The sodium salt of a tris­(tridentate anion)­gadolinium(III) complex: penta­sodium bis­[chelidamato(3−)][chelidamato(2−)]­gadolinate(III) hexa­deca­hydrate

The sodium salt of a complex anion formed between gadolinium(III) and three variously deprotonated chelidamic acid (4‐hydroxy­pyridine‐2,6‐di­carboxyl­ic acid) ligand moi­eties, assigned as Na₅[Gd(C₇H₂NO₅)₂(C₇H₃NO₅)]·16H₂O, i.e. pentasodium (4‐hydroxy­pyridine‐2,6‐di­carboxyl­ate)­bis(4‐oxido­pyridine‐2,6‐di­carboxyl­ate)­gadolinium(III) hexadecahydrate, forms as colourless monoclinic crystals upon vapour diffusion of ethanol into its aqueous solution. The ligand moieties, assigned as two trianionic and one dianionic chelidamate species, are all tridentate in the complex anion of tricapped trigonal prismatic donor‐atom geometry. The geometry of the ligands and that of the primary coordination sphere is very similar to that of the analogous anionic tris­(ligand)–rare earth complexes of the pyridine‐2,6‐di­carboxyl­ate (dipicolinate) dianion.     

Bis(μ‐pyridine‐2,6‐carboxyl­ato‐O,N,O′:O)­bis­[tri­aqua­manganese(II)]–pyridine‐2,6‐di­carboxylic acid (1/2)

In the structure of the title compound, [Mn₂(C₇H₃NO₄)₂(H₂O)₆]·2C₇H₅NO₄, a centrosymmetric dinuclear complex, hexaa­aqua­bis­(pyri­dine‐2,6‐di­carboxyl­ato)­dimanganese(II) and free pyri­dine‐2,6‐di­carboxyl­ic acid are present in a 1:2 ratio. In the complex, each Mn²⁺ ion is coordinated by three O atoms and one N atom from the pyridine‐2,6‐di­carboxyl­ate ligands and by three water O atoms, resulting in a distorted pentagonal bipyramidal coordination. Within the centrosymmetric dinuclear complex, two Mn²⁺ ions are bridged by two carboxyl­ate O atoms. The crystal structure is stabilized by hydrogen bonds involving all the H atoms of the water ligands.     

Three methoxy‐substituted diethyl 4‐­phenyl‐2,6‐di­methyl‐1,4‐di­hydro­pyridine‐3,5‐di­carboxyl­ate compounds

Diethyl 4‐(2,5‐di­methoxy­phenyl)‐2,6‐di­methyl‐1,4‐di­hydro­pyridine‐3,5‐di­carboxyl­ate, C₂₁H₂₇NO₆, (I), diethyl 4‐(3,4‐di­methoxy­phenyl)‐2,6‐di­methyl‐1,4‐di­hydro­pyridine‐3,5‐di­carboxyl­ate, C₂₁H₂₇NO₆, (II), and diethyl 2,6‐di­methyl‐4‐(3,4,5‐tri­methoxy­phenyl)‐1,4‐di­hydro­pyridine‐3,5‐di­carboxyl­ate, C₂₂H₂₉NO₇, (III), crystallize with hydrogen‐bonding networks involving the H atom bonded to the N atom of the 1,4‐di­hydro­pyridine ring and carbonyl O atoms in (I) and (II). Unusually, (III) shows O atoms of methoxy groups serving as hydrogen‐bond acceptors.     

The supramolecular structure of pyridine‐2,6‐dicarboxylic acid

The structure of pyridine‐2,6‐di­carboxyl­ic acid, C₇H₅NO₄, has been determined at 0.71 Å resolution. The mol­ecule is located on a site with mirror symmetry. A one‐dimensional supra­molecular structure is stabilized in the solid state through a strong symmetric double hydrogen bond, with H?O distances of 1.86 (3) Å and O—H?O angles of 167 (3) and 171 (5)°. This arrangement is similar but not identical to that reported for the isoelectronic isophthalic acid (benzene‐1,3‐di­carboxyl­ic acid).     

An indium(III)–water chain based on an unusual acyclic water pentamer

An in situ reaction under hydro­thermal conditions leads to the formation of the title compound, diaqua­(pyridine‐2‐carboxyl­ato)­(pyridine‐2,6‐dicarboxyl­ato)indium(II) trihydrate, [In(C₆H₄NO₂)(C₇H₃NO₄)(H₂O)₂]·3H₂O, in which the central In^III atom is seven‐coordinated by one pyridine‐2,6‐di­carboxyl­ate ligand, one pyridine‐2‐carboxyl­ate ligand and two water mol­ecules in a penta­gonal–bipyramidal coordination environment. An indium(III)–water chain based on an unusual water pentamer is observed.     

