Molecular fragmentations: Part VI. Structures and energies of the valence isomers of benzene,and their molecular cations and anions

Molecular structures and energies have been calculated, in the MINDO/3 approximation, for neutral singlets and triplets, and for molecular cations and anions of benzene and seven of its valence isomers.     

Degradation of ionized OV(OCH3)3 in the gas phase. From the neutral compound all the way down to the quasi-terminal fragments VO+ and VOH+

The consecutive fragmentation of ionized trimethyl vanadate(V), OV(OCH3)3 (1), is examined by experiment and theory. After an elimination of formaldehyde from the molecular ion 1+, subsequent dissociations proceed via losses of first H2 and then two molecules of formaldehyde to finally yield the VOH+ cation; these redox reactions involve the V(II)/V(IV) manifold. At elevated energies, expulsion of CH3O* from 1+ can efficiently compete to afford OV(OCH3)2+, a formal V(V) compound, from which subsequent losses of H2 and two units of CH2O lead to bare VO+, thereby exploring the V(III)/V(V) redox manifold. Experiments using complementary mass spectrometric techniques, i.e., neutralization-reionization experiments and ion/molecule reactions, in conjunction with extensive computational studies provide deep insight into the ion structures and the relative energetics of these dissociation reactions. In particular, a quantitative energetic scheme is obtained that ranges from neutral OV(OCH3)3 all the way down to the quasi-terminal fragment ions VOH+ and VO+, respectively.     

Unimolecular chemistry of oxazole and isoxazole radical cations in the gas phase: Combined experimental and molecular orbital study

Molecular radical cations of oxazole (1) and isoxazole (2) dissociate by losing carbon monoxide or a hydrogen atom, respectively. These fragmentations were examined by use of tandem mass spectrometry, flash vacuum pyrolysis and ab initiomolecular orbital calculations. A multi-step mechanism is proposed which incorporates these new experimental and theoretical data. The case of methylated homologues of 1 and 2 is also considered.     

Structures and fragmentations of cobalt(II)-cysteine complexes in the gas phase

The electronebulization of a cobalt(II)/cysteine(Cys) mixture in water/methanol (50/50) produced mainly cobalt-cationized species. Three main groups of the Co-cationized species can be distinguished in the ESI-MS spectrum: (1) the cobalt complexes including the cysteine amino acid only (they can be singly charged, for example, [Co(Cys)n- H]+ with n = 1-3 or doubly charged such as [Co + (Cys)2]2+); (2) the cobalt complexes with methanol: [Co(CH3OH)n- H]+ with n = 1-3, [Co(CH3OH)4]2+; and (3) the complexes with the two different types of ligands: [Co(Cys)(CH3OH) - H]+. Only the singly charged complexes were observed. Collision-induced dissociation (CID) products of the [Co(Cys)2]2+, [Co(Cys)2 - H]+ and [Co(Cys) - H]+ complexes were studied as a function of the collision energy, and mechanisms for the dissociation reactions are proposed. These were supported by the results of deuterium labelling experiments and by density functional theory calculations. Since [Co(Cys) - H]+ was one of the main product ions obtained upon the CID of [Co(Cys)2]2+ and of [Co(Cys)2 - H]+ under low-energy conditions, the fragmentation pathways of [Co(Cys) - H]+ and the resulting product ion structures were studied in detail. The resulting product ion structures confirmed the high affinity of cobalt(II) for the sulfur atom of cysteine.     

