De novo peptide sequencing by tandem MS using complementary CID and electron transfer dissociation

De novo sequencing of peptides using tandem MS is difficult due to missing fragment ions in the spectra commonly obtained after CID of peptide precursor ions. Complementing CID spectra with spectra obtained in an ion‐trap mass spectrometer upon electron transfer dissociation (ETD) significantly increases the sequence coverage with diagnostic ions. In the de novo sequencing algorithm CompNovo presented here, a divide‐and‐conquer approach was combined with an efficient mass decomposition algorithm to exploit the complementary information contained in CID and ETD spectra. After optimizing the parameters for the algorithm on a well‐defined training data set obtained for peptides from nine known proteins, the CompNovo algorithm was applied to the de novo sequencing of peptides derived from a whole protein extract of Sorangium cellulosum bacteria. To 2406 pairs of CID and ETD spectra contained in this data set, 675 fully correct sequences were assigned, which represent a success rate of 28.1%. It is shown that the CompNovo algorithm yields significantly improved sequencing accuracy as compared with published approaches using only CID spectra or combined CID and ETD spectra.     

Pillared and open-framework uranyl diphosphonates

The hydrothermal reactions of uranium trioxide, uranyl acetate, or uranyl nitrate with 1,4-benzenebisphosphonic acid in the presence of very small amount of HF at 200 °C results in the formation of three different uranyl diphosphonate compounds, [H₃O]₂{(UO₂)₆[C₆H₄(PO₃)(PO₂OH)]₂[C₆H₄(PO₂OH)₂]₂[C₆H₄(PO₃)₂]}(H₂O)₂ (Ubbp-1), [H₃O]₄{(UO₂)₄[C₆H₄(PO₃)₂]₂F₄}·H₂O (Ubbp-2), and {(UO₂)[C₆H₂F₂(PO₂OH)₂(H₂O)}₂·H₂O (Ubbp-3). The crystal structures of these compounds were determined by single crystal X-ray diffraction experiments. Ubbp-1 consists of UO₇ pentagonal bipyramids that are bridged by the phosphonate moieties to form a three-dimensional pillared structure. Ubbp-2 is composed of UO₅F₂ pentagonal bipyramids that are bridged through the phosphonate oxygen atoms into one-dimensional chains that are cross-linked by the phenyl spacers into a pillared structure. The structure of Ubbp-3 is a three-dimensional open-framework with large channels containing water molecules with internal dimensions of approximately 10.9×10.9 Å. Ubbp-1 and Ubbp-2 fluoresce at room temperature.     

Di-2-pyridyl ketone in actinide chemistry: Dinuclear uranyl complexes

Treatment of UO₂X₂ (X = OAc, Cl, NO₃) with 1 mol equiv of (py)₂CO in THF afforded the adducts [UO₂X₂{(py)₂CO}] in almost quantitative yields. The same reactions in MeOH, in the presence of NEt₃ for X = Cl and NO₃, gave yellow crystals of [(UO₂X)₂{μ-(py)₂C(OMe)O}₂]·MeOH (X = OAc, 1·MeOH and X = Cl, 2·MeOH) and [{UO₂(NO₃)}₂{μ-(py)₂C(OMe)O}₂] (3). Reactions of UO₂X₂ (X = OAc, Cl) with 2 mol equiv of (py)₂CO and NEt₃ in MeOH or further treatment of 1 and 2 with 1 mol equiv of (py)₂CO and NEt₃ afforded the methoxide derivative [{UO₂(OMe)}₂{μ-(py)₂C(OMe)O}₂] (4), while UO₂(NO₃)₂ was transformed into [{UO₂(NO₃)}{UO₂(OH)}{μ-(py)₂C(OMe)O}₂] (5). In these first structurally characterized actinide compounds with a (py)₂CO-based ligand, the uranium atoms are located at the center of pentagonal (X = Cl and OMe) or hexagonal (X = OAc and NO₃) bipyramids sharing one edge defined by the μ-alkoxo oxygen atoms. Crystals of [{UO₂(OMe)}₂{μ-(py)₂C(OMe)O}₂]·[(UO₂)₄{μ₂-(py)₂C(OMe)O}₂(μ₂-OAc)₂(μ₃-O)₂(MeOH)₂]·H₂O (6·H₂O) were serendipitously obtained in one experiment with [UO₂(OAc)₂(H₂O)₂] and (py)₂CO.     

