Two isomorphous complexes: di­chloro­[phthalocyaninato(2–)]­tin(IV) and di­chloro­[phthalocyaninato(2–)]­germanium(IV)

Isomorphous triclinic forms of di­chloro­[phthalocyaninato(2−)]­tin(IV), [Sn(C₃₂H₁₆N₈)Cl₂], and di­chloro­[phthalocyaninato(2−)]­ger­manium(IV), [Sn(C₃₂H₁₆N₈)Cl₂], and a monoclinic form of the latter have been obtained from the reaction of pure tin and germanium powder, respectively, with phthalo­nitrile under a stream of ICl vapour. All three crystal structures consist of centrosymmetric [SnPcCl₂] and [GePcCl₂] [Pc is phthalocyaninate(2−)] mol­ecules, which are separated but interacting. In the triclinic forms (Sn and Ge), the Pc macrocycles are not staggered but slipped, and in the monoclinic form (Ge), the mol­ecules are additionally inclined. In both cases, the central Sn or Ge atom is six‐coordinated by the four iso­indole N atoms of the Pc macrocyclic ligand and by two Cl atoms (located trans) into a tetragonal–bipyramidal structure. The arrangement of [SnPcCl₂] and [GePcCl₂] mol­ecules in the crystal structure is determined mainly by intermolecular C—H⃛Cl, π–π and van der Waals interactions.     

Chlorotris(2,4,6‐trimethylphenyl)tin(IV) and its ethanol hemisolvate

Chloro­tris(2,4,6‐tri­methyl­phenyl)­tin(IV), crystallizes from ethanol as solvent‐free needles, [Sn(C₉H₁₁)₃Cl], (I), and as the hemisolvate, [Sn(C₉H₁₁)₃Cl]·0.5C₂H₆O, (II). The asymmetric unit in (I) has three independent mol­ecules, whereas in (II), there are two [Sn(C₉H₁₁)₃Cl] mol­ecules together with one ethanol molecule. In the unit cell of (II), the ethanol mol­ecules lie in channels between stacks of (Mes)₃SnCl mol­ecules (Mes is 2,4,6‐tri­methyl­phenyl) and each ethanol mol­ecule is disordered (0.50:0.50) over two positions. A comparison of the structures of the title compounds and other (Mes)₃SnX (X = F, Br or I) systems with those of the tri­phenyl­tin analogues shows that the steric requirements of the o‐CH₃ groups are met by a flattening of the SnC₃ skeleton and increases in the average Sn—X and Sn—C values. Comparing Sn—X data for (Mes)₃SnX (X = F, Cl, Br or I) systems with values for the tris(o‐methoxy­phenyl)­tin analogues suggests that the Sn—F distance of 1.961 Å in (Mes)₃SnF may well be characteristic of sterically unhindered four‐coordinate Ar₃SnF systems.     

(±)‐6‐Benzyl‐3,3‐di­methyl­morpholine‐2,5‐dione and its 5‐mono­thio and 2,5‐di­thio derivatives

The morpholine ring of the title dione, C₁₃H₁₅NO₃, shows a boat conformation that is distorted towards a twist‐boat, with the boat ends being the two Csp³ atoms of the ring. The benzyl substituent is in the favoured `exo' position. In the mono­thione derivative, (±)‐6‐benzyl‐3,3‐di­methyl‐5‐thioxo­morpholin‐2‐one, C<sub>13</sub>H<sub>15</sub>NO<sub>2</sub>S, this ring has a much flatter conformation that is midway between a boat and an envelope, with the di­methyl end being almost planar. The orientation of the benzyl group is `endo'. The di­thione derivative, (±)‐6‐benzyl‐3,3‐di­methyl­morpholine‐2,5‐di­thione, C₁₃H₁₅N­OS₂, has two symmetry‐independent mol­ecules, which show different puckering of the morpholine ring. One mol­ecule has a flattened envelope conformation distorted towards a screw‐boat, while the conformation in the other mol­ecule is similar to that in the mono­thione derivative. Intermolecular hydrogen bonds link the mol­ecules in the three compounds, respectively, into centrosymmetric dimers, infinite chains, and dimers made up of one of each of the symmetry‐independent mol­ecules.     

