Synthesis,Spectral, Thermal Studies of Co(II), Ni(II), Cu(II) and Zn(II)‐arginato Complexes. Crystal Structure of Monoaquabis(arginato‐κO,κN)copper(II). [Cu(arg)2(H2O)].NaNO3

Transition metal complexes of arginine (using Co(II), Ni(II), Cu(II) and Zn(II) cations separately) were synthesized and characterized by FTIR, TG/DTA‐DrTG, UV‐Vis spectroscopy and elemental analysis methods. Cu(II)‐Arg complex crystals was found suitable for x‐ray diffraction studies. It was contained, one mole Cu^II and Na⁺ ions, two arginate ligands, one coordinated aqua ligand and one solvent NO₃^? group in the asymmetric unit. The principle coordination sites of metal atom have been occupied by two N atoms of arginate ligands, two carboxylate O atoms, while the apical site was occupied by one O atom for Cu^II cation and two O atoms for Co^II, Ni^II, Zn^II atoms of aqua ligands. Although Cu^II ion adopts a square pyramidal geometry of the structure. Co^II, Ni^II, Zn^II cations have octahedral due to coordination number of these metals. Neighbouring chains were linked together to form a three‐dimensional network via hydrogen‐bonding between coordinated water molecule, amino atoms and O atoms of the bridging carboxylate groups. Cu^II complex was crystallized in the monoclinic space group P2₁, a = 8.4407(5) Å, b = 12.0976(5) Å, c = 10.2448(6) Å, V = 1041.03(10) ų, Z = 2. Structures of the other metal complexes were similar to CuII complex, because of their spectroscopic studies have in agreement with each other. Copper complex has shown DNA like helix chain structure. Lastly, anti‐bacterial, anti‐microbial and anti‐fungal biological activities of complexes were investigated.     

Poly[tetra‐μ2‐l‐lactato‐indium(III)sodium(I)]

The asymmetric unit of the title compound, [InNa(C₃H₅O₃)₄]_n, consists of one In^III ion, one Na^I ion and four crystallographically independent l ‐lactate monoanions. The coordination of the In^III ion is composed of five carboxylate O and two hydroxy O atoms in a distorted pentagonal–bipyramidal coordination geometry. The Na^I ion is six‐coordinated by four carboxylate O atoms and two hydroxy O atoms from four l ‐lactate ligands in a distorted octahedral geometry. Each In^III ion is coordinated by four surrounding l ‐lactate ligands to form an [In(l ‐lactate)₄]⁻ unit, which is further linked by Na^I ions through Na—O bonds to give a two‐dimensional layered structure. Hydrogen bonds between the hydroxy groups and carboxylate O atoms are observed between neighbouring layers.     

Lanthanide complexes of 2,2′‐oxydi­acetate: Na5[M(C4H4O5)3](BF4)2·6H2O (M = Nd,Sm or Gd)

The three title complexes, namely pentasodium tris(2,2′‐oxydi­acetato)­neodymium(III) bis­(tetra­fluoro­borate) hexahydrate and its samarium(III) and gadolinium(III) analogues, (I)–(III), respectively, are isomorphous and isostructural and have crystallographic D₃ symmetry. The lanthanide metal ions are nine‐coordinate, binding to three O atoms of three oxodi­acetate ligands. One Na⁺ ion is octahedrally coordinated to six O atoms and the other Na⁺ ion is octahedrally coordinated to four O atoms and two F atoms. The structure is effectively an infinite three‐dimensional polymer, consistent with the exceptional crystal quality. The racemic solutions spontaneously resolve on crystallization. For the individual crystals selected for structural analysis, the Nd and Sm complexes have the Λ configuration, while the Gd complex has the Δ configuration. The lanthanide–oxy­gen distances show the expected contraction of ca 0.02 Å with increasing atomic number for the lanthanide metal.     

Sodium hydrogen nitrilo­tri­acetate dihydrate

In the title compound, Na⁺·C₆H₈NO₆^?·2H₂O, the sodium ion is coordinated in a distorted octahedral manner by two carboxyl­ate O atoms and two water O atoms. Each of these water mol­ecules bridges two adjacent Na ions, resulting in two four‐membered rings of the type Na–O–Na–O.     