Ion mobility spectrometric investigation of aromatic cations in the gas phase

In this work, ion mobility (IM) spectra of more than 50 aromatic compounds were recorded with a laser-based IM spectrometer at atmospheric pressure. IM spectra of PAH in the laser desorption experiment show a high complexity resulting from the occurrence of monomeric, dimeric, and oligomeric cluster ions. The mobilities of all compounds were determined in helium as drift gas. This allows the calculation of the diffusion cross sections (Omega(calc)) on the basis of the exact hard sphere scattering model and their comparison with the experimentally determined diffusion cross sections (Omega(exp)). Extended Omega(exp)/Omega(calc) and Omega(exp)/mass correlations were performed in order to gain insight into conformational properties of cationic alkyl benzenes and internal rotation of phenyl rings in aromatic ions. This is demonstrated with some examples, such as the evaluation of the dihedral angle of the ions of 9,10-diphenylanthracene, o- and m-terphenyl, and 1,2,3- and 1,3,5-triphenylbenzene. Furthermore, sandwich and T-structures of dimeric PAH cations are discussed. The analysis was extended to oligomeric ions with up to nine monomer units. Experimental evidence is presented suggesting the formation of pi-stacks with a transition toward modified pi-stacks with increasing cluster size. The distance between monomeric units in dimeric and oligomeric ions was obtained.     

Supramolecular assemblies of quaternary ammonium cations and halide anions in the gas phase: ESMS-FTICR data and computer modelling

Supramolecular aggregates of tetraalkylammonium halides (R4NX) are formed by electrospray out of acetonitrile solution. Mass spectrometry reveals 88 charged aggregates for R= Me, Et, Bu; X= Br, I, ranging up to [(Bu4N)39Br42]3- in size. With the objective of improving calculations of intermolecular energies for supramolecular aggregates of ions, calibrated semi-empirical potentials for inter-ion interactions have been developed and applied to these aggregates. The accuracy of the calculated energies is supported by the measured collisional dissociation energy of (Et4N+)4 (I-)5. Energy optimisations indicate that the probable structures have the halide ions dispersed in a matrix of cations, which, for Bu4N+, can be mutually attractive. The aggregates are structurally fluid, with multiple structures separated by 4-8 kJmol(-1). The energy calculations are entirely consistent with the observed formation of large aggregates, and of multiply charged anions. It is estimated that the cohesive energies of supramolecular assemblies of ions such as these reach about 40 kJmol(-1) per constituent ion.     

Ion Chromatographic determination of trace anions and cations in high-purity water

An ion chromatographic measuring system for the off-line and on-line determination of some trace anions and cations in high-purity water is presented. The ng/L level of anions and cations in 20–130 mL high-purity water can be analyzed after preconcentration on ion exchange columns. The concentrated solutes are eluted by eluents from the trap column and separated using a Dionex analytical column. The quantification of each ion is achieved using the suppressor technique and conductivity detector. The influence of various parameters on the results is discussed. The detection limits of cations and anions are between 10 and 30 ng/L for chloride, bromide, nitrate, phosphate, sulphate, sodium, ammonium, potassium, magnesium and calcium ions.     

Ion Chromatographic determination of trace anions and cations in high-purity water

An ion chromatographic measuring system for the off-line and on-line determination of some trace anions and cations in high-purity water is presented. The ng/L level of anions and cations in 20-130 mL high-purity water can be analyzed after preconcentration on ion exchange columns. The concentrated solutes are eluted by eluents from the trap column and separated using a Dionex analytical column. The quantification of each ion is achieved using the suppressor technique and conductivity detector. The influence of various parameters on the results is discussed. The detection limits of cations and anions are between 10 and 30 ng/L for chloride, bromide, nitrate, phosphate, sulphate, sodium, ammonium, potassium, magnesium and calcium ions.     