Quantum relativistic investigation about the coordination and bonding effects of different ligands on uranyl complexes

The coordination and bonding effects of equatorial ligands such as fluoride (F⁻), chloride (Cl⁻), cyanide (CN⁻), isocyanide (NC⁻), and carbonate (CO₃⁻²) on uranyl dication (UO₂²⁺) has been studied using relativistic density functional theory. The ZORA Hamiltonian was applied for the inclusion of relativistic effects taking into account all the electrons for the optimization and the explicit inclusion of spin–orbit coupling effects. Geometry optimizations including the counterions and frequencies analysis were carried out with PW91 and PBE functional. Solvents effects were considered by using the conductor like screening model (COSMO) for water and acetonitrile. The Time-Dependent Density Functional Theory (TDDFT) was used to calculate the excitation energies with GGA SAOP functional and the electronic transitions were analyzed using double group irreducible representations. The theoretical results are in a good agreement with experimental IR, Raman and EXAFS spectra and previous theoretical results. New information about the effect of different (donor and acceptors) ligands on the bonding of uranyl ion and on the electronic transitions involved in these complexes is provided with a possible impact on the understanding of the uranyl coordination chemistry.     

Electron transfer dissociation versus collisionally activated dissociation of cationized biodegradable polyesters

Biodegradable polyesters were ionized by electrospray ionization and characterized by tandem mass spectrometry using collisionally activated dissociation (CAD) and electron transfer dissociation (ETD) as activation methods. The compounds studied include one homopolymer, polylactide and two copolymers, poly(ethylene adipate) and poly(butylene adipate). CAD of [M+2Na]²⁺ ions from these polyesters proceeds via charge‐remote 1,5‐H rearrangements over the ester groups, leading to cleavages at the (CO)O–alkyl bonds. ETD of the same precursor ions creates a radical anion at the site of electron attachment, which fragments by radical‐induced cleavage of the (CO)O–alkyl bonds and by intramolecular nucleophilic substitution at the (CO)–O bonds. In contrast to CAD, ETD produces fragments in one charge state only and does not cause consecutive fragmentations, which simplifies spectral interpretation and permits conclusive identification of the correct end groups. The radical‐site reactions occurring during ETD are very similar with those reported for ETD of protonated peptides. Unlike multiply protonated species, multiply sodiated precursors form ion pairs (salt bridges) after electron transfer, thereby promoting dissociations via nucleophilic displacement in addition to the radical‐site dissociations typical in ETD. Copyright © 2012 John Wiley & Sons, Ltd.     

Gas-phase coordination complexes of dipositive plutonyl, PuO2(2+): chemical diversity across the actinyl series

We report the first transmission of solvent-coordinated dipositive plutonyl ion, Pu(VI)O(2)(2+), from solution to the gas phase by electrospray ionization (ESI) of plutonyl solutions in water/acetone and water/acetonitrile. ESI of plutonyl and uranyl solutions produced the isolable gas-phase complexes, [An(VI)O(2)(CH(3)COCH(3))(4,5,6)](2+), [An(VI)O(2)(CH(3)COCH(3))(3)(H(2)O)](2+), and [An(VI)O(2)(CH(3)CN)(4)](2+); additional complex compositions were observed for uranyl. In accord with relative actinyl stabilities, U(VI)O(2)(2+) > Pu(VI)O(2)(2+) > Np(VI)O(2)(2+), the yields of plutonyl complexes were about an order of magnitude less than those of uranyl, and dipositive neptunyl complexes were not observed. Collision-induced dissociation (CID) of the dipositive coordination complexes in a quadrupole ion trap produced doubly- and singly-charged fragment ions; the fragmentation products reveal differences in underlying chemistries of plutonyl and uranyl, including the lower stability of Pu(VI) as compared with U(VI). Particularly notable was the distinctive CID fragment ion, [Pu(IV)(OH)(3)](+) from [Pu(VI)O(2)(CH(3)COCH(3))(6)](2+), where the plutonyl structure has been disrupted and the tetravalent plutonium hydroxide produced; this process was not observed for uranyl.     