KZn(HP2O7)·2H2O and KMn(HP2O7)·2H2O: acid pyrophosphate metallates(II) with layer structures

The crystal structures of the isomorphous title compounds, namely potassium zinc hydrogen pyrophosphate dihydrate and potassium manganese hydrogen pyrophosphate dihydrate, consist of acidic pyrophosphate–metallate(II) layers joined by K⁺ ions and hydrogen‐bridging bonds. The Zn²⁺/Mn²⁺ ions are octahedrally surrounded by four pyrophosphate O atoms and by two water mol­ecules. The (HP₂O₇)^3? anions exhibit eclipsed conformations. The metal ions and water O atoms lie on mirror planes, as does the central O atom of the (HP₂O₇)^3? anion.     

The novel arsenate Na4Co7−xAl2/3x(AsO4)6 (x = 1.37): crystal structure,charge‐distribution and bond‐valence‐sum investigations

The title compound, tetrasodium cobalt aluminium hexaarsenate, Na₄Co_7−xAl_2/3x(AsO₄)₆ (x = 1.37), is isostructural with K₄Ni₇(AsO₄)₆; however, in its crystal structure, some of the Co²⁺ ions are substituted by Al³⁺ in a fully occupied octahedral site (site symmetry 2/m) and a partially occupied tetrahedral site (site symmetry 2). A third octahedral site is fully occupied by Co²⁺ ions only. One of the two independent tetrahedral As atoms and two of its attached O atoms reside on a mirror plane, as do two of the three independent Na⁺ cations, all of which are present at half‐occupancy. The proposed structural model based on a careful investigation of the crystal data is supported by charge‐distribution (CHARDI) analysis and bond‐valence‐sum (BVS) calculations. The correlation between the X‐ray refinement and the validation results is discussed.     

Hydrothermal synthesis and extended structure of poly[aqua(μ5‐ethylenediaminetetraacetato)dizinc(II)]

In the extended structure of the title compound, [Zn₂(C₁₀H₁₂N₂O₈)(H₂O)], prepared under hydrothermal conditions, there are two distinct Zn^II sites. The first, with octahedral geometry, bonds to two N and three O atoms from one ethylenediaminetetraacetate tetraanion (EDTA) and one water molecule. The second, with tetrahedral geometry, coordinates to O atoms from four different EDTA ligands. The EDTA ligand almost encapsulates the octahedral Zn^II ion and binds to four symmetry‐related tetrahedral Zn^II ions, hence generating the extended structure. One noncoordinated O‐atom site on the EDTA ligand connects to the water molecule by hydrogen bonding. Structural comparisons are made with other compounds containing zinc, EDTA and water.     

ESI‐MS studies of the non‐covalent interactions between biologically important metal ions and N‐sulfonylcytosine derivatives

The aim of this report is to present the electrospray ionization mass spectrometry results of the non‐covalent interaction of two biologically active ligands, N‐1 ‐ (p‐toluenesulfonyl)cytosine, 1‐TsC, 1 and N‐1 ‐ methanesulfonylcytosine, 1‐MsC, 2 and their Cu(II) complexes Cu(1‐TsC‐N3)₂Cl₂, 3 and Cu(1‐MsC‐N3)₂Cl₂ and 4 with biologically important cations: Na⁺, K⁺, Ca²⁺, Mg²⁺ and Zn²⁺. The formation of various complex metal ions was observed. The alkali metals Na⁺ and K⁺ formed clusters because of electrostatic interactions. Ca²⁺ and Mg²⁺ salts produced the tris ligand and mixed ligand complexes. The interaction of Zn²⁺ with 1–4 produced monometal and dimetal Zn²⁺ complexes as a result of the affinity of Zn²⁺ ions toward both O and N atoms. Copyright © 2016 John Wiley & Sons, Ltd.     

Bis(μ‐5‐carboxybenzene‐1,3‐dicarboxylato‐κ2O1:O3)bis[(2,2′‐bi‐1H‐imidazole‐κ2N3,N3′)zinc]

