Ab initio molecular orbital calculation of fe-porphine with a double zeta basis set

An ab initio LCAO SCF MO calculation was performed on planar Fe-porphine with a double zeta basis set consisting of 300 CGTO 's. SCF wave functions of several states of Fe-porphine and its cation were obtained. The net charge of Fe is in the range of 1.39 to 1.53. The highest occupied orbital is ascertained to be a pure porphine π-MO , 1a_1u. The calculated ionization potentials of the two highest occupied orbitals, 1a_1u and 5a_2u are 5.98 and 6.43 eV, respectively. They are in good agreement with experiments. The role of the porphine macrocycle on the oxidation of Fe is discussed in terms of gross atomic populations and with contour maps of the density difference.     

Syntheses and pharmacological characterization of achiral and chiral enantiopure C/Si/Ge-analogous derivatives of the muscarinic antagonist cycrimine: a study on C/Si/Ge bioisosterism

The C/Si/Ge-analogous compounds rac-Ph(c-C₅H₉)El(CH₂OH)CH₂CH₂NR₂ (NR₂=piperidino; El=C, rac-3a; El=Si, rac-3b; El=Ge, rac-3c) and (c-C₅H₉)₂El(CH₂OH)CH₂CH₂NR₂ (NR₂=piperidino; El=C, 5a; El=Si, 5b; El=Ge, 5c) were prepared in multi-step syntheses. The (R)- and (S)-enantiomers of 3a–c were obtained by resolution of the respective racemates using the antipodes of O,O′-dibenzoyltartaric acid (resolution of rac-3a), O,O′-di-p-toluoyltartaric acid (resolution of rac-3b), or 1,1′-binaphthyl-2,2′-diyl hydrogen phosphate (resolution of rac-3c). The enantiomeric purities of (R)-3a–c and (S)-3a–c were ≥98% ee (determined by ¹H-NMR spectroscopy using a chiral solvating agent). Reaction of rac-3a–c, (R)-3a–c, (S)-3a–c, and 5a–c with methyl iodide gave the corresponding methylammonium iodides rac-4a–c, (R)-4a–c, (S)-4a–c, and 6a–c (3a–c→4a–c; 5a–c→6a–c). The absolute configuration of (S)-3a was determined by a single-crystal X-ray diffraction analysis of its (R,R)-O,O′-dibenzoyltartrate. The absolute configurations of the silicon analog (R)-4b and germanium analog (R)-4c were also determined by single-crystal X-ray diffraction. The chiroptical properties of the (R)- and (S)-enantiomers of 3a–c, 3a–c·HCl, and 4a–c were studied by ORD measurements. In addition, the C/Si/Ge analogs (R)-3a–c, (S)-3a–c, (R)-4a–c, (S)-4a–c, 5a–c, and 6a–c were studied for their affinities at recombinant human muscarinic M₁, M₂, M₃, M₄, and M₅ receptors stably expressed in CHO-K1 cells (radioligand binding experiments with [³H]N-methylscopolamine as the radioligand). For reasons of comparison, the known C/Si/Ge analogs Ph₂El(CH₂OH)CH₂CH₂NR₂ (NR₂=piperidino; El=C, 7a; El=Si, 7b; El=Ge, 7c) and the corresponding methylammonium iodides 8a–c were included in these studies. According to these experiments, all the C/Si/Ge analogs behaved as simple competitive antagonists at M₁–M₅ receptors. The receptor subtype affinities of the individual carbon, silicon, and germanium analogs 3a–8a, 3b–8b, and 3c–8c were similar, indicating a strongly pronounced C/Si/Ge bioisosterism. The (R)-enantiomers (eutomers) of 3a–c and 4a–c exhibited higher affinities (up to 22.4 fold) for M₁–M₅ receptors than their corresponding (S)-antipodes (distomers), the stereoselectivity ratios being higher at M₁, M₃, M₄, and M₅ than at M₂ receptors, and higher for the methylammonium compounds (4a–c) than for the amines (3a–c). With a few exceptions, compounds 5a–c, 6a–c, 7a–c, and 8a–c displayed lower affinities for M₁–M₅ receptors than the related (R)-enantiomers of 3a–c and 4a–c. The stereoselective interaction of the enantiomers of 3a–c and 4a–c with M₁–M₅ receptors is best explained in terms of opposite binding of the phenyl and cyclopentyl ring of the (R)- and (S)-enantiomers. The highest receptor subtype selectivity was observed for the germanium compound (R)-4c at M₁/M₂ receptors (12.9-fold).     