Dioxouranium Complexes with Acetylpyridine Benzoylhydrazones and Related Ligands

Acetylpyridine benzoylhydrazone and related ligands react with common dioxouranium(VI) compounds such as uranyl nitrate or [NBu₄]₂[UO₂Cl₄] to form air‐stable complexes. Reactions with 2, 6‐diacetylpyridinebis(benzoylhydrazone) (H₂L^1a) or 2, 6‐diacetylpyridinebis(salicylhydrazone) (H₂L^1b) give yellow products of the composition [UO₂(L¹)]. The neutral compounds contain doubly deprotonated ligands and possess a distorted pentagonal‐bipyramidal structure. The hydroxo groups of the salicylhydrazonato ligand do not contribute to the complexation of the metal. The equatorial coordination spheres of the complexes can be extended by the addition of a monodentate ligand such as pyridine or DMSO. The uranium atoms in the resulting deep‐red complexes have hexagonal‐bipyramidal coordination environments with the oxo ligands in axial positions. The sterical strains inside the hexagonal plane can be reduced when two tridentate benzoylhydrazonato ligands are used instead of the pentadentate 2, 6‐diacetylpyridine derivatives. Acetylpyridine benzoylhydrazone (HL²) and bis(2‐pyridyl)ketone benzoylhydrazone (HL³) deprotonate and form neutral, red [UO₂(L)₂] complexes. The equatorial coordination spheres of these complexes are puckered hexagons. X‐ray diffraction studies on [UO₂(L^1a)(pyridine)], [UO₂(L^1b)(DMSO)], [UO₂(L²)₂] and [UO₂(L³)₂] show relatively short U—O bonds to the benzoylic oxygen atoms between 2.328(6) and 2.389(8) Å. This suggests a preference of these donor sites of the ligands over their imino and amine functionalities (U—N bond lengths: 2.588(7)—2.701(6) Å ).     

Syntheses, structures, characterizations and charge-density matching of novel amino-templated uranyl selenates

Five hybrid organic-inorganic uranyl selenates have been synthesized, characterized and their structures have been determined. The structure of (C₂H₈N)₂[(UO₂)₂(SeO₄)₃(H₂O)] (EthylAUSe) is monoclinic, P2₁, a=8.290(1), b=12.349(2), c=11.038(2) Å, β=104.439(4)°, V=1094.3(3) Å³, Z=2, R₁=0.0425. The structure of (C₇H₁₀N)₂[(UO₂)(SeO₄)₂(H₂O)]H₂O (BenzylAUSe) is orthorhombic, Pna2₁, a=24.221(2), b=11.917(1), c=7.4528(7) Å, V=2151.1(3) Å³, Z=4, R₁=0.0307. The structure of (C₂H₁₀N₂)[(UO₂)(SeO₄)₂(H₂O)](H₂O)₂ (EDAUSe) is monoclinic, P2₁/c, a=11.677(2), b=7.908(1), c=15.698(2) Å, β=98.813(3)°, V=1432.4(3) Å³, Z=4, R₁=0.0371. The structure of (C₆H₂₂N₄)[(UO₂)(SeO₄)₂(H₂O)](H₂O) (TETAUSe) is monoclinic, P2₁/n, a=13.002(2), b=7.962(1), c=14.754(2) Å, β=114.077(2)°, V=1394.5(3) Å³, Z=4, R₁=0.0323. The structure of (C₆H₂₁N₄)[(UO₂)(SeO₄)₂(HSeO₄)] (TAEAUSe) is monoclinic, P2₁/m, a=9.2218(6), b=12.2768(9), c=9.4464(7) Å, β=116.1650(10)°, V=959.88(12) Å³, Z=2, R₁=0.0322. The inorganic structural units in these compounds are composed of uranyl pentagonal bipyramids and selenate tetrahedra. In each case, tetrahedra link bipyramids through vertex-sharing, resulting in chain or sheet topologies. The charge-density matching principle is discussed relative to the orientations of the organic molecules between the inorganic structural units.     

Syntheses and structures of three disulfoxide uranyl complexes

Three disulfoxide uranyl complexes [UO₂(DBSOB)(NO₃)₂] _n (1), [UO₂(DBM)₂]₂(DBSOB) (2), and [UO₂(PMBP)₂]₂(DBSOB) (3) (DBSOB = 1,4-di(butylsulfinyl)butane, HDBM = dibenzoylmethane, HPMBP = 1-phenyl-3-methyl-4-benzoyl-5-pyrazolone) were synthesized and characterized. The [UO₂(NO₃)₂] groups are connected by bridging disulfoxide ligands DBSOB to form a 1-D zigzag chain in 1. Two [UO₂(DBM)₂] or [UO₂(PMBP)₂] groups are connected by a bridging DBSOB to form the dimeric structures of 2 or 3, respectively. Complexes 1, 2, and 3 are the first structurally characterized disulfoxide–actinide compounds. Thermal stabilities of 1, 2, and 3 were investigated.     