The title compound, [Zn₂(C₉H₄O₆)₂(C₆H₆N₄)₂], consists of two Zn^II ions, two 5‐carboxybenzene‐1,3‐dicarboxylate (Hbtc²⁻) dianions and two 2,2′‐bi‐1H‐imidazole (bimz) molecules. The Zn^II centre is coordinated by two carboxylate O atoms from two Hbtc²⁻ ligands and by two imidazole N atoms of a bimz ligand, in a distorted tetrahedral coordination geometry. Two neighbouring Zn^II ions are bridged by a pair of Hbtc²⁻ ligands, forming a discrete binuclear [Zn₂(Hbtc)₂(bimz)₂] structure lying across an inversion centre. Hydrogen bonds between carboxyl H atoms and carboxylate O atoms and between imidazole H atoms and carboxylate O atoms link the binuclear units. These binuclear units are further extended into a three‐dimensional supramolecular structure through extensive O—H...O and N—H...O hydrogen bonds. Moreover, the three‐dimensional nature of the crystal packing is reinforced by the π–π stacking. The title compound exhibits photoluminescence in the solid state, with an emission maximum at 415 nm.     

NMR study of the coordinating behavior of 2,6‐bis(benzimidazol‐2′‐yl)pyridine

The coordination sites of 2,6‐bis(benzimidazol‐2′‐yl)pyridine ( 1 ) toward protons and the diamagnetic metal ions Li⁺, Na⁺, and Co³⁺ were investigated by NMR spectroscopy. Variable temperature ¹H and ¹³C NMR experiments were performed on 1 in order to evaluate the tautomeric equilibrium and hydrogen bonding. Imidazole dicoordinated aromatic nitrogen atoms were protonated by trichloroacetic acid and the three N‐dicoordinated atoms by fuming H₂SO₄. Reactions of the ligand 1 and benzimidazole 2 with metallic sodium or LiH afforded anionic species; the alkali metal ions appeared solvated by THF, but not by the ligands 1 or 2 . In contrast, reaction of 1 with Co(III) produces the stable cation [Co( 1 ‐H)₂]⁺ with cobalt ion coordinated by two molecules of the monodeprotonated ligand. © 2000 John Wiley & Sons, Inc. Heteroatom Chem 11:392–398, 2000     

Synthesis and crystal structure of a two‐dimensional sodium coordination polymer of 4,4′‐(diazenediyl)bis(1H‐1,2,4‐triazol‐5‐one)

The crystal engineering of coordination polymers has aroused interest due to their structural versatility, unique properties and applications in different areas of science. The selection of appropriate ligands as building blocks is critical in order to afford a range of topologies. Alkali metal cations are known for their mainly ionic chemistry in aqueous media. Their coordination number varies depending on the size of the binding partners, and on the electrostatic interaction between the ligands and the metal ions. The two‐dimensional coordination polymer poly[tetra‐μ‐aqua‐[μ₄‐4,4′‐(diazenediyl)bis(5‐oxo‐1H‐1,2,4‐triazolido)]disodium(I)], [Na₂(C₄H₂N₈O₂)(H₂O)₄]_n, (I), was synthesized from 4‐amino‐1H‐1,2,4‐triazol‐5(4H)‐one (ATO) and its single‐crystal structure determined. The mid‐point of the imino N=N bond of the 4,4′‐(diazenediyl)bis(5‐oxo‐1H‐1,2,4‐triazolide) (ZTO²⁻) ligand is located on an inversion centre. The asymmetric unit consists of one Na⁺ cation, half a bridging ZTO²⁻ ligand and two bridging water ligands. Each Na⁺ cation is coordinated in a trigonal antiprismatic fashion by six O atoms, i.e. two from two ZTO²⁻ ligands and the remaining four from bridging water ligands. The Na⁺ cation is located near a glide plane, thus the two bridging O atoms from the two coordinating ZTO²⁻ ligands are on adjacent apices of the trigonal antiprism, rather than being in an anti configuration. All water and ZTO²⁻ ligands act as bridging ligands between metal centres. Each Na⁺ metal centre is bridged to a neigbouring Na⁺ cation by two water molecules to give a one‐dimensional [Na(H₂O)₂]_n chain. The organic ZTO²⁻ ligand, an O atom of which also bridges the same pair of Na⁺ cations, then crosslinks these [Na(H₂O)₂]_n chains to form two‐dimensional sheets. The two‐dimensional sheets are further connected by intermolecular hydrogen bonds, giving rise to a stabile hydrogen‐bonded network.     