Investigations of electronic transitions and photodissociation of the bromine molecule

The electronic transitions and photodissociation of the bromine molecule were studied in the visible-near UV continuum using dynamic simulation. The molar extinction coefficients in this study were obtained in numerical calculations. The quantum yields of the spin-orbit Br*(² P _1/2) product at different photon frequencies were determined. Time-dependent density functional theory was used to analyze the highest five occupied and lowest five unoccupied Br₂ orbitals. The transition to the ¹Π _u state was found to be most probable in the visible-near UV absorption range.     

Photoelectron spectrum of 9-vinylcarbazole

Conclusions According to photoelectron spectral data, the ₈ and ₇ MO of 9-vinylcarbazole are formed from b₁ and a₂ carbazole orbitals, respectively. This indicates inversion of the order of the highest occupied MO of the five-membered heterocycle in going to the fused structure.Translated from Izvestiya Akademii Nauk SSSR, Seriya Khimicheskaya, No. 8, pp. 1903–1904, August, 1988.     

The electronic absorption spectra of the alkyl-substituted derivatives of bis(benzene)chromium(0) in the vapour phase

The UV and visible absorption spectra of (arene)₂chromium(0) (arene = benzene (I), toluene (II), ethylbenzene (III), cumene (IV), tert-butylbenzene (V), mesitylene (VI) in the vapour phase have been investigated. Four band systems A,B,C and D are revealed in the spectra. The bands of the system with the shortest wavelengths, D, represent the Rydberg series. The first ionisation potentials IP_a1g, 5.18 and 5.01 eV respectively. The Rydberg bands correspond to the allowed electrodipole transitions from the highest occupied molecular orbital (MO) a_1g to the vacant MO of either the a_2u or e_1u type.System C corresponds to the intense band of the solution spectra. The electronic transition e_2g → e_2g obviously makes a great contribution to this system. System B is assigned to the transition from a_1g to vacant a_2u or e_1u MO, which can be Rydberg orbitals. System A can be assigned to the a_1g → e_2u transition or to the Rydberg transition, which is forbidden in the D_6h point group but becomes allowed upon reduction of symmetry.     

Like (CO)4, Do (CS)4 and (CSe)4 Have a Triplet Ground State?

Cyclobutane‐1,2,3,4‐tetraone, (CO)₄, was computationally predicted and, subsequently, experimentally confirmed to have a triplet ground state, in which a b_2g σ MO and an a_2u π MO were each singly occupied. In contrast, the (U)CCSD(T) calculations reported herein found that cyclobutane‐1,2,3,4‐tetrathione, (CS)₄, and cyclobutane‐1,2,3,4‐tetraselenone, (CSe)₄, both had singlet ground states, in which the b_2g σ MO was doubly occupied and the a_2u π MO was empty. Our calculations showed that both the longer C?X distances and smaller coefficients on the carbon atoms in the b_2g and a_2u MOs of (CS)₄ and (CSe)₄ contributed to the difference between the ground states of these two molecules and the ground state of (CO)₄. An experimental test of the prediction of a singlet ground state for (CS)₄ is proposed.     

