Fluorescent Bioprobes: Structural Matching in the Docking Processes of Aggregation‐Induced Emission Fluorogens on DNA Surfaces

Whereas most conventional DNA probes are flat disklike aromatic molecules, we explored the possibility of developing quadruplex sensors with nonplanar conformations, in particular, the propeller‐shaped tetraphenylethene (TPE) salts with aggregation‐induced emission (AIE) characteristics. 1,1,2,2‐Tetrakis[4‐(2‐triethylammonioethoxy)phenyl]ethene tetrabromide (TPE‐ 1 ) was found to show a specific affinity to a particular quadruplex structure formed by a human telomeric DNA strand in the presence of K⁺ ions, as indicated by the enhanced and bathochromically shifted emission of the AIE fluorogen. Steady‐state and time‐resolved spectral analyses revealed that the specific binding stems from a structural matching between the AIE fluorogen and the DNA strand in the folding process. Computational modeling suggests that the AIE molecule docks on the grooves of the quadruplex surface with the aid of electrostatic attraction. The binding preference of TPE‐ 1 enables it to serve as a bioprobe for direct monitoring of cation‐driven conformational transitions between the quadruplexes of various conformations, a job unachievable by the traditional G‐quadruplex biosensors. Methyl thiazolyl tetrazolium (MTT) assays reveal that TPE‐ 1 is cytocompatible, posing no toxicity to living cells.     

水溶性荧光增强共轭聚合物的合成及性能研究

通过Suzuki反应将1,2-二[4-(6-溴己氧基)苯基]-1,2-二(4-溴苯基)乙烯与1,4-对苯二硼酸丙二醇酯共聚得到含有四苯乙烯基团的共轭聚合物P-0,通过后功能化得到了具有良好水溶性的聚合物P-1.通过1H-NMR、MALDI-TOF、MS和凝胶渗透色谱(GPC)对其结构进行表征.测定了P-1在水溶液中的紫外吸收光谱、荧光发射光谱以及荧光量子产率.通过P-1与小分子化合物MC-1的对比,P-1的荧光增强灵敏度优于MC-1.在P-1的溶液中分别加入沉淀剂或带有负电荷的生物大分子,两者的紫外吸收光谱与荧光发射光谱有很大的差异,通过结果对比,初步探讨了聚集诱导荧光增强的机理,经过静电作用限制苯环内旋转可以实现荧光强度的线型增长.     

Protein detection and quantitation by tetraphenylethene-based fluorescent probes with aggregation-induced emission characteristics

Three functionalized derivatives of tetraphenylethylene (TPE), namely, 1,2-bis(4-methoxyphenyl)-1,2-diphenylethene (1), 1,2-bis(4-hydroxyphenyl)-1,2-diphenylethene (2), and 1,2-bis[4-(3-sulfonatopropoxyl)phenyl]-1,2-diphenylethene sodium salt (3), were synthesized and their fluorescence properties were investigated. All the TPE molecules are nonluminescent in the solution state but are induced to emit efficiently by aggregate formation. This novel process of aggregation-induced emission (AIE) is rationalized to be caused by the restriction of intramolecular rotations of the dye molecules in the aggregate state. The possibility of utilizing the AIE effect for protein detection and quantification is explored using bovine serum albumin (BSA) as a model protein, with salt 3 being found to perform as a stable, sensitive, and selective bioprobe.     

Study of aggregation induced emission of cyano-substituted oligo (p-phenylenevinylene) by femtosecond time resolved fluorescence

The aggregation induced emission (AIE) mechanism of the cyano-substituted oligo (p-phenylenevinylene)1,4-bis [1-cyano-2-(4-(diphenylamino) phenyl) vinyl] benzene (TPCNDSB) is investigated by time resolved fluorescence technique. By reconstructing the time resolved emission spectra (TRES), it is found that in solvent of low polarity, the emission is mainly from the local emission (LE) state with high quantum yield, but in high polarity solvent, the emission is mainly from the intramolecular charge transfer (ICT) state, which is a relatively dark state, with low quantum yield. In crystal form, the restriction of transfer from LE state to ICT state results in efficient AIE.     

固载四苯基乙烯及其衍生物聚集体的聚乙烯醇薄膜对有机挥发气氛的检测

以聚乙烯醇(PVA)为粘胶剂,将四苯基乙烯(TPE)及其衍生物聚集体固载在滤纸上,以有效发挥AIE的特性.为了考察PVA浓度对四苯基乙烯及其衍生物聚集态下发光性能的影响规律,本文研究了PVA浓度分别与TPE、1,1,2,2-四-(4-(5-溴戊氧基)苯基)乙烯(TPE-OR)、(4-二苯基)苯基二苯并富烯(BpPDBF)三种化合物荧光强度之间的关系.实验结果表明,即使水含量不同,三种化合物均对PVA浓度依赖性存在着荧光强度极大值.说明提高PVA浓度,增加溶液粘度,将会使TPE及其衍生物分子内旋转进一步受限,但同时也会妨碍TPE及其衍生物形成更大的聚集体,即荧光强度的变化是这两种作用的综合体现.另外,固载于滤纸上的TPE、TPE-OR、BpPDBF薄膜可以用于检测特定有机溶剂及硝基化合物的挥发气氛,并具有比较灵敏的响应.     