A review of electron-capture and electron-transfer dissociation tandem mass spectrometry in polymer chemistry

Mass spectrometry (MS)-based studies of synthetic polymers often characterise detected polymer components using mass data alone. However when mass-based characterisations are ambiguous, tandem MS (MS/MS) offers a means by which additional analytical information may be collected. This review provides a synopsis of two particularly promising methods of dissociating polymer ions during MS/MS: electron-capture and electron-transfer dissociation (ECD and ETD, respectively). The article opens with a summary of the basic characteristics and operating principles of ECD and ETD, and relates these techniques to other methods of dissociating gas-phase ions, such as collision-induced dissociation (CID). Insights into ECD- and ETD-based MS/MS, gained from studies into proteins and peptides, are then discussed in relation to polymer chemistry. Finally, ECD- and ETD-based studies into various classes of polymer are summarised; for each polymer class, ECD- and ETD-derived data are compared to CID-derived data. These discussions identify ECD and ETD as powerful means by which unique and diagnostically useful polymer ion fragmentation data may be generated, and techniques worthy of increased utilisation by the polymer chemistry community.     

New one-dimensional uranyl and neptunyl iodates: crystal structures of K3[(UO2)2(IO3)6](IO3)·H2O and K[NpO2(IO3)3]·1.5H2O

The uranyl and neptunyl(VI) iodates, K₃[(UO₂)₂(IO₃)₆](IO₃)·H₂O (1) and K[NpO₂(IO₃)₃]·1.5H₂O (2), have been prepared and crystallized under mild hydrothermal conditions. The structures of 1 and 2 both contain one-dimensional _∞¹[AnO₂(IO₃)₃]¹⁻(An=U,Np) ribbons that consist of approximately linear actinyl(VI) cations bound by iodate anions to yield AnO₇ pentagonal bipyramids. The AnO₇ units are linked by bridging iodate anions to yield chains that are in turn coupled by additional iodate anions to yield ribbons. The edges of the ribbons are terminated by monodentate iodate anions. For 1 and 2, K⁺ cations and water molecules separate the ribbons from one another. In addition, isolated iodate anions are also found between _∞¹[UO₂(IO₃)₃]¹⁻ ribbons in 1. In order to aid in the assignment of oxidation states in neptunyl containing compounds, a bond-valence sum parameter of 2.018 Å for Np(VI) bound exclusively to oxygen has been developed with b=0.37 Å. Crystallographic data (193 K, MoKα, λ=0.71073): 1, triclinic, , a=7.0609(4) Å, b=14.5686(8)  Å, c=14.7047(8)  Å, α=119.547(1)°, β=95.256(1)°, γ=93.206(1)°, Z=2, R(F)=2.49% for 353 parameters with 6414 reflections with I>2σ(I); (203 K, MoKα, λ=0.71073): 2, monoclinic, P2₁/c, a=7.796(4)  Å, b=7.151(3)  Å, c=21.79(1)  Å, β=97.399(7)°, Z=4, R(F)=6.33% for 183 parameters with 2451 reflections with I>2σ(I).     

Structures and syntheses of layered and framework amine-bearing uranyl phosphate and uranyl arsenates