Theoretical investigation of the interaction between the metal phthalocyanine [MPc]a(M = Sc,Ti, and V; a = –1, 0, and +1) complexes and formaldehyde

Formaldehyde (FA, CH₂O) is one of the toxic volatile organic compounds that cause harmful effects on the human body. In this work, the interaction of FA gas with metal phthalocyanine (MPc) molecules was studied by employing density functional theory calculations. A variety of [MPc]^a (M = Sc, Ti, and V; a = –1, 0, and +1) complexes were studied, and the electronic properties, interaction energies, and charge transfer properties of all of the studied molecules were systematically discussed. Among the studied complexes, the Sc and Ti phthalocyanines were more reactive toward the adsorption of FA gas. Moreover, it was revealed that the interaction of the [ScPc]⁺¹ and [TiPc]⁰ complexes with the CH₂O molecule was stronger, in which the highest occupied molecular orbital (HOMO) and lowest unoccupied molecular orbital (LUMO) energy gap of 46% and 36% decreased after FA adsorption. The results indicated that the MPc-based materials may be a promising candidate for the detection of FA gas.     

ESCA studies of polymers. XIII. Shake-up phenomena in substituted polystyrenes

Shake-up phenomena in a series of para-substituted polystyrenes have been studied by ESCA. Comparison with other spectroscopic data and with theoretical calculations within the sudden approximation, equivalent cores model, and CNDO SCF MO formalism identifies the shake-up structures as arising predominantly from π^*← π transitions involving the highest occupied and lowest unoccupied orbitals of the pendant phenyl groups.     

Covalent nature of the hydrogen bond

Conclusions The main conclusion derived from this work is that the H bond in all three FHF^–, FHFH, and HFHFH⁺ systems is a three-centered, two-electron, covalent chemical bond formed at the expense of 2a _1g (2a ₁) MO bonding. The 1a _1g MO bonding has little effect on H-bond stabilization. Thus the H bond is a one-orbital chemical bond with its formation corresponding, to that of a three-centered MO, as distinguished from molecules bonded by a two-centered MO (e.g., F₂ or HOOH [41]; hence the H bond is much weaker. The uniqueness of the H bond lies in its being the weakest covalent bond. It is precisely the covalent nature of the H bond that gives it its characteristic properties, i.e., saturability and strict compliance to structural requirements. In addition, the low dissociation barrier makes it easy to control the H bond under mild conditions, which is very important in biological systems.Translated from Zhurnal Strukturnoi Khimii, Vol. 26, No. 2, pp. 13–21, March–April, 1985.     

Electronic Properties of Triangle Molybdenum Disulfide (MoS2) Clusters with Different Sizes and Edges

The electronic structures and transition properties of three types of triangle MoS₂ clusters, A (Mo edge passivated with two S atoms), B (Mo edge passivated with one S atom), and C (S edge) have been explored using quantum chemistry methods. The highest occupied molecular orbital (HOMO)–lowest unoccupied molecular orbital (LUMO) gap of B and C is larger than that of A, due to the absence of the dangling of edge S atoms. The frontier orbitals (FMOs) of A can be divided into two categories, edge states from S_3p at the edge and hybrid states of Mo_4d and S_3p covering the whole cluster. Due to edge/corner states appearing in the FMOs of triangle MoS₂ clusters, their absorption spectra show unique characteristics along with the edge structure and size.     

UV, VUV and soft X-ray photoabsorption of dimethyl ether by dipole (e,e) spectroscopies

Absolute UV and VUV photoabsorption oscillator strengths (cross-sections) for the valence shell discrete and continuum regions of dimethyl ether (CH₃OCH₃, DME) have been measured from 5 to 32 eV using high resolution (HR) (0.05 eV f.w.h.m.) dipole (e,e) spectroscopy. A wide-range spectrum, spanning the UV, VUV and soft X-ray regions, from 5 to 200 eV has also been obtained at low resolution (LR) (1 eV f.w.h.m.), and this has been used to determine the absolute oscillator strength scale by employing valence shell Thomas–Reiche–Kuhn (i.e., S(0)) sum-rule normalization. The presently reported HR and LR absolute photoabsorption oscillator strengths are compared with previously published data from direct photoabsorption measurements in those limited energy regions where such data are available. Evaluation of the S(−2) sum using the presently reported absolute differential photoabsorption oscillator strength data gives a static dipole polarizability for dimethyl ether in excellent agreement (within 0.5%) with previously reported polarizability values. Other dipole sums S(u), (u=−1,−3,−4,−5,−6,−8,−10), and logarithmic dipole sums L(u), (u=−1 to −6), are also determined from the presently reported absolute differential photoabsorption oscillator strength data using dipole sum rules.     

