Oxazolidin-2-one-containing pseudopeptides that fold into beta-bend ribbon spirals

Three sets of oligomers containing the 4-carboxy-5-methyloxazolidin-2-one (Oxd) moiety have been synthesized with the aim of checking whether these molecules are able to fold in ordered structures: A set [Boc-(L-Ala-L-Oxd)(n)-OR], B set [Boc-(L-Ala-D-Oxd)(n)-OR], and C set [Boc-(Aib-L-Oxd)(n)-OR] preferential conformations have been analyzed with IR absorption, NMR, and CD. We have noticed that in these oligomers three stabilizing effects are active: (i) the rigid Oxd -CO-N(CH<)-CO- moiety, which always tend to assume a trans conformation; (ii) the formation of Oxd C=O...H-(alpha)C intramolecolar H-bonds; (iii) the alternate formation of 1 <-- 4 intramolecular C=O...H-N H-bonds. Through the analysis of the experimental data, we could demonstrate that only the oligomers of the B set are able to meet all three requirements listed above. By a deeper insight into the CD spectra, we gathered that the secondary structure adopted by the B set oligomers is a beta-bend ribbon spiral, which is a subtype of the 3(10)-helix.     

Aggregation modes in sheets formed by protected beta-amino acids and beta-peptides

The crystal structures of four protected beta-amino acid residues, Boc-(S)-beta3-HAla-NHMe (1); Boc-(R)-beta3-HVal-NHMe (2); Boc-(S)-beta3-HPhe-NHMe (3); Boc-(S)-beta3-HPro-OH (6) and two beta-dipeptides, Boc-(R)-beta3-HVal-(R)-beta3-HVal-OMe (4); Boc-(R)-beta3-HVal-(S)-beta3-HVal-OMe (5) have been determined. Gauche conformations about the C(beta)-C(alpha) bonds (theta approximately +/-60 degrees) are observed for the beta3-HPhe residues in and all four beta3-HVal residues in the dipeptides and . Trans conformations (theta is approximately 180 degrees) are observed for beta3-HAla residues in both independent molecules in and for the beta3-HVal and beta3-HPro residues in and , respectively. In the cases of compounds , molecules associate in the crystals via intermolecular backbone hydrogen bonds leading to the formation of sheets. The polar strands formed by beta3-residues aggregate in both parallel (1,3,5) and antiparallel (2,4 fashion. Sheet formation accommodates both the trans and gauche conformations about the C(beta)-C(alpha) bonds.     

Geometry, dipole moment, polarizability and first hyperpolarizability of polymethineimine: an assessment of electron correlation contributions

We have investigated the geometries as well as the longitudinal dipole moment (micro), polarizability (alpha), and first hyperpolarizability (beta) of polymethineimine oligomers using different approaches [Hartree-Fock (HF), second-order M?ller-Plesset (MP2), and hybrid density functional theory (DFT) methods (B3LYP and PBE0)] for evaluating the geometries and the nonlinear optical properties. It turns out that (i) HF and the selected DFT methods provide the incorrect sign for beta of short and medium size oligomers. (ii) The B3LYP and PBE0 electron correlation correction are too small for micro, too large for alpha, and for some oligomer lengths, they are in the wrong direction for beta. (iii) On the contrary to polyacetylene, the hybrid-DFT geometries are in poor agreement with MP2 geometries; the former showing much smaller bond length alternations.     

Conformational studies of Phe-rich foldamers by VCD spectroscopy and ab initio calculations

Employing VCD spectroscopy, we demonstrate that the structural behavior of the oligomers Boc-(L-Phe-L-Oxd)(n)-OBn is similar from n = 2 to n = 6; ab initio calculations for the n = 1 case provide physical insight into the conformational properties. Further information is gained by IR, (1)H NMR, and ECD spectroscopies. ECD spectra suggest the presence of different conformations between n = 1 on one side and longer chain foldamers on the other side. VCD and absorption IR spectra in methanol solutions can be interpreted as indicative of a PPII structure. In the case of Boc-L-Phe-L-Oxd-OBn, VCD spectra in CCl(4) and detailed DFT computational analysis allow one to demonstrate that the most populated conformers exhibit backbone dihedral angles similar to those of a PPII geometry. This is a remarkable outcome, as we had previously demonstrated that the Boc-(L-Ala-D-Oxd)(n)-OBn series folds in a β-band ribbon spiral that is a subtype of the 3(10) helix.     