Two hydrated uranyl arsenates and a uranyl phosphate were synthesized by hydrothermal methods in the presence of amine structure-directing agents and their structures determined: (N₂C₆H₁₄)[(UO₂)(AsO₄)]₂(H₂O)₃, DabcoUAs, {NH(C₂H₅)₃}[(UO₂)₂(AsO₄)(AsO₃OH)], TriethUAs, and (N₂C₄H₁₂)(UO₂)[(UO₂)(PO₄)]₄(H₂O)₂, PiperUP. Intensity data were collected at room temperature using MoKα X-radiation and a CCD-based area detector. The crystal structures were refined by full-matrix least-squares techniques on the basis of F² to agreement indices (DabcoUAs, TriethUAs, PiperUP) wR₂=5.6%, 8.3%, 7.2% for all data, and R₁=2.9%, 3.3%, 4.0%, calculated for 1777, 5822, 9119 unique observed reflections (|F_o|?4σ_F), respectively. DabcoUAs is monoclinic, space group C2/m, Z=2, a=18.581(1), b=7.1897(4), c=7.1909(4) Å, β=102.886(1)°, V=936.43(9) Å³, D_calc=3.50 g/cm³. TriethUAs is monoclinic, space group P2₁/n, Z=4, a=9.6359(4), b=18.4678(7), c=10.0708(4) Å, β=92.282(1)°, V=1790.7(1) Å³, D_calc=3.41 g/cm³. PiperUP is monoclinic, space group Pn, Z=2, a=9.3278(4), b=15.5529(7), c=9.6474(5) Å, β=93.266(1)°, V=1397.3(1) Å³, D_calc=4.41 g/cm³. The structure of DabcoUAs contains the autunite-type sheet formed by the sharing of vertices between uranyl square bipyramids and arsenate tetrahedra. The triethylenediammonium cations are located in the interlayer along with two H₂O groups and are disordered. Both TriethUAs and PiperUP contain sheets formed of uranyl pentagonal bipyramids and tetrahedra (arsenate and phosphate, respectively) with the uranophane sheet-anion topology. In TriethUAs, triethlyammonium cations are located in the interlayer. In PiperUP, the sheets are connected by a uranyl pentagonal bipyramid that shares corners with phosphate tetrahedra of adjacent sheets, resulting in a framework with piperazinium cations and H₂O groups in the cavities of the structure.     

Structural and thermal characterization of cerium, thorium and uranyl complexes of sulfasalazine

Cerium(IV), Thorium(IV) and Uranyl(II) complexes with the ammonium salt of sulfasalazine drug (H2SSZ, HL-) have been studied. The structures of the complexes were elucidated using elemental analysis, IR and mass spectroscopy and thermal analysis. The complexes were isolated in 1:1 and 1:2 (M:L) ratios. The solid monocomplexes (1:1) (M:H(2)SSZ) were isolated in the general formulae [UO2(L)(H2O)2].2H2O and [M(L)(X)z(H2O)n].yH2O (M=Ce(IV) and Th(IV) (X=NO3, z=2, n=2, y=0-3)). The biscomplexes (1:2) (M:H2SSZ) solid chelates found to have the general formulae [UO2(HL)2].2H2O and [M(L)2(H2O)2] (M=Ce(IV) and Th(IV)). The thermal decomposition of the complexes should be discussed in relation to structure, and the thermodynamic parameters of the decomposition stages were evaluated applying Coats-Redfern and Horwitz-Mitzger methods.     

Aminoalkylbis(phenolate) [O,N,O] donor ligands for uranyl(VI) ion coordination: Syntheses,structures, and extraction studies

The syntheses of five new aminoalkylbis(phenolate) ligands (as hydrochlorides) and their uranyl complexes are described. The reaction between uranyl nitrate hexahydrate and phenolic ligand [(N,N-bis(2-hydroxy-5-tert-butyl-3-methylbenzyl)-1-aminopropane) · HCl], H₂L1 · HCl, forms a uranyl complex [UO₂(HL1)₂] · 2CH₃CN (1). The ligand [(N,N-bis(2-hydroxy-5-tert-butyl-3-methylbenzyl)-1-aminobutane) · HCl], H₂L2 · HCl, forms a uranyl complex with a formula [UO₂(HL2)₂] · 2CH₃CN (2). The ligand [(N,N-bis(2-hydroxy-5-tert-butyl-3-methyl benzyl)-1-aminohexane) · HCl], H₂L3 · HCl, yields a uranyl complex with a formula [UO₂(HL3)₂] · 2CH₃CN (3) and the ligand [(N,N-bis(2-hydroxy-5-tert-butyl-3-methylbenzyl)-cyclohexylamine) · HCl], H₂L4 · HCl, yields a uranyl complex with a formula [UO₂(HL4)₂] (4). The ligand [(N,N-bis(2-hydroxy-5-tert-butyl-3-methylbenzyl)-benzylamine) · HCl], H₂L5 · HCl, forms a uranyl complex with a formula [UO₂(HL5)₂] · 2MeOH (5). The molecular structures of 1, 2′ (2 without methanol), 3, 4 and 5 were verified by X-ray crystallography. The complexes 1–5 are neutral zwitterions which form in a molar ratio of 1:2 (U to L) in the presence of a base (triethylamine) and bear similar mononuclear, distorted octahedral uranyl structures with the four coordinating phenoxo ligands forming an equatorial plane and resulting in a centrosymmetric structure for the uranyl ion. In uranyl ion extraction studies from water to dichloromethane with ligands H₂L1 · HCl–H₂L5 · HCl, the ligands H₂L2 · HCl and H₂L4 · HCl are the most effective ones.     

