) hydrogen bonds.