(alpha/beta+alpha)-peptide antagonists of BH3 domain/Bcl-x(L) recognition: toward general strategies for foldamer-based inhibition of protein-protein interactions

The development of molecules that bind to specific protein surface sites and inhibit protein-protein interactions is a fundamental challenge in molecular recognition. New strategies for approaching this challenge could have important long-term ramifications in biology and medicine. We are exploring the concept that unnatural oligomers with well-defined conformations ("foldamers") can mimic protein secondary structural elements and thereby block specific protein-protein interactions. Here, we describe the identification and analysis of helical peptide-based foldamers that bind to a specific cleft on the anti-apoptotic protein Bcl-xL by mimicking an alpha-helical BH3 domain. Initial studies, employing a fluorescence polarization (FP) competition assay, revealed that among several alpha/beta- and beta-peptide foldamer backbones only alpha/beta-peptides intended to adopt 14/15-helical secondary structure display significant binding to Bcl-xL. The most tightly binding Bcl-xL ligands are chimeric oligomers in which an N-terminal alpha/beta-peptide segment is fused to a C-terminal alpha-peptide segment ((alpha/beta + alpha)-peptides)). Sequence-affinity relationships were probed via standard and nonstandard techniques (alanine scanning and hydrophile scanning, respectively), and the results allowed us to construct a computational model of the ligand/Bcl-xL complex. Analytical ultracentrifugation with a high-affinity (alpha/beta + alpha)-peptide established 1:1 ligand:Bcl-xL stoichiometry under FP assay conditions. Binding selectivity studies with the most potent (alpha/beta + alpha)-peptide, conducted via surface plasmon resonance measurements, revealed that this ligand binds tightly to Bcl-w as well as to Bcl-xL, while binding to Bcl-2 is somewhat weaker. No binding could be detected with Mcl-1. We show that our most potent (alpha/beta + alpha)-peptide can induce cytochrome C release from mitochondria, an early step in apoptosis, in cell lysates, and that this activity is dependent upon inhibition of protein-protein interactions involving Bcl-xL.     

Synthesis, electronic, and photophysical properties of cruciform OPE/OPV hybrid oligomer bridged bisfullerene triads

A series of cruciform-shaped phenyleneethynylene and phenylenevinylene hybrid oligomers was prepared via a sequence of Sonogashira reactions. Using an in situ ethynylation protocol, these oligomers were end-functionalized with bis(fullerenyl) groups at the termini of the oligomers. Spectroscopic and electrochemical properties of these novel bisfullerene triads were studied in detail by UV-vis, fluorescence, and cyclic voltammetric analyses, and the results of these investigations are reported.     

Design of a "new motif" with beta-amino acids and alpha-aminoxy acids: synthesis of hybrid peptides with 12/10-helix

Hybrid peptides are prepared from a C-linked carbo-beta-amino acid ester (R-beta-Caa) and an alpha-aminoxy acid (R-Ama) derived from S-lactic acid. Extensive NMR (in CDCl 3 solution), CD, and MD studies on the tetra- and hexapeptides led to identification of robust 12/10-mixed helices. The dipeptide repeat having an R-beta-Caa and an R-Ama thus provides a "new motif" to realize a 12/10-mixed helix, for the first time, in oligomers containing R-Ama. To understand the impact of side chains in the mixed helix formation, R-beta-Caa/Ama (with no substitution in Ama) and S-beta-hAla/R-Ama oligomers were investigated. NMR studies revealed the existence of 12/10-helices in these hybrid peptides, and the side chains of monomers were found to have a profound influence on their stabilities. These observations imply that the propensity of beta-amino acid to prefer a mixed 12/10-helix governs the structural behavior in these peptides. The structural consequences of the lone-pair repulsion between nitrogen and oxygen atoms result in a new and interesting structural motif which behaves like "pseudo" beta (3),beta(2)-peptides in generating 12/10-mixed helices.     

Building blocks for N-type molecular and polymeric electronics. Perfluoroalkyl- versus alkyl-functionalized oligothiophenes (nTs; n = 2-6). Systematic synthesis, spectroscopy, electrochemistry, and solid-state organization

The synthesis, comparative physicochemical properties, and solid-state structures of five oligothiophene (nT) series differing in substituent nature and attachment, regiochemistry, and oligothiophene core length (n) are described. These five series include the following 25 compounds: (i) alpha,omega-diperfluorohexyl-nTs 1 (DFH-nTs, n = 2-6), (ii) beta,beta'-diperfluorohexyl-nTs 2 (isoDFH-nTs, n = 2-6), (iii) alpha,omega-dihexyl-nTs 3 (DH-nTs, n = 2-6), (iv) beta,beta'-dihexyl-nTs 4 (isoDH-nTs, n = 2-6), and (v) unsubstituted oligothiophenes 5 (alphanTs, n = 2-6). All new compounds were characterized by elemental analysis, mass spectrometry, and multinuclear NMR spectroscopy. To probe and address quantitatively how the chemistry and regiochemistry of conjugated core substitution affects molecular and solid-state properties, the entire 1-5 series was investigated by differential scanning calorimetry, thermogravimetric analysis, and optical absorption and emission spectroscopies. Single-crystal X-ray diffraction data for several fluorocarbon-substituted oligomers are also presented and compared. The combined analysis of these data indicates that fluorocarbon-substituted nT molecules strongly interact in the condensed state, with unit cell level phase separation between the aromatic core and fluorocarbon chains. Surprisingly, despite these strong intermolecular interactions, high solid-state fluorescence efficiencies are exhibited by the fluorinated derivatives. Insight into the solution molecular geometries and conformational behavior are obtained from analysis of optical and variable-temperature NMR spectra. Finally, cyclic voltammetry data offer a reliable picture of frontier MO energies, which, in combination with DFT computations, provide key information on relationships between oligothiophene substituent effects and electronic response properties.     