Comparison of CID,ETD and metastable atom‐activated dissociation (MAD) of doubly and triply charged phosphorylated tau peptides

The fragmentation behavior of the 2+ and 3+ charge states of eleven different phosphorylated tau peptides was studied using collision‐induced dissociation (CID), electron transfer dissociation (ETD) and metastable atom‐activated dissociation (MAD). The synthetic peptides studied contain up to two known phosphorylation sites on serine or threonine residues, at least two basic residues, and between four and eight potential sites of phosphorylation. CID produced mainly b‐/y‐type ions with abundant neutral losses of the phosphorylation modification. ETD produced c‐/z‐type ions in highest abundance but also showed numerous y‐type ions at a frequency about 50% that of the z‐type ions. The major peaks observed in the ETD spectra correspond to the charge‐reduced product ions and small neutral losses from the charge‐reduced peaks. ETD of the 2+ charge state of each peptide generally produced fewer backbone cleavages than the 3+ charge state, consistent with previous reports. Regardless of charge state, MAD achieved more extensive backbone cleavage than CID or ETD, while retaining the modification(s) in most cases. In all but one case, unambiguous modification site determination was achieved with MAD. MAD produced 15–20% better sequence coverage than CID and ETD for both the 2+ and 3+ charge states and very different fragmentation products indicating that the mechanism of fragmentation in MAD is unique and complementary to CID and ETD. Copyright © 2012 John Wiley & Sons, Ltd.     

Redox energetics and kinetics of uranyl coordination complexes in aqueous solution

Detailed voltammetric results for five uranyl coordination complexes are presented and analyzed using digital simulations of the voltammetric data to extract thermodynamic (E(1/2)) and heterogeneous electron-transfer kinetic (k(0) and alpha) parameters for the one-electron reduction of UO(2)(2+) to UO(2)(+). The complexes and their corresponding electrochemical parameters are the following: [UO(2)(OH(2))(5)](2+) (E(1/2) = -0.169 V vs Ag/AgCl, k(0) = 9.0 x 10(-3) cm/s, and alpha = 0.50); [UO(2)(OH)(5)](3-) (-0.927 V, 2.8 x 10(-3) cm/s, 0.46); [UO(2)(C(2)H(3)O(2))(3)](-) (-0.396 V, approximately 0.1 cm/s, approximately 0.5); [UO(2)(CO(3))(3)](4-) (-0.820 V, 2.6 x 10(-5) cm/s, 0.41); [UO(2)Cl(4)](2-) (-0.065 V, 9.2 x 10(-3) cm/s, 0.30). Differences in the E(1/2) values are attributable principally to differences in the basicity of the equatorial ligands. Differences in rate constants are considered within the context of Marcus theory of electron transfer, but no specific structural change(s) in the complexes between the two oxidation states can be uniquely identified with the underlying variability in the heterogeneous rate constants and electron-transfer coefficients.     

Effects of transition metal ion coordination on the collision-induced dissociation of polyalanines