Copper(II) and zinc(II) complexes of pyridine‐2,6‐di­carboxyl­ic acid

The title compounds, bis­(pyridine‐2,6‐di­carboxyl­ato‐N,O,O′)copper(II) monohydrate, [Cu(C₇H₄NO₄)₂]·H₂O, andbis(pyridine‐2,6‐dicarboxylato‐N,O,O′)zinc(II) trihydrate, [Zn(C₇H₄NO₄)₂]·3H₂O, have distorted octahedral geometries about the metal centres. Both metal ions are bonded to four O atoms and two pyridyl‐N atoms from the two terdentate ligand mol­ecules, which are nearly perpendicular to each other. The copper(II) complex has twofold crystallographic symmetry and contains two different ligand mol­ecules, one of which is neutral and another doubly ionized. In contrast, the zinc(II) complex contains two identical singly ionized ligand mol­ecules. Both crystal structures are stabilized by O—H?O intermolecular hydrogen bonds between the complex and the water mol­ecules.     

Two novel glycine metal halogenides: catena‐poly[[[diaqua­nickel(II)]‐di‐μ‐glycine] dibromide] and catena‐poly[[[tetra­aqua­magnesium(II)]‐μ‐glycine] dichloride]

In catena‐poly[[[diaqua­nickel(II)]‐di‐μ‐glycine] dibromide], {[Ni(C₂H₅NO₂)₂(H₂O)₂]Br₂}_n, (I), the Ni atom is located on an inversion centre. In catena‐poly[[[tetra­aqua­magnesium(II)]‐μ‐glycine] dichloride], {[Mg(C₂H₅NO₂)(H₂O)₄]Cl₂}_n, (II), the Mg atom and the non‐H atoms of the glycine mol­ecule are located on a mirror plane. All other atoms are located on general positions. The atomic arrangements of both compounds are characterized by [MO₆] octa­hedra (M = Ni or Mg) connected by glycine mol­ecules, with the halogenide ions in the inter­stices. In (I), four of the coordinating O atoms are from glycine and two are from water mol­ecules, building layers of octa­hedra and organic mol­ecules. In (II), two of the coordinating O atoms are from glycine and four are from water mol­ecules. The octa­hedra and organic mol­ecules form chains.     

(E)‐(4‐Hydroxyphenyl)(4‐nitrophenyl)diazene, (E)‐(4‐methoxyphenyl)(4‐nitrophenyl)diazene and (E)‐[4‐(6‐bromohexyloxy)phenyl](4‐cyanophenyl)diazene

Syntheses and X‐ray structural investigations have been carried out for (E)‐(4‐hydroxy­phenyl)(4‐nitro­phenyl)­diazene, C₁₂H₉N₃O₃, (Ia), (E)‐(4‐methoxy­phenyl)(4‐nitro­phenyl)­diazene, C₁₃H₁₁N₃O₃, (IIIa), and (E)‐[4‐(6‐bromo­hexyl­oxy)­phenyl](4‐cyano­phenyl)­diazene, C₁₉H₂₀BrN₃O, (IIIc). In all of these compounds, the mol­ecules are almost planar and the azo­benzene core has a trans geometry. Compound (Ia) contains four and compound (IIIc) contains two independent mol­ecules in the asymmetric unit, both in space group P (No. 2). In compound (Ia), the independent mol­ecules are almost identical, whereas in crystal (IIIc), the two independent mol­ecules differ significantly due to different conformations of the alkyl tails. In the crystals of (Ia) and (IIIa), the mol­ecules are arranged in almost planar sheets. In the crystal of (IIIc), the mol­ecules are packed with a marked separation of the azo­benzene cores and alkyl tails, which is common for the solid crystalline precursors of mesogens.     