The one‐dimensional chain polymer of aqua(tyrosinato)zinc(II)

In the title compound, catena‐poly[[aquazinc(II)]‐μ₃‐tyrosinato], [Zn(C₉H₇NO₃)(H₂O)]_n, each Zn atom has a distorted square‐pyramidal geometry comprised of three O atoms and one N atom from three tyrosinate (tyr) ligands, and one aqua ligand. Two inversion‐related Zn²⁺ ions are bridged by two O atoms from the phenolate groups of two tyr ligands to form a centrosymmetric dimeric unit, which can be described as a planar Zn₂O₂ four‐membered ring. These repeating dimeric units are arranged along the c axis to give a one‐dimensional chain coordination polymer, in which the tyr ligand adopts an unusual chelating/bridging coordination mode.     

Sodium di­phenyl­acetate,an infinite columnar structure

In the title compound, Na⁺·C₁₄H₁₁O₂^?, the di­phenyl­acetate ions have a conformation where the two phenyl rings and the carboxyl­ate group are oriented like the blades of a propeller, each ion having a well defined helicity. The crystal structure of the title compound is achiral, although non‐centrosymmetric (space group ); thus, ions with both (+) and (?) helicities are present in the crystal. Each Na⁺ ion is coordinated by four carboxyl­ate O atoms at distances in the range 2.207 (2)–2.467 (3) Å to form cubes of Na and O atoms which are linked via the carboxyl­ate C atoms into a columnar structure along the rotoinversion axis.     

Di‐μ‐acetato‐bis­[bis(4‐amino­benzoato)(2,2′‐bipyridyl)­manganese(II)]

In the title compound, [Mn₂(C₇H₆NO₂)₂(C₂H₃O₂)₂(C₁₀H₈N₂)₂], the two Mn^II atoms are each coordinated by one 2,2′‐bi­pyridyl mol­ecule, one 4‐amino­benzoate ion and two acetate ions. The two Mn atoms exhibit different coordination environments: one is coordinated by two N and four O atoms, while the other is coordinated by two N and three O atoms. The two Mn atoms are bridged by two acetate ions in a syn–anti mode, with an Mn⋯Mn distance of 4.081 (1) Å.     

Pr4(SeO3)2(SeO4)F6 und NaSm(SeO3)(SeO4): Selenit‐Selenate der Selten‐Erd‐Elemente

Pr₄(SeO₃)₂(SeO₄)F₆ and NaSm(SeO₃)(SeO₄): Selenite‐Selenates of Rare Earth Elements Light green single crystals of Pr₄(SeO₃)₂(SeO₄)F₆ have been obtained from the decomposition of Pr₂(SeO₄)₃ in the presence of LiF in a gold ampoule. The monoclinic compound (C2/c, Z = 4, a = 2230.5(3), b = 710.54(9), c = 835.6(1) pm, β = 98.05(2)°, R_all = 0.0341) contains two crystallographically different Pr³⁺ ions. Pr(1)³⁺ is attached by six fluoride ions and two chelating SeO₃^2– groups (CN = 10), Pr(2)³⁺ is surrounded by four fluoride ions, three monodentate SeO₃^2– and two SeO₄^2– groups. One of the latter acts as a chelating ligand, so the CN of Pr(2)³⁺ is 10. The selenite ions are themselves coordinated by five and the selenate ions by four Pr³⁺ ions. The coordination number of the F^– ions is three and four, respectively. The linkage of the coordination polyhedra leads to cavities in the crystal structure which incorporate the lone pairs of the selenite ions. The reaction of Sm₂(SeO₄)₃ and NaCl in gold ampoules yielded light yellow single crystals of NaSm(SeO₃)(SeO₄). The monoclinic compound (P2₁/c, Z = 4, a = 1066.9(2), b = 691.66(8), c = 825.88(9) pm, β = 91.00(2)°, R_all = 0.0530) contains tenfold oxygen coordinated Sm³⁺ ions. The oxygen atoms belong to five SeO₃^2– and two SeO₄^2– ions. Two of the SeO₃^2– groups as well as one of the SeO₄^2– groups act as a chelating ligand. The sodium ions are surrounded by five SeO₄^2– ions and one SeO₃^2– group. One of the selenate ions is attached chelating leading to a coordination number of seven. Each selenite group is coordinated by six (5 × Sm³⁺ and 1 × Na⁺), each selenate ion by seven cations (5 × Na⁺ and 2 × Sm³⁺).     