Monitoring human telomere DNA hybridization and G-quadruplex formation using gold nanorods

A facile and multi-response strategy for studying the transformations of human telomere DNA from single strand (ss) to double strand (ds) and G-quadruplex has been established by using positively charged gold nanorod (AuNR) as an optical label. The conformation change information of the telomere DNA was transferred into multiple optical signals, including changes in fluorescence emission, near infrared (NIR) absorption, plasma resonance light scattering (PRLS) and dynamic light scattering (DLS) response. The formations of dsDNA and G-quadruplex DNA induced fluorescence quenching of dye on DNA, and were accompanied by the intensity decrease and blue shift of the longitudinal absorption peak of AuNRs. Meanwhile, PRLS and DLS results revealed slightly increased AuNR aggregation due to increased charge density of dsDNA and G-quadruplex DNA as compared to ssDNA. Control experiment suggests that the AuNR-based assay is highly sequence specific; and the high sensitivity allows the study of human telomere DNA at a concentration as low as 58 nM.     

Kinetic and thermodynamic control of g-quadruplex folding

A matter of speed: When allowed to fold in a K(+) /poly(ethylene glycol) solution, the guanine?(G)-rich strand of vertebrate telomere DNA forms a parallel/antiparallel G-quadruplex, which is a (3+1) hybrid, within microseconds before slowly transforming into the parallel one within hours. Thus, the conformation that a G-quadruplex initially adopts under physiological conditions may not be the one it adopts at the equilibrium state.     

Utilising tetraphenylethene as a dual activator for intramolecular charge transfer and aggregation induced emission

We report a simple design and synthesis of a donor-acceptor tetraphenylethene-naphthalimide (TPE-NI) dyad, in which TPE acts both as an electron-donor for intramolecular charge transfer (ICT) and activator for aggregation induced emission (AIE). Strong solvent-dependent photoluminescence covering almost the whole visible spectrum and AIE in its nanoparticle state compared to its solution state are demonstrated.     

Theoretical study on the aggregation-induced emission mechanism of anthryl-tetraphenylethene

Since the concept of aggregation-induced emission (AIE) was proposed by Benzhong Tang's research group in 2001, the exploration of the mechanism of AIE and the development of new high-performance AIE materials have been the focus and goal of this field. On the basis of a large number of experiment results, AIE mechanism has been well explained by lots of works, such as restricted intramolecular motion (RIM), J-aggregate et al. As tetraphenylethlene (TPE) molecules are stacked, the rotation of the benzene ring rotor is blocked, and the energy attenuation is released in the form of radiation, showing the AIE effect. In order to further explore the AIE effect of TPE, we performed electronic structure, spectrum simulation, and AIE mechanism calculations of the anthryl-tetraphenylethene (TPE-an) monomer and dimer in the gas phase, tetrahydrofuran (THF), and aqueous solutions at the B3LYP/6-31G** level. The calculation results show that TPE-an molecule is in a propeller-like configuration, and its fluorescence intensity is weak; compared with the monomer, the fluorescence intensity of the dimer increases by 87% in aqueous solution; the fluorescence intensity in the gas phase, THF solution, and aqueous solution gradually enhances with the increase of the degree of aggregation, which are consistent with the experimental results. The enhancement of fluorescence intensity is caused by the change of molecular structure caused by aggregation. This detailed AIE luminescence mechanism will provide theoretical guidance for AIE material design.     

Self-Assembled Peptidyl Aggregates for the Fluorogenic Recognition of Mitochondrial DNA G-Quadruplexes

The selective monitoring of G-quadruplex (G4) structures in living cells is important to elucidate their functions and reveal their value as diagnostic or therapeutic targets. Here we report a fluorogenic probe ( CV2 ) able to selectively light-up parallel G4 DNA over antiparallel topologies. CV2 was constructed by conjugating the excimer-forming CV dye with a peptide sequence (l -Arg-l -Gly-glutaric acid) that specifically recognizes G4s. CV2 forms self-assembled, red excimer-emitting nanoaggregates in aqueous media, but specific binding to G4s triggers its disassembly into rigidified monomeric dyes, leading to a dramatic fluorescence enhancement. Moreover, selective permeation of CV2 stains G4s in mitochondria over the nucleus. CV2 was employed for tracking the folding and unfolding of G4s in living cells, and for monitoring mitochondrial DNA (mtDNA) damage. These properties make CV2 appealing to investigate the possible roles of mtDNA G4s in diseases that involve mitochondrial dysfunction.     