Inclusion compounds of 2,5‐di­phenyl­hydro­quinone

The crystal structures of three 1:2 inclusion compounds that consist of host mol­ecule 2,5‐di­phenyl­hydro­quinone (C₁₈H₁₄O₂) and the guest mol­ecules 2‐pyridone (C₅H₅NO), 1,3‐di­phenyl‐2‐propen‐1‐one (chalcone, C₁₅H₁₂O) and 1‐(4‐meth­oxy­phenyl)‐3‐phenyl‐2‐propen‐1‐one (4′‐methoxy­chal­cone, C₁₆H₁₄O₂) were determined in order to study the ability of guest mol­ecules in inclusion compounds to undergo photoreaction. All of the crystals were found to be photoresistant. The three inclusion compounds crystallize in triclinic space group . In each case, the host/guest ratio is 1:2, with the host mol­ecules occupying crystallographic centers of symmetry and the guest mol­ecules occupying general positions. The guest mol­ecules in each of the inclusion compounds are linked to the host mol­ecules by hydrogen bonds. In the inclusion compound where the guest mol­ecule is pyridone, the host mol­ecule is disordered so that the hydroxy groups are distributed between two different sites, with occupancies of 0.738 (3) and 0.262 (3). The pyridone mol­ecules form dimers via N—H⋯O hydrogen bonds.     

Ethyl N‐[2‐(hydroxy­acetyl)­phenyl]­carbamate,ethyl N‐[2‐(hydroxy­acetyl)‐4‐iodo­phenyl]­carbamate and ethyl N‐[2‐(hydroxy­acetyl)‐4‐methyl­phenyl]­carbamate

In ethyl N‐[2‐(hydroxy­acetyl)phenyl]carbamate, C₁₁H₁₃NO₄, all of the non‐H atoms lie on a mirror plane in the space group Pnma; the mol­ecules are linked into simple chains by a single C—H⋯O hydrogen bond. The mol­ecules of ethyl N‐[2‐(hydroxy­acetyl)‐4‐iodo­phenyl]carbamate, C₁₁H₁₂INO₄, are linked into sheets by a combination of O—H⋯I and C—H⋯O hydrogen bonds and a dipolar I⋯O contact. Ethyl N‐­[2‐(hydroxy­acetyl)‐4‐methyl­phenyl]carbamate, C₁₂H₁₅NO₄, crystallizes with Z′ = 2 in the space group P; pairs of mol­ecules are weakly linked by an O—H⋯O hydrogen bond and these aggregates are linked into chains by two independent aromatic π–π stacking inter­actions.     

Diaqua­malonato(1,10‐phenanthro­line)­zinc(II)

In the crystal structure of the title complex, [Zn(C₃H₂O₄)(C₁₂H₈N₂)(H₂O)₂], the Zn^II atom displays a distorted octa­hedral geometry, being coordinated by two N atoms from the 1,10‐phenanthroline ligand, two O atoms from different carboxyl­ate groups of the chelating malonate dianion and two O atoms of cis water mol­ecules. The complex mol­ecules are linked to form a three‐dimensional supramolecular array by both hydrogen‐bonding inter­actions between coordinated water molecules and the uncoordinated carboxyl­ate O atoms of neighboring mol­ecules, and aromatic π–π stacking inter­actions between neighboring phenanthroline rings.     

A new estra‐1,3,5(10)‐triene‐3,17β‐diol solvate: estradiol–methanol–water (3/2/1)

The title solvate of the steroid 17β‐estradiol (E₂) with methanol and water, C₁₈H₂₄O₂·0.67CH₄O·0.33H₂O, is the first E₂ derivative to contain three crystallographically independent mol­ecules in the asymmetric unit. The three steroid mol­ecules, along with two methanol mol­ecules and a water mol­ecule, create a three‐dimensional hydrogen‐bonded system. Three‐sided columns are formed, with the estradiol mol­ecules aligned lengthwise parallel to (101), and joined by solvent mol­ecules at both hydro­philic ends. The three estradiol mol­ecules differ slightly in their ring‐bowing angles, i.e. the angle between the mean plane of the A ring and that of the BCD ring; this angle ranges from 7.1 to 12.2°.     

trans‐Bis­[ethane‐1,2‐di­thiol­ato(2–)‐S,S′]­bis(2‐mer­cap­to­pyri­dine‐S)­tin(IV)

The title compound, [Sn(C₅H₅NS)₂(C₂H₄S₂)₂], was obtained from a 1:2 mixture of bis­(ethane‐1,2‐di­thiol­ato)­tin(IV) and 2‐mercapto­pyridine. The mol­ecules are discrete monomeric trans‐octahedral units, with the Sn^IV atom at the centre of symmetry, planar 2‐mercapto­pyridine zwitterions and SnS₂C₂ groups in twist–envelope conformations. The 2‐mercapto­pyridine ligands are monodentate and are bonded through the S atoms. The S—Sn distances between the S atom of edt (edt is ethane‐1,2‐di­thiol­ate) and the Sn atom are 2.473 (1) and 2.505 (1) Å, which are slightly longer than the S—Sn distance in Sn(edt)₂ of 2.390 (1) Å. The bond between the 2‐mercapto­pyridine S atom and the Sn atom are, remarkably, weaker than the S—Sn bond involving edt.     