A one‐dimensional ladder‐like coordination polymer derived from chains formed via hydrogen bonds: catena‐poly­[[aqua­di­pyridine­nickel(II)]‐μ‐2,2′‐di­thio­dibenzoato‐κ3O,O′:O′′]

The title one‐dimensional chain nickel(II)–di­sulfide complex, [Ni(C₁₄H₈O₄S₂)(C₅H₅N)₂(H₂O)]_n, has each Ni^II cation coordinated by two N atoms from two pyridine ligands, three carboxyl­ate O atoms from two different di­thio­dibenzoate ligands and one O atom from a coordinated water mol­ecule, in a distorted octahedral coordination geometry. Each di­thio­dibenzoate ion links two Ni^II cations through its carboxyl­ate O atoms, making the structure polymeric. Hydro­gen‐bond interactions between two shoulder‐to‐shoulder chains lead to the formation of a ladder‐like structure.     

A single‐strand helical coordination polymer: catena‐poly­[[[tri­aqua­nickel(II)]‐μ‐2,2′‐bi­pyridine‐3,3′‐di­carboxyl­ato‐κ3N,N′:O] monohydrate]

The asymmetric unit of the title compound, {[Ni(C₁₂H₆N₂O₄)(H₂O)₃]·H₂O}_n, is composed of a lattice water mol­ecule and a nickel(II) ion that is coordinated by three water mol­ecules and the two N atoms of a 2,2′‐bi­pyridine‐3,3′‐di­carboxyl­ate ligand. The twist of the 2,2′‐bi­pyridine‐3,3′‐di­carboxyl­ate unit and the coordination of one carboxyl­ate group to a symmetry‐related Ni^II atom generate a helical chain that runs along the b axis. Intrahelical hydrogen bonds participate in controlling the orientation of the helices, and both right‐handed and left‐handed helices are connected by interhelical hydrogen bonds into two‐dimensional sheets.     

Diels–Alder adducts of maleic ­anhydride and dienes: new compounds by crystallization

We have determined the crystal structures of bi­cyclo­[2.2.1]­hept‐2‐ene‐endo‐cis‐5,6‐di­carboxyl­ic anhydride, C₉H₈O₃, (I), 1,2,3,4,7,7‐hexa­chloro­bi­cyclo­[2.2.1]­hept‐2‐ene‐endo‐cis‐5,6‐di­carboxyl­ic anhydride diethyl ether solvate, C₉H₂Cl₆O₃·0.16­C₄H₁₀O, (II), bi­cyclo­[2.2.1]­hept‐2‐ene‐endo‐cis‐5,6‐di­carboxyl­ic acid, C₉H₁₀O₄, (III), 1,2,3,4,7,7‐hexa­chloro­bi­cyclo­[2.2.1]­hept‐2‐ene‐endo‐cis‐5,6‐di­carboxyl­ic acid, C₉H₄Cl₆O₄, (IVa) and (IVb), and ethyl 1,2,3,4,7,7‐hexa­chloro‐6‐carboxybi­cyclo­[2.2.1]­hept‐2‐ene‐endo‐cis‐5‐carboxyl­ate monohydrate, C₁₁H₈Cl₆O₄·H₂O, (V). Compounds (I) and (II) were prepared by a standard Diels–Alder reaction from maleic anhydride and cyclo­penta­diene or hexa­chloro­cyclo­penta­diene, respectively. The crystal‐growing processes of these compounds led to surprising results: rapid recrystallization of (I) from diethyl ether and (II) from petroleum ether gave crystals of these compounds, however, crystallization by slow evaporation techniques using common solvents yielded new compounds in which the five‐membered heterocycle has been cleaved.     