Transition metal-polyalanine complexes were analyzed in a high-capacity quadrupole ion trap after electrospray ionization. Polyalanines have no polar amino acid side chains to coordinate metal ions, thus allowing the effects metal ion interaction with the peptide backbone to be explored. Positive mode mass spectra produced from peptides mixed with salts of the first row transition metals Cr(III), Fe(II), Fe(III), Co(II), Ni(II), Cu(I), and Cu(II) yield singly and doubly charged metallated ions. These precursor ions undergo collision-induced dissociation (CID) to give almost exclusively metallated N-terminal product ions whose types and relative abundances depend on the identity of the transition metal. For example, Cr(III)-cationized peptides yield CID spectra that are complex and have several neutral losses, whereas Fe(III)-cationized peptides dissociate to give intense non-metallated products. The addition of Cu(II) shows the most promise for sequencing. Spectra obtained from the CID of singly and doubly charged Cu-heptaalanine ions, [M + Cu - H](+) and [M + Cu](2+) , are complimentary and together provide cleavage at every residue and no neutral losses. (This contrasts with [M + H](+) of heptaalanine, where CID does not provide backbone ions to sequence the first three residues.) Transition metal cationization produces abundant metallated a-ions by CID, unlike protonated peptides that produce primarily b- and y-ions. The prominence of metallated a-ions is interesting because they do not always form from b-ions. Tandem mass spectrometry on metallated (Met = metal) a- and b-ions indicate that [b(n) + Met - H](2+) lose CO to form [a(n) + Met - H](2+), mimicking protonated structures. In contrast, [a(n) + Met - H](2+) eliminate an amino acid residue to form [a(n-1) + Met - H](2+), which may be useful in sequencing.     

Rapid radiochemical method for determination of actinides in emergency concrete and brick samples

A new rapid method for the determination of actinides in emergency concrete and brick samples has been developed at the Savannah River Site Environmental Lab (Aiken, SC, USA) that can be used in emergency response situations or for routine analysis. If a radiological dispersive device (RDD), Improvised Nuclear Device (IND) or nuclear accident occurs, there will be a urgent need for rapid analyses of many different environmental matrices, including building materials such as concrete and brick, to support dose mitigation and environmental clean-up. The new method for actinides in concrete and brick method utilizes a rapid sodium hydroxide fusion method, a lanthanum fluoride matrix removal step, and a column separation process with stacked TEVA, TRU and DGA Resin cartridges. Alpha emitters are prepared using rare earth microprecipitation for counting by alpha spectrometry. The method showed high chemical recoveries and effective removal of interferences. The determination of actinides in concrete and brick sample analysis can be performed in less than 8 h with excellent quality for emergency samples. The rapid fusion technique is a rugged sample digestion method that ensures that any refractory actinide particles are effectively digested.     

Ylidene-->iminophosphine coordination complexes and reversible dissociation of dichlorophosphetidines

Chloro-, bromo-, iodo-, and trifluoromethylsulfonyloxy-(2,4,6-tri-tert-butylphenylimino)phosphines (MesNPX; X = Cl, Br, I, OTf) react quantitatively with 1,3-diisopropyl-4,5-dimethylimidazol-2-ylidene (Im) to give Lewis acid-base complexes with the general formula MesNP(Im)X. The dichlorophosphetidine (DippNPCl)(2) (Dipp = 2,6-diisopropylphenyl) represents a formal cyclodimer of an iminophosphine and reacts with Im to give a similar complex. The process represents a ligand induced dissociation of the phosphetidine framework and is reversed by the introduction of an appropriate Lewis acid. Solid state structures of RNP(Im)X complexes show that the closest contact between acid and base occurs between phosphorus and carbon in all cases, highlighting them as compounds that contain examples of C-->P coordinate bonds. Association of Im with phosphorus also effects a substantial increase in the P-X distance, but all derivatives maintain a short NP bond, indicating the presence of NP pi-bonding.     

Synthesis, spectroscopic and structural properties of uranyl complexes based on bipyridine N-oxide ligands

By using 2,2′-bipyridine N-oxide (bipyO) and 2,2′-bipyridine N,N′-dioxide (bipyO₂), three new uranyl complexes [UO₂(bipyO)SO₄]·H₂O (1), [UO₂(bipyO)(OH)(NO₃)]₂·H₂O (2) and [UO₂(bipyO₂)H₂O](ClO₄)₂·(3) were synthesized using uranyl salts including non-coordinating or weakly coordinating power of the ClO₄⁻ anion and the strongly coordinating power of NO₃⁻ and SO₄²⁻ anions. All of the compounds were characterized by CHN microanalytical procedures, infrared and luminescence spectroscopy and by single crystal X-ray diffraction. Spectroscopic studies indicate that the bipyO is bound to the uranyl group via the nitrogen and oxygen atoms. Structural analyses revealed that overall bonding pattern is different in each case: 1 is a polymer; in 2 dimeric complex molecules are formed, whereas 3 is composed of monomers. In all of the complexes, the uranium atom is in a seven-coordinate environment.