C(5)H(7)O(2)(+) ions: the correlation between their thermochemistry in acidic solution and their chemistry in the gas phase

Each of a series of C(5)H(6)O(2) isomeric carboxylic acid and unsaturated lactones (1-7) was protonated in both concentrated sulfuric acid and trifluoromethanesulfonic acid. The thermally induced transformations of the protonated species were then studied over a temperature range of -30 to +160 degrees C. In the case of alpha,beta-unsaturated lactones, protonation took place on the carbonyl oxygen and gave the corresponding stable O-protonated species. Conversely, unconjugated lactones and acetylenic acid 7 were converted even at low temperature into the diprotonated ketoacid 8H(2)()o(+2)() by the acid-catalyzed addition of water to the C-protonated precursor. Upon being heated at 160 degrees C, this acid gave protonated 1,3-cyclopentanedione. In the absence of water, decarbonylation followed by polymerization was observed in lactones 4 and 5. The CIMS spectra of compounds 1-7 were recorded using methane, ammonia, and moist air as reagent gases to determine the correlation between the fragmentation routes in the gas phase and the transformations observed in solution. Ammonia and moist air enabled us to determine the different proton affinities of these compounds. The data obtained in strong acids were used to assign reasonable structures to the gas-phase ions.     

Unimolecular rearrangements of ketene-O,O-acetals and fragmentations occurring in the gas phase

Gas phase skeletal rearrangements of regioisomeric 3‐cyano‐2‐methoxy‐3a‐alkylfuro[2,3‐b]‐ and [3,2‐b]indoles were evidenced by product ions [M ? 32]^+?, consistent with loss of methanol, on electron ionization in their mass spectra. The rearranged products occurring in gas phase were demonstrated to have elemental composition and fragmentation properties identical to those of authentic samples of 2‐indolyl cyanomalonates. Isotopic labeling experiments support the formation mechanism of the [M ? 32]^+? ion. Additional thermal gas‐phase reaction products were characterized by comparison with an authentic sample. Copyright © 2011 John Wiley & Sons, Ltd.     

Extending the coordination chemistry of molecular P(4)S(3): the polymeric Ag(P(4)S(3))(+) and Ag(P(4)S(3))(2)(+) cations

Upon reacting P(4)S(3) with AgAl(hfip)(4) and AgAl(pftb)(4) [hfip = OC(H)(CF(3))(2); pftb = OC(CF(3))(3)], the compounds Ag(P(4)S(3))Al(hfip)(4) 1 and Ag(P(4)S(3))(2)(+)[Al(pftb)(4)](-) 2 formed in CS(2) (1) or CS(2)/CH(2)Cl(2) (2) solution. Compounds 1 and 2 were characterized by single-crystal X-ray structure determinations, Raman and solution NMR spectroscopy, and elemental analyses. One-dimensional chains of [Ag(P(4)S(3))(x)](infinity) (x = 1, 1; x = 2, 2) formed in the solid state with P(4)S(3) ligands that bridge through a 1,3-P,S, a 2,4-P,S, or a 3,4-P,P eta(1) coordination to the silver ions. Compound 2 with the least basic anion contains the first homoleptic metal(P(4)S(3)) complex. Compounds 1 and 2 also include the long sought sulfur coordination of P(4)S(3). Raman spectra of 1 and 2 were assigned on the basis of DFT calculations of related species. The influence of the silver coordination on the geometry of the P(4)S(3) cage is discussed, additionally aided by DFT calculations. Consequences for the frequently observed degradation of the cage are suggested. An experimental silver ion affinity scale based on the solid-state structures of several weak Lewis acid base adducts of type (L)AgAl(hfip)(4) is given. The affinity of the ligand L to the silver ion increases according to P(4) < CH(2)Cl(2) < P(4)S(3) < S(8) < 1,2-C(2)H(4)Cl(2) < toluene.     

Chlorobis(pentafluoroethyl)phosphane: improved synthesis and molecular structure in the gas phase