Linear chains in polymeric di­cyclo­hexyl­ammonium tri­butyl­(4‐oxo‐4H‐pyran‐2,6‐di­carboxyl­ato)­stannate and methyl­phenyl­ammonium tri­butyl(pyridine‐2,6‐di­carboxyl­ato)­stannate containing trigonal bipyramidal tin

catena‐Poly­[di­cyclo­hexyl­ammonium [tri­butyl­tin‐μ‐(4‐oxo‐4H‐pyran‐2,6‐di­carboxyl­ato‐O²:O⁶)]], (C₁₂­H₂₄N)­[Sn(C₇­H₂­O₆)(C₄H₉)₃], consists of 4‐oxo‐4H‐pyran‐2,6‐di­carboxyl­ato groups that axially link adjacent tri­butyl­tin units into a linear polyanionic chain. The ammonium counter‐ions surround the chain, and each cation forms a pair of hydrogen bonds to the double‐bond carbonyl O atoms of the same dianionic group. The chain propagates in a zigzag manner along the c axis of the monoclinic cell. In catena‐poly­[methyl­(phenyl)­ammonium [tri­butyl­tin‐μ‐(pyridine‐2,6‐di­carboxyl­ato‐O²:O⁶)]], (C₇H₁₀N)­[Sn(C₇H₃NO₄)­(C₄H₉)₃], the pyridine‐2,6‐di­carboxyl­ato groups also link the tri­butyl­tin groups into a chain, but the hydrogen‐bonded chain propagates linearly on the ac face of the monoclinic cell.     

2,6‐Di­phenyl­pyridine‐4‐carboxyl­ic acid

The distinctive feature of the crystal structure of 2,6‐di­phenyl­pyridine‐4‐carboxyl­ic acid, C₁₈H₁₃NO₂, is the formation of intermolecular O—H?O hydrogen bonds that lead to the formation of centrosymmetric cyclic dimers with R(8) topology. Molecules related by translation along the b axis exhibit strong π–π stacking of aromatic rings, with an average interplanar distance of 3.3 Å.     

Bis(μ‐ethyl pyridine‐2,6‐di­carboxyl­ato)­bis­[di­aqua­chloro­cadmium(II)] dihydrate

The reaction of cadmium chloride with pyridine‐2,6‐di­carboxylic acid (PDA) and 98% H₂SO₄ in ethanol led to the formation of the title compound, bis­[μ‐6‐(ethoxy­carbonyl)­pyridine‐2‐carboxyl­ato]‐1:2κ⁴O⁶,N,O²:O²;1:2κ⁴O²:O²,N,O⁶‐bis­[di­aqua­chloro­cadmium(II)] dihydrate, [Cd₂(C₉H₈NO₄)₂Cl₂(H₂O)₄]·2H₂O. PDA is esterified to monoethyl ­pyridine‐2,6‐di­carboxyl­ate (MEPD) by the catalysis of H₂SO₄ during the reaction. The dinuclear Cd^II complex lies about an inversion centre and the unique Cd atom has a pentagonal–bipyramidal geometry. The two Cd atoms are bridged by two carboxyl­ate O atoms, forming a planar Cd₂O₂ unit. Stair‐like chains are formed via O—H⋯Cl hydrogen bonds and these are further arranged into two‐dimensional layers via hydrogen bonds involving solvate water mol­ecules.     

A one‐dimensional zigzag coordination polymer of di­aqua­(pyridine‐2,3‐di­carboxyl­ato)­cobalt(II)

The asymmetric unit of the title one‐dimensional coordination polymer, catena‐poly­[[μ‐pyridine‐2,3‐di­carb­oxyl­ato‐1κO:2κ²N,O′‐bis­[di­aqua­cobalt(II)]]‐μ‐pyridine‐2,3‐di­carboxyl­ato‐1κ²N,O:2κO′:1′κO′], [Co(C₇H₃NO₄)(H₂O)₂]_n, is composed of a cobalt(II) ion, a pyridine‐2,3‐di­carboxyl­ate dianion and two water mol­ecules. The polymer has a zigzag structure consisting of a chain of edge‐fused rings, and the polymer chains are linked by O—H⃛O hydrogen bonds into a three‐dimensional framework.     

Copper(II) and zinc(II) complexes of pyridine‐2,6‐di­carboxyl­ic acid

The title compounds, bis­(pyridine‐2,6‐di­carboxyl­ato‐N,O,O′)copper(II) monohydrate, [Cu(C₇H₄NO₄)₂]·H₂O, andbis(pyridine‐2,6‐dicarboxylato‐N,O,O′)zinc(II) trihydrate, [Zn(C₇H₄NO₄)₂]·3H₂O, have distorted octahedral geometries about the metal centres. Both metal ions are bonded to four O atoms and two pyridyl‐N atoms from the two terdentate ligand mol­ecules, which are nearly perpendicular to each other. The copper(II) complex has twofold crystallographic symmetry and contains two different ligand mol­ecules, one of which is neutral and another doubly ionized. In contrast, the zinc(II) complex contains two identical singly ionized ligand mol­ecules. Both crystal structures are stabilized by O—H?O intermolecular hydrogen bonds between the complex and the water mol­ecules.     