2,3,4,5,6‐Penta­nitro­aniline 1,2‐dichloro­ethane disolvate: `push–pull' deformation of aromatic rings by intra­molecular charge transfer

The title compound, C₆H₂N₆O₁₀·2C₂H₄Cl₂, forms layered stacks of penta­nitro­aniline mol­ecules, which possess twofold symmetry. The voids between these stacks are occupied by dichloro­ethane mol­ecules, which reside near a 2/m symmetry element and display pseudo‐inversion symmetry. The C atoms in one of the two solvent mol­ecules are threefold disordered. In the penta­nitro­aniline mol­ecule, considerable distortion of the benzenoid ring, coupled with the short C—N(H₂) bond and out‐of‐plane NO₂ twistings, point to significant intra­molecular `push–pull' charge transfer at the amino‐ and nitro‐substituted (ortho and para) positions, as theoretically quantified by natural bond orbital analysis of the π‐electron density.     

Tetrakis[(4‐aminopyridinio)acetato‐κO]diaquamanganese(II) diper­chlorate

In the centrosymmetric title complex, [Mn(C₇H₈N₂O₂)₄(H₂O)₂](ClO₄)₂, the Mn^II ion is in an octahedral environment, with the equatorial plane being defined by the O atoms of four monodentate carboxyl­ate groups, and the octahedron being completed by two trans‐coordinated water mol­ecules. There are intramolecular hydrogen bonds between the coordinated water mol­ecules and the non‐coordinated O atoms of the carboxyl­ate groups. Hydrogen bonds between the amino groups and the carboxyl­ate groups of neighbouring mol­ecules generate a layered hydrogen‐bonded network.     

catena‐Poly[[[tetra­aqua­zinc(II)]‐μ‐4,4′‐bipyridine] bis­(4‐hydroxy­benzene­sulfonate) trihydrate]

In the title compound, {[Zn(C₁₀H₈N₂)(H₂O)₄](C₆H₅O₄S)₂·3H₂O}_n, the Zn atom, the bipyridine ligand and one of water mol­ecules are located on twofold rotation axes. The Zn atom is coordinated by four O atoms from four water mol­ecules and two N atoms from two 4,4′‐bipyridine mol­ecules in a distorted octa­hedral geometry. The Zn²⁺ ions are linked by the 4,4′‐bipyridine mol­ecules to form a one‐dimensional straight chain propagating along the c axis. The 4‐hydroxy­benzene­sulfonate counter‐ions are bridged by the solvent water mol­ecules through hydrogen bonds to generate a two‐dimensional layer featuring large pores. In the crystal packing, the intra­layer pores form one‐dimensional channels along the c axis, in which the one‐dimensional [Zn(C₁₀H₈N₂)(H₂O)₄]²⁺ chains are encapsulated. Electrostatic inter­actions between cations and anions and extensive hydrogen bonds result in a three‐dimensional supra­molecular structure.     

Di­aqua(2,2′‐bi­pyridine)­malonato­manganese(II)

In the crystal structure of the title compound, [Mn(C₃H₂O₄)(C₁₀H₈N₂)(H₂O)₂], the Mn^II atom demonstrates a distorted octahedral geometry, being coordinated by two N atoms of a 2,2′‐bi­pyridine ligand, two O atoms from the carboxyl­ate groups of the chelating malonate dianion and two O atoms of two cis water mol­ecules. The complex mol­ecules are linked to form a three‐dimensional supramolecular array by both hydrogen‐bonding interactions between coordinated water and the carboxyl­ate groups of neighboring mol­ecules and aromatic π–π‐stacking interactions of the bi­pyridine rings.     