A spectral-shift study of the hydrophobic hydration of benzene

A study has been made on the shifts in the spectrum of the S ₁S₀ transition in benzene molecules transferred from low-density vapor to dilute, liquid solutions in order to estimate the geometrical parameter R ^v _1u, characterizing the distribution of the solvent molecules around the solute. The R ^v _1u parameter is a measure of the repulsion between the solution components. Effective radii have been derived for the fluctuation cavities whose existence in the pure solvent is necessary to the dissolution. The free energy, enthalpy, and entropy of the boundary between a solute molecule and the solvent have been derived for aqueous solutions. The energy of the hydrogen bonds in pure water has been estimated.Translated from Teoreticheskaya i Éksperimental'naya Khimiya, Vol. 23, No. 3, pp. 329–339, May–June, 1987.     

Can the highest occupied molecular orbital of the uranyl ion be essentially 5f?

Recent relativistic calculations on the uranyl ion suggest that the low wave numbers of the first electron transfer bands are due to a bonding 5f-like orbital containing the two loosest bound electrons. Comparison with UF₆ makes it more likely that if indeed σ_u (and not π_u) is the highest occupied MO, it is rather due to “pushing from below” by U 6p (like N 2s in N₂).     

Reactions of β-substituted amines-IV: Kinetics and stereochemistry of the thermal to (r) 3-chloro-1-ethylpiperidine,and the stereo-chemical course of their reactions with nucleophiles

The rate of the thermal rearrangement of (S) 2 chloromethyl-1-ethylpyrrolidine [(S)-1a] to (R)-3-chloro-1-ethylpiperidine [(R) 2a] has been examined at three temperatures in benzene by PMR and polarimetry. The rearrangement was shown to be completely stereospecific and to obey a simple first order rate law. The calculated E_a ΔH3 and ΔS3 were 22 ± 2 $\text{kcal}\text{mole}$ (25°), 21 ± 2.5 $\text{kcal}\text{mole}$ (25°) and - 10 ± 2 e.u. (0°K) respectively. The effect of solvents having differing dielectric constants was also studied. A transition state 9'a and an ion pair intermediate 3a are suggested for the rearrangement. The stereochemical course of the reactions of (S)-1a, (R)-2a and (S)-2a with hydroxide and methoxide ions have been shown to be 100% stereospecific with an uncertainty of about 1%. The absolute configurations of all optically active reactants and products [(S)- and (R)-4a, (S)-4b (R)- and (S)-5a, (R)-5b, (S,S')-6a, (S,R')-7a and (R,R')-8a] were established by chemical correlations with known compounds or by ORD and chemical inference. The ring opening of both the primary and secondary aziridinium ion positions of 1-azonia-1-ethylbicyclo [3.1.0]hexane [(S)-3a] by nucleophiles proceeds entirely by S_N2 processes. The conversion of (R)-1-ethyl-3-hydroxypiperidine [(R)-5a] to (S)-2a. HCl with thionyl chloride in chloroform proceeds by inversion with 4.8% racemization, whereas the thermal rearrangement of (S)-1a to (R)-2a occurs with complete retention of absolute configuration.     