Two new conformationally restricted 4,5‐dihydroxynorvaline analogues with a norbornane skeleton

The structures of two conformationally restricted 4,5‐di­hydroxy­norvaline analogues with a norbornane skeleton, namely methyl (1S,2S,3R,4R)‐2‐benz­amido‐3‐(1,2‐di­hydroxy­ethyl)­bi­cyclo[2.2.1]­heptane‐2‐carboxyl­ate, C₁₈H₂₃NO₅, and methyl (1R,2S,3R,4S)‐2‐benz­amido‐3‐(1,2‐di­hydroxy­ethyl)­bi­cyclo[2.2.1]­heptane‐2‐carboxyl­ate, C₁₈H₂₃NO₅, exhibit a conformation in the helical region of the ?,ψ map but their handedness is opposite. In both cases, the torsion angles (χ^1,1) giving the relative orientation of the 1,2‐di­hydroxy­ethyl group of the amino acid side chain and the benz­amide group of the peptide chain indicate that these groups adopt a nearly eclipsed conformation. Both compounds show a complex hydrogen‐bonding pattern.     

(–)‐Gibberic acid: hydrogen‐bonding pattern of the monohydrate of a non‐­racemic tetracyclic δ‐keto acid derivative of gibberellin A3

In the the title compound, 1,7‐di­methyl‐8‐oxo‐4bα,7α‐gibba‐1,3,4a(10a)‐triene‐10β‐carboxyl­ic acid monohydrate, C₁₈H₂₀O₃·H₂O, the water of hydration accepts a hydrogen bond from the carboxyl and donates hydrogen bonds to the carboxyl carbonyl and the ketone in two different screw‐related neighbors, which are mutually translational, yielding a complex three‐dimensional hydrogen‐bonding array.     

Hydrogen bonding in the inner-salt zwitterion and in two different charged forms of 5,6-bis(2-pyridyl)pyrazine-2,3-dicarboxylic acid

5,6-Bis(2-pyridyl)­pyrazine-2,3-di­carboxyl­ic acid exists as an inner-salt zwitterion, 3-carboxy-5-(2-pyridinio)-6-(2-pyridyl)­pyrazine-2-carboxyl­ate, (Ia), C₁₆H₁₀N₄O₄. The adjacent pyridine and pyridinium rings are almost coplanar due to the presence of an intramolecular hydrogen bond involving the pyridine N atom and the NH H atom of the pyridinium group. In the crystal of (Ia), symmetry-related mol­ecules are hydrogen bonded via the carboxyl­ic acid OH group and one of the carboxyl­ate O atoms to form a polymer, which exhibits a channel-type structure. In the HCl, HClO₄ and HPF₆ salts, 6-­carboxy-5-carboxyl­ato­pyrazine-2,3-diyldi-2-pyridinium chloride 2.25-hydrate, (II), C₁₆H₁₁N₄O₄⁺·Cl⁻·2.25H₂O, 6-­carboxy-5-carboxyl­ato­pyrazine-2,3-diyldi-2-pyridinium perchlor­ate trihydrate, (IIIa), C₁₆H₁₁N₄O₄⁺·ClO₄⁻·3H₂O, and 6-car­boxy-5-carboxyl­ato­pyrazine-2,3-diyldi-2-pyridinium hexa­fluoro­phosphate trihydrate, (IIIb), C₁₆H₁₁N₄O₄⁺·PF₆⁻·3H₂O, both pyridine rings are protonated. In the perchlorate form, and in the isomorphous hexa­fluoro­phosphate form, the mol­ecule possesses C₂ symmetry, with has a symmetrical intramolecular hydrogen bond involving the adjacent carboxyl­ate and carboxyl­ic acid substituents. In the crystals of the chloride and perchlorate (or hexa­fluoro­phosphate) salts, hydrogen-bonded polymers are formed which are three-dimensional and one-dimensional, respectively.     