(C₂F₅)₂PCl is now accessible through a significantly improved synthesis protocol starting from the technical product (C₂F₅)₃PF₂. (C₂F₅)₃PF₂ was reduced in the first step with NaBH₄ in a solvent‐free reaction at 120 °C. The product, P(C₂F₅)₃, was treated with an excess of an aqueous sodium hydroxide solution to afford the corresponding phosphinite salt Na⁺(C₂F₅)₂PO^? selectively under liberation of pentafluoroethane. Subsequent chlorination with PhPCl₄ resulted in the selective formation of (C₂F₅)₂PCl, which was isolated by fractional condensation in an overall yield of 66 %. The gas electron diffraction (GED) pattern for (C₂F₅)₂PCl was recorded and found to be described by a two‐conformer model. A quantum chemical investigation of the potential‐energy surface revealed the possible existence of many low‐energy conformers, each with a number of low‐frequency vibrational modes and therefore large‐amplitude motions. The conformer calculated to be most stable was also found to be most abundant by GED and comprised 61(5) % of the total. The molecular structure parameters determined by GED were in good agreement with those calculated at the MP2/TZVPP level of theory; the only significant difference was a discrepancy of about 3° in the C‐P‐C angle, which, for the lowest‐energy conformer, was refined to 98.2(4)° and was calculated to be 94.9°.     

Hydration of alumina cluster anions in the gas phase

Hydration reactions of anionic aluminum oxide clusters were measured using a quadrupole ion trap secondary ion mass spectrometer, wherein the number of Lewis acid sites were determined. The extent of hydration varied irregularly as cluster size increased and indicated that the clusters possessed condensed structures where the majority of the Al atoms were fully coordinated, with a limited number of undercoordinated sites susceptible to hydrolysis. For maximally hydrated ions, the number of OH groups per Al decreased in an exponential fashion from 4.0 in Al(1) cluster to 1.4 in the Al(9) cluster, which was greater than that expected for a highly hydroxylated surface but less than that for solution phase alumina clusters.     

Rearrangement of aromatic sulfonate anions in the gas phase

Collisionally activated dissociation of deprotonated aromatic sulfonic acids in the gas phase causes rearrangement and fragmentation to produce the corresponding phenoxide ions. The mechanism for this reaction has been investigated and the results of this study favor initial intramolecular nucleophilic addition of a sulfonate oxygen atom to the aromatic ring, a process which is followed by heterolytic cleavage of the carbon–sulfur bond to rearomatize the ring. The product from this addition–elimination sequence is the anion of a sulfurous acid half-ester, which loses SO₂ to generate the corresponding phenoxide ion.     

Atmospheric chemistry of C2F5CH2OCH3 (HFE-365mcf)

FTIR smog chamber techniques were used to measure k(Cl + C(2)F(5)CH(2)OCH(3)) = (2.52 ± 0.37) × 10(-11) and k(OH + C(2)F(5)CH(2)OCH(3)) = (5.78 ± 1.02) × 10(-13) cm(3) molecule(-1) s(-1) in 700 Torr of air diluent at 296 ± 1 K. The atmospheric lifetime of C(2)F(5)CH(2)OCH(3) is estimated to be 20 days. Reaction of chlorine atoms with C(2)F(5)CH(2)OCH(3) proceeds 18 ± 2% at the -CH(2)- group and 82 ± 2% at the -CH(3) group. Reaction of OH radicals with C(2)F(5)CH(2)OCH(3) proceeds 44 ± 5% at the -CH(2)- group and 56 ± 5% at the -CH(3) group. The atmospheric fate of C(2)F(5)CH(2)OCH(2)O radicals is reaction with O(2) to give C(2)F(5)CH(2)OCHO. The atmospheric fate of C(2)F(5)CH(O)OCH(3) radicals is C-C bond-cleavage to give C(2)F(5) radicals and CH(3)OCHO (methyl formate). The infrared spectrum was recorded and used to estimate a global warming potential of 6 (100 year time horizon) for C(2)F(5)CH(2)OCH(3).     