Na6(H2O)20(V10O28)·4H2O,a novel polyvanadate(V) with a three‐dimensional framework

The novel title polyvanadate(V), poly[[octa‐μ‐aqua‐dodecaaqua‐μ₄‐octacosaoxidodecavanadato‐hexasodium] tetrahydrate], [Na₆(H₂O)₂₀(V₁₀O₂₈)·4H₂O]_n, contains [V₁₀O₂₈]⁶⁻ anions which lie about inversion centres and have approximate 2/m symmetry and which are linked to [Na₃(H₂O)₁₀]³⁺ cations through two terminal and two μ₂‐bridging O atoms. The structure contains three inequivalent Na⁺ cations, two of which form [Na₂(H₂O)₈]_n chains, which are linked via NaO₆ octahedra involving the third Na⁺ ion, thus forming a three‐dimensional framework.     

Lithium zincopyrophosphate,Li2Zn3(P2O7)2

The title compound, dilithium(I) trizinc(II) bis[diphosphate(4−)], is the first quaternary lithium zincopyrophosphate in the Li–Zn–P–O system. It features zigzag chains running along c, which are built up from edge‐sharing [ZnO₅] trigonal bipyramids. One of the two independent Zn sites is fully occupied, whereas the other is statistically disordered by Zn²⁺ and Li⁺ cations, although the two Zn sites have similar coordination environments. Li⁺ cations occupy a four‐coordinated independent site with an occupancy factor of 0.5, as well as being disordered on the partially occupied five‐coordinated Zn site with a Zn²⁺/Li⁺ ratio of 1:1.     

Bis{μ‐(E)‐2‐[(2‐pyridylamino)(2‐pyridylimino)methyl]benzato}bis[acetatozinc(II)] tetrahydrate

In the C₂‐symmetric dinuclear title complex, [Zn₂(C₁₈H₁₃N₄O₂)₂(C₂H₃O₂)₂]·4H₂O, each Zn^II ion is five‐coordinated in a distorted trigonal bipyramidal fashion by one carboxylate O atom from one benzoate ligand, one imine N atom and two pyridyl N atoms from a second benzoate ligand, and one O atom from an acetate anion. The two Zn atoms are bridged by the two benzoate ligands, forming a dinuclear structure with a 14‐membered macrocycle. Adjacent dinuclear units are further connected by extensive hydrogen bonds involving the solvent water molecules, giving a three‐dimensional hydrogen‐bonded framework. The framework can be regarded as an example of the four‐connected node network of the PtS topology.     

A novel two‐dimensional zinc(II) coordination polymer with 6‐mercaptonicotinic acid

The novel title Zn^II coordination polymer, poly[bis(μ‐6‐thioxo‐1,6‐dihydropyridine‐3‐carboxylato‐κ²S:O)zinc(II)], [Zn(C₆H₄NO₂S)₂]_n, consists of two crystallographically independent zinc centers and two 6‐mercaptonicotinate (Hmna⁻) ligands. Each Zn^II atom is four‐coordinated and lies at the center of a distorted tetrahedral ZnS₂O₂ coordination polyhedron, bridged by four Hmna⁻ ligands to form a two‐dimensional (4,4)‐network. Each Hmna⁻ ion acts as a bridging bidentate ligand, coordinating to two Zn^II atoms through the S atom and a carboxyl O atom. The metal centers reside on twofold rotation axes. The coordination mode of the S atoms and N—H...O hydrogen‐bonding interactions between the protonated N atoms and the uncoordinated carboxyl O atoms give the extended structure a wavelike form.     

Bis(μ‐pyridine‐2,6‐carboxyl­ato‐O,N,O′:O)­bis­[tri­aqua­manganese(II)]–pyridine‐2,6‐di­carboxylic acid (1/2)

In the structure of the title compound, [Mn₂(C₇H₃NO₄)₂(H₂O)₆]·2C₇H₅NO₄, a centrosymmetric dinuclear complex, hexaa­aqua­bis­(pyri­dine‐2,6‐di­carboxyl­ato)­dimanganese(II) and free pyri­dine‐2,6‐di­carboxyl­ic acid are present in a 1:2 ratio. In the complex, each Mn²⁺ ion is coordinated by three O atoms and one N atom from the pyridine‐2,6‐di­carboxyl­ate ligands and by three water O atoms, resulting in a distorted pentagonal bipyramidal coordination. Within the centrosymmetric dinuclear complex, two Mn²⁺ ions are bridged by two carboxyl­ate O atoms. The crystal structure is stabilized by hydrogen bonds involving all the H atoms of the water ligands.