Hydrogen‐bonded complexes of 2‐pyridone with centrosymmetric and non‐centrosymmetric dicarboxylic acids

2‐Pyridone (2‐oxo­pyrimidine) forms hydrogen‐bonded com­plexes with di­carboxyl­ic acids, the molar ratio of 2‐pyridone/di­carboxyl­ic acid being 2:1 for the complexes with oxalic acid (ethanedioic acid), 2C₅H₅NO·C₂H₂O₄, (I), and trans‐β‐hydro­muconic acid (trans‐hex‐3‐enedioic acid), 2C₅H₅NO·C₆H₈O₄, (II), and 1:1 for the complexes with trans‐glutaconic acid (trans‐pent‐2‐enedioic acid), C₅H₅NO·C₅H₆O₄, (III), and l ‐­tartaric acid (l ‐2,3‐di­hydroxy­butane­dioic acid), C₅H₅NO·C₄H₆O₆·H₂O, (IV). Common features in the hydrogen‐bonding patterns were found for the centrosymmetric and non‐centrosymmetric acids, respectively. The 2‐pyridone mol­ecule takes the lactam form in these crystals.     

Amino­pyrimidine–carboxyl­(ate) interactions in trimethoprim maleate,an antifolate drug

In the title cocrystal, trimethoprim maleate [2,4‐di­amino‐5‐(3,4,5‐tri­methoxy­benzyl)­pyrimidin‐1‐ium maleate], C₁₄H₁₉­N₄O₃⁺·­C₄H₃O₄^?, the trimethoprim mol­ecule is protonated at N1. The carboxyl group of the maleate ion makes a specific double hydrogen bond of type N—H?O with the 2‐amino group and the protonated N1 atom of the trimethoprim cation which is similar to the carboxyl­ate–trimethoprim cation interaction observed in the complex of di­hydro­folate reductase with trimethoprim. The pyrimidine moieties of trimethoprim cations are centrosymmetrically paired through a pair of N—H?N hydrogen bonds involving the 4‐amino group and the pyridinium N3 atom of a symmetry‐related molecule. One of the O atoms at the maleate carboxyl­ate group bridges the 2‐­amino and 4‐amino groups on either side of the paired trimethoprim cations. The other O atom of the carboxyl­ate group forms an intramolecular O—H?O hydrogen bond with the carboxyl group. These characteristic hydrogen bonds result in infinite two‐dimensional aggregation of rings into a supramolecular ladder, which is further crosslinked through weak C—H?O interactions with methoxy groups of neighbouring trimethoprim mol­ecules to form a layered structure.     

Cocrystals of diastereoisomers of 1,4‐dihydro­pyridine derivatives

A mixture of the RR/SS and RS/SR diastereoisomeric pairs of methyl 4‐(2,4‐dichloro­phen­yl)‐2,7‐dimethyl‐5‐oxo‐1,4,5,6,7,8‐hexa­hydro­quinoline‐3‐carboxyl­ate, C₁₉H₁₉Cl₂NO₃, forms cocrystals in which there is one unique mol­ecule in the asymmetric unit, but the mol­ecule displays disorder in the region of the 7‐position of the quinoline ring system as a result of the random occurrence of the diastereoisomers at the same crystallographic site. A similar arrangement exists in the monohydrate cocrystals that form from a mixture of the RR/SS and RS/SR diastereoisomeric pairs of methyl 4‐(2,4‐dichloro­phen­yl)‐2‐methyl‐7‐phenyl‐5‐oxo‐1,4,5,6,7,8‐hexa­hydro­quinoline‐3‐carboxyl­ate monohydrate, C₂₄H₂₁Cl₂NO₃·H₂O. These compounds belong to a class of 1,4‐dihydro­pyridines whose members have calcium modulatory properties. The 1,4‐dihydro­pyridine rings have the usual shallow boat conformation. In each structure, the 2,4‐dichloro­phenyl ring is oriented such that the 2‐chloro substituent is in a synperi­planar orientation with respect to the 1,4‐dihydro­pyridine ring plane. In each crystal structure, the mol­ecules are linked into chains by N—H⋯O hydrogen‐bonding inter­actions.     

catena‐Poly­[[di­aqua­(nicotinato‐κ2O,O′)­cadmium(II)]‐μ‐nicotinato‐κ3N:O,O′]

The title compound, [Cd(C₆H₄NO₂)₂(H₂O)₂]_n, forms a one‐dimensional chain structure based on a Cd atom with approximate pentagonal bipyramidal coordination geometry and two nicotinate ligands in different coordination modes. One acts as a tridentate ligand, chelating one Cd atom through the carboxyl­ate group while simultaneously binding to a second symmetry‐related Cd atom through the pyridine N atom; the other acts only as a bidentate ligand through its carboxyl­ate group. Hydro­gen bonds utilizing the coordinated water mol­ecules, uncoordinated nitro­gen and carboxyl­ate O atoms as acceptors link the chains.