Analysis of the intermolecular interaction between CH(3)OCH(3), CF(3)OCH(3), CF(3)OCF(3), and CH(4): high level ab initio calculations

The intermolecular interaction energies of the CH₃OCH₃? CH₄, CF₃OCH₃? CH₄, and CF₃OCF₃? CH₄ systems were calculated by ab initio molecular orbital method with the electron correlation correction at the second order Møller–Plesset perturbation (MP2) method. The interaction energies of 10 orientations of complexes were calculated for each system. The largest interaction energies calculated for the three systems are ?1.06, ?0.70, and ?0.80 kcal/mol, respectively. The inclusion of electron correlation increases the attraction significantly. It gains the attraction ?1.47, ?1.19, and ?1.27 kcal/mol, respectively. The dispersion interaction is found to be the major source of the attraction in these systems. In the CH₃OCH₃? CH₄ system, the electrostatic interaction (?0.34 kcal/mol) increases the attraction substantially, while the electrostatic energies in the other systems are not large. Fluorine substitution of the ether decreases the electrostatic interaction, and therefore, decreases the attraction. In addition the orientation dependence of the interaction energy is decreased by the substitution. © 2002 Wiley Periodicals, Inc. J Comput Chem 23: 1472–1479, 2002     

Electronic structure of the hydroxo and methoxo oxometalate anions MO3(OH)- and MO3(OCH3)- (M = Cr, Mo, and W)

The electronic structure of the mononuclear hydroxo MO3(OH)- and methoxo MO3(OCH3)- Group 6 oxometalate anions (M = Cr, Mo, and W) were examined by photodetachment photoelectron spectroscopy and electronic structure calculations at the density functional and CCSD(T) levels of theory. All of the anions exhibited high electron binding energies (>4.9 eV), with the lowest-energy detachment features arising from oxygen 2p-based orbitals. The combined experimental and theoretical results allowed the change in molecular orbital energy levels to be investigated as a function of metal (Cr, Mo, or W) and ligand (-OH, -OCH3). A number of fundamental thermodynamic properties of the anions and corresponding neutrals were predicted on the basis of the theoretical calculations. The calculations indicate high O-H bond dissociation energies for MO2(OR)(O-H) (R = H, CH3) and MO3(O-H), consistent with their high Br?nsted acidities (just below that of H2SO4 in the gas phase) and the high ionization energies of their conjugate base anions. This suggests that the corresponding radicals should readily abstract H atoms from organic molecules.     

Formation and reactivity of metal carbonyl anions in the gas phase

The reactions of metal carbonyl anions (M(CO)_n^?; M = Cr, Mn and Fe; n = 1–3) with n-heptane, water and methanol were studied with use of a Fourier transform ion cyclotron resonance (FT-ICR) mass spectrometer equipped with an external ion source. The M(CO)_n^? ions were formed in the FT-ICR cell by collision-induced dissociation of the most abundant primary ion generated by electron impact of the appropriate metal carbonyl compound present in the external ion source. The M(CO)_n^? ions were allowed subsequently to undergo non-reactive collisions with argon in order to remove possible excess internal/translational energy prior to the ion/molecule reaction. Only the Cr(CO)₃^?, Mn(CO)₃^? and Fe(CO)₂^? ions react with n-heptane. This reaction proceeds by loss of H₂ from the collision complex and the Cr(CO)₃^? and Fe(CO)₂^? ions react about three times more efficiently than the Mn(CO)₃^? ion. With water, Mn(CO)^? and Fe(CO)₃^? are unreactive, whereas the other ions react by loss of one or two CO molecules from the collision complex. The rate of the reaction with water decreases in the order Cr(CO)₃^?, Fe(CO)₂^?, Cr(CO)₂^?, Fe(CO)^?, Mn(CO)₃^? and Mn(CO)₂^?. With methanol, the Cr(CO)₂^? ion reacts by loss of two CO molecules from the collision complex, whereas loss of one CO molecule and elimination of CO + H₂ occur in the reaction with Cr(CO)₃^?. Competing loss of CO and one or two H₂ molecules occurs in the reactions of Mn(CO)₃^? and Fe(CO)₂^? with methanol. The rate of the reaction with methanol decreases in the order Cr(CO)₃^?, Fe(CO)₂^?, Cr(CO)₂^? and Mn(CO)₃^?.