Rhenium octahedral clusters: the systems Re-S-Br and M-Re-S-Br (M = Na, K, RB, Cs)

The quaternary systems M-Re-S-Br (M = Na, K, Rb, Cs) have been investigated in the domains of composition which are expected to lead to the formation of Re₆ octahedral cluster based compounds. A number of compounds have been obtained. They include the ternaries Re₆S_4+xBr_10−2x (integer x = 0–4) among them crystal data are reported for Re₆S₄Br₁₀ and Re₆S₅Br₈. Various quaternaries are also presented. Most of them are built from the ¦Re₆S_4+nBr_10−n¦ⁿ⁻ anionic units (n = 1–4) stacked in various compounds and solid solutions, the structure of which strongly depends on the number and size of counter cations.     

On the nature of the first excited states of the uranyl ion

Results of calculations on the uranylion using the LCAO MO Hartree—Fock—Slater method including relativistic effects are reported. The highest occupied molecular orbital is calculated to be σ_u, consisting predominantly of U 5f character. The σ_u orbital is the HOMO partly because of “pushing-from-below” by the U 6p orbital, but also as a result of the change in potential of the U 5f electrons with the uranium core elections brought about by relativistic contraction of the core electrons. This effect also determines the character of the first virtual levels (δ_u and Φ_u, respectively) in equatorial ligand fields.     

β-Substituted copper porphyrin cations: A2u or A1u radicals?

DFT calculations have been performed on a series of β-substituted copper porphyrins, CuP–X, with particular regard to substituent effects upon the relative energies of two frontier occupied, nearly degenerate a_2u and a_1u orbitals. Substitution by electron-withdrawing groups only slightly enlarges the a_2u–a_1u separation of CuP. Electron-donating groups CH₂OH and OCH₃ raise the energies of a_2u and a_1u uniformly. In contrast, SH and NH₂ reverse the normal ordering; these [CuP–X]⁺ cation radicals are mainly a_1u in character. Electronic structures of CuP derivatives substituted at all eight β-pyrrole positions are also examined.     

Self-consistent-field-Xα-scattered-wave molecular orbital calculation of [CpMoS(μ-S)]2, a molecule that undergoes a photochemically induced isomerization

A self-consistent-field-Xα-scattered-wave molecular orbital calculation was carried out on the [CpMoS(μ-S)]₂(Cp = η⁵-C₅H₅) complex. The calculated results were used to rationalize the observed photochemical isomerization of the title complex to [CpMo(μ-S)][μ-S₂]. It is proposed that a terminal sulfur (S_t) → Mo charge-transfer excitation is responsible for the isomerization, which is an intramolecular redox; i.e. Mo(V) is reduced to Mo(IV) and S²⁻ is oxidized to S₂²⁻ , a result consistent with the charge-transfer character of the excitation. Specifically, the transition responsible for the isomerization is proposed to be 16b_u → 18a_g (¹A_g → ¹B_u). The 18a_g orbital is primarily Mo in character but it is also Mo---S_t π-antibonding; cleavage of the Mo---S_t π-bond facilitates the isomerization.     

A Quantum-Chemical Study on the Photochemical Properties of Azides of a Series of Heteroarenes from Pyridine to Dibenzoacridine in Neutral and Protonated Forms

Molecules of a series of heteroaromatic azides in the ground (S ₀) and the lowest excited singlet (S ₁) states were calculated by the PM3 semiempirical method. It was shown that in the S ₀ state, the azide group in all the azides has quasi-linear geometry and a significant positive charge on the two terminal nitrogen atoms. The azide photoactivity is determined by the population of the σ _NN ^* orbital in the excited state, which is unoccupied in the ground state. The population of this orbital was found to depend on the size and charge of the aromatic π system. For the initial members of this azide series, the σ _NN ^* orbital is populated in both neutral and protonated forms. This is consistent with the experimental data and means that these azides are photoactive. With an increase in the size of the aromatic system, the energetic gap between the σ _NN ^* orbital and LUMO increases. As a result, the σ _NN ^* orbital is not populated in the S ₁ state when a particular threshold size of the π system is achieved, and the azide becomes photo-inactive.__________Translated from Khimiya Vysokikh Energii, Vol. 39, No. 4, 2005, pp. 259–266.Original Russian Text Copyright © 2005 by Budyka, Oshkin.