聚集诱导发光新材料9,10-双[2-(1-甲基-1H-吡咯-2-基)乙烯基]蒽的 合成及性能

合成并全面表征了一种新的蒽烯类化合物9,10-双[2-(1-甲基-1H-吡咯-2-基)乙烯基]蒽(MPVAn). 该化合物具有显著的聚集诱导发光特性. 它在溶液态时几乎不发光, 但在固态时的光致发光强度达到溶液态的数百倍. 为了确定标题化合物的聚集诱导发光机制, 研究了它在不同溶液粘度及温度下的光致发光行为, 结果表明聚集态发光增强是由于分子内转动受阻所致. 它的粉末在420 nm光的激发下发射纯的黄光, 峰值为562 nm, 半峰宽为66 nm. 采用紫外-可见吸收光谱及循环伏安法研究了化合物的电子性能, 其HOMO和LUMO能级分别为－4.78和－2.28 eV.     

基于聚集诱导荧光性质的免标记DNA四链体检测以及凝血酶的传感研究

基于带正电荷硅杂环戊二烯衍生物的聚集诱导荧光性质,利用其与富含G的单链DNA和四链体作用后的荧光强度差别,发展了一种免标记的DNA四链体检测方法,并将该方法应用于凝血酶的荧光分析.     

A fluorescent supramolecular crosslinked polymer gel formed by crown ether based host-guest interactions and aggregation induced emission

Based on the combination of B21C7/dialkylammonium salt host-guest interactions and tetraphenylethylene(TPE)-based aggregation-induced emission(AIE) effect, a fluorescent supramolecular crosslinked polymer gel was successfully prepared. Compared with the solution of TPE-containing small molecules, this gel exhibited remarkable fluorescence enhancement due to the AIE effect of TPE units. The "gelation induced fluorescence emission" phenomenon can be explained by the hindered intramolecular rotation of phenyl rings of TPE. Because of the reversibility and stimuli-responsiveness of the B21C7/dialkylammonium salt host-guest interactions, the transition between the fluorescent supramolecular crosslinked polymer gel and the disassembled sol with very weak fluorescence can be realized by adding p H and thermal stimuli. This novel material contributes to the development of supramolecular chemistry, polymer science and fluorescent materials and offers a new method to construct functional supramolecular materials.     

Aggregation‐Induced Emission Rotors: Rational Design and Tunable Stimuli Response

A novel molecular design strategy is provided to rationally tune the stimuli response of luminescent materials with aggregation‐induced emission (AIE) characteristics. A series of new AIE‐active molecules (AIE rotors) are prepared by covalently linking different numbers of tetraphenylethene moieties together. Upon gradually increasing the number of rotatable phenyl rings, the sensitivity of the response of the AIE rotors to viscosity and temperature is significantly enhanced. Although the molecular size is further enlarged, the performance is only slightly improved due to slightly increased effective rotors, but with largely increased rotational barriers. Such molecular engineering and experimental results offer more in‐depth insight into the AIE mechanism, namely, restriction of intramolecular rotations. Notably, through this rational design, the AIE rotor with the largest molecular size turns out to be the most viscosensitive luminogen with a viscosity factor of up to 0.98.     

A simple visual method for DNA detection based on the formation of gold nanoparticles

A simple visual method for DNA detection during the formation of gold nanoparticles (AuNPs) was developed based on different electrostatic properties of single strand DNA (ssDNA) and double strand DNA (dsDNA). Since the ssDNA is easy to bind to AuNPs due to its exposed bases which could prevent salt-induced aggregation of AuNPs. The dsDNA always present negative charge because its negatively charged phosphate backbone is exposed. In this case, the dsDNA could disturb the adsorption between dsDNA and AuNPs and result in non-aggregation of AuNPs. After hybridization, chloroauric acid and ascorbic acid were added to the mixture solution, and the solution changed to red immediately and turned to purple in 10 min in the present of target DNA. TEM results confirmed that the change of color stemed from aggregation of AuNPs. In order to obtain accurate results by naked eye, the DNA detection assay should be conducted under pH 7.0.     

Small change in a G-rich sequence,a dramatic change in topology: new dimeric G-quadruplex folding motif with unique loop orientations

NMR study has shown that DNA oligonucleotide d(G(3)T(4)G(4)) adopts an asymmetric bimolecular G-quadruplex structure in solution. The structure of d(G(3)T(4)G(4))(2) is composed of three G-quartets, overhanging G11 residue and G3, which is part of the loop. Unique structural feature of d(G(3)T(4)G(4))(2) fold is the orientation of the two loops. Thymidine residues T4-T7 form a diagonal loop, whereas T15-T18 form an edge type loop. The G-quadruplex core of d(G(3)T(4)G(4))(2) consists of two stacked G-quartets with syn-anti-anti-anti alternation of dG residues and one G-quartet with syn-syn-anti-anti alternation. Another unusual structural feature of d(G(3)T(4)G(4))(2) is a leap between G19 and G20 over the middle G-quartet and chain reversal between G19 and G20 residues. The presence of one antiparallel and three parallel strands reveals the hitherto unknown G-quadruplex folding motif consisting of antiparallel/parallel strands and diagonal as well as edge type loops. Further examination of the influence of different monovalent cations on the folding of d(G(3)T(4)G(4)) showed that it forms a bimolecular G-quadruplex in the presence of K+, Na+, and NH4+ ions with the same general fold.