1:1 Adduct of (S,S)‐4‐amino‐3,5‐bis­(1‐hydroxy­ethyl)‐1,2,4‐triazole with (S,S)‐1,2‐bis­(2‐hydroxy­propionyl)­hydrazine stabilized by eight hydrogen bonds

The structure of the cocrystallized 1:1 adduct of (S,S)‐4‐amino‐3,5‐bis­(1‐hydroxy­ethyl)‐1,2,4‐triazole and (S,S)‐1,2‐bis­(2‐hydroxy­propionyl)­hydrazine, C₆H₁₂N₄O₂·C₆H₁₂N₂O₄, has tetra­gonal symmetry. All eight O‐ and N‐bound H atoms are involved in inter­molecular hydrogen bonds, resulting in infinite zigzag chains of the triazole mol­ecules, with the hydrazine mol­ecules filling the gaps between the chains and completing a three‐dimensional hydrogen‐bonded array.     

Aqua­(di‐2‐pyridylamine)oxalato­copper(II) monohydrate

In the structure of the title complex, [Cu(C₂O₄)(C₁₀H₉N₃)(H₂O)]·H₂O, the Cu^II atom displays a square‐pyramidal geometry, being coordinated by two N atoms from the di‐2‐pyridylamine ligand, two O atoms from the oxalate group and one O atom of a water mol­ecule. The complex mol­ecules are linked to form a three‐dimensional supra­molecular array by hydrogen‐bonding inter­actions between coordinated/uncoordinated water mol­ecules and the uncoordinated oxalate O atoms of neighboring mol­ecules.     

Di­aqua­bis­[μ‐(R,R)‐tartrato‐κ4O1,O2:O3,O4]­dinickel(II) trihydrate

In the crystal structure of the title compound, [Ni₂(C₄H₄O₆)₂(H₂O)₂]·3H₂O, two nickel cations, two tartrate anions and two water mol­ecules form the dimeric complex. Each nickel cation is in a distorted octahedral environment composed of four O atoms of two crystallographically independent tartrate anions, one water mol­ecule and one O atom of a symmetry‐equivalent tartrate anion. The asymmetric unit contains three additional water mol­ecules which are connected via hydrogen bonding.     

Chloro­(μ‐6‐methyl­pyridine‐2‐carboxyl­ato)bis­(6‐methyl­pyridine‐2‐carboxyl­ato)triphenyl­chromium(III)­tin(IV) chloro­triphenyl­tin(IV)

The title compound, [CrSn(C₆H₅)₃(C₇H₆NO₂)₃Cl][Sn(C₆H₅)₃Cl(CH₄O)], was obtained from the reaction of Ph₃SnCl with the complex [Cr(C₇H₆NO₂)₃] in methanol. The structure contains [Ph₃SnCl(MeOH)] (A) and [Ph₃SnClCr(C₇H₆NO₂)₃] (B) mol­ecules. In mol­ecule A, the Sn atom of Ph₃SnCl is coordinated by one methanol mol­ecule. In mol­ecule B, the Sn atom of Ph₃SnCl is coordinated by one carboxyl­ate O atom of [Cr(C₇H₆NO₂)₃]. Mol­ecules A and B are connected through an O—H⋯O hydrogen bond between a carboxyl­ate O atom and the methanol OH group. Weak C—H⋯Cl inter­actions and O—H⋯O hydrogen bonds extend the components of (I) into a two‐dimensional network.     

9(R)‐[6(R)‐Hydroxy­methyl‐1‐oxa‐4‐thia­cyclo­hexan‐2‐yl]hypoxanthine–water (4/3), a nucleoside analogue

The title compound, 9(R)‐[6(R)‐hydroxy­methyl‐1‐oxa‐4‐thia­cyclo­hexan‐2‐yl]‐1,9‐di­hydro‐6H‐purin‐6‐one–water (4/3), C₁₀H₁₂N₄O₃S·0.75H₂O, crystallizes in the triclinic space group P1 with four mol­ecules in the asymmetric unit and 0.75 waters of hydration per mol­ecule. The structure was refined to an R value of 0.072 for 3382 observed reflections. The four crystallographically independent mol­ecules are designated A, B, C and D. All four oxa­thia­ne rings adopt the chair conformation and the purine bases are in an anti orientation with respect to the sugar moieties. Molecules A and D and mol­ecules C and B are base paired by a single hydrogen bond of the type N—H?N. These base pairs are again hydrogen bonded to their translated pairs in the direction of a cell diagonal.