Synthesis of novel fluoroalkyl end‐capped oligomers/silica gel polymer hybrids possessing antibacterial activity

New fluoroalkyl end‐capped oligomers/silica gel polymer hybrids‐low‐molecular weight biocide (hibitane) composites were prepared by the reactions of tetraethoxysilane (TEOS) with fluoroalkyl end‐capped N‐(1,1‐dimethyl‐3‐oxobutyl)acrylamide oligomer, N,N‐dimethylacrylamide oligomers, and acrylic acid oligomers in methanol under acidic conditions at room temperature. The presence of hibitane in the composites was clarified by the use of elementary analyses of nitrogen in fluorinated acrylic acid oligomer composite and thermogravimetric analysis (TGA) of these fluorinated composites. Thermal stability of fluorinated composites thus obtained were found to increase significantly compared to those of the parent fluorinated oligomers. Thermal stability of fluorinated N,N‐dimethylacrylamide oligomer, acrylic acid oligomer/silica gel polymers hybrid‐hibitane composites decreased compared to those of the corresponding fluorinated oligomers/silica gel polymer hybrids; however, the thermal stability of fluorinated N‐(1,1‐dimethyl‐3‐oxobutylacryl)amide oligomer/silica gel polymer hybrid‐hibitane composite increased significantly compared to that of the corresponding fluorinated oligomer hybrid. The sol methanol solutions of these fluorinated composites were applied to the surface modification of glass to exhibit not only a strong oleophobicity imparted by end‐capped fluoroalkyl groups in oligomers but also a good hydrophilicity on the glass surface. Fluorinated oligomers/silica gel polymer hybrids‐hibitane composites were found to exhibit high anti‐bacterial activity against Pseudomonas aeruginosa and Staphylococcus aureus. Therefore, these fluorinated hibitane composites are suggested to have high potential for new attractive functional materials through not only their excellent surface active property imparted by fluorine and their thermal stability but also through their anti‐bacterial activity. Copyright © 2005 John Wiley & Sons, Ltd.     

Electrospray ionization mass spectrometric investigation of ammonium ion complexes with anomeric 2,3-O-isopropylidene-1alpha- and -1beta-D-ribofuranosyl azides: anomeric and kinetic isotope effects in ammonium affinities.

[Methanol + ammonium acetate] solutions of anomeric 2,3-O-isopropylidene-1alpha- and 1beta-ribofuranosyl azides were investigated by electrospray ionization mass spectrometry (ESI-MS). The compounds included d6-labeled and/or unlabeled isopropylidene groups that enable the identification of peaks characteristic of the ammonium-attached monomeric (MNH4(+)), ammonium-bound homodimeric ([M]2NH4(+)) and heterodimeric ([MNH4M1](+)) complex ions in ESI mass spectra of solutions of a pair of compounds. The intensities of the product ion peaks obtained by the collisionally activated ammonium-bound dimeric ions are related to the secondary isotope effect k(alpha)/k(alphad6) = 0.88 and k(beta)/k(betad6) = 1.25 or to isotope plus anomeric effects k(alpha)/k(betad6) = 1.43 and k(beta)/k(alphad6) = 0.59 in the ammonium affinities of these compounds. The calculations of solely anomeric effects in the ammonium affinities of alpha and beta anomeric compounds obtained from the data presented previously give two series of values: k(alpha)/k(beta) = (k(alpha)/k(alphad6))(k(alphad6)/k(beta)) = 1.49 and k(alphad6)/k(betad6) = (k(alphad6)/k(beta))(k(beta)/k(betad6)) = 2.12 or k(alpha)/k(beta) = (k(alpha)/k(betad6))(k(betad6)/k(beta)) = 1.14 and k(alphad6)/k(betad6) = (k(alphad6)/k(alpha))(k(alpha)/k(betad6)) = 1.63. The disparities of these results indicate the different structures of hydrogen bonding in ammonium-bound dimeric complexes which decompose to monomeric ions with different rate constants. Comparison of experimental results obtained by the qualitative approach of the kinetic method and ammonium affinities of these compounds calculated by the semi-empirical molecular orbital method (AM1) show that the [MNH4M1](+) dimeric complex ions dissociate to the most stable MNH4(+) and M1NH4(+) monomeric ions. The obtained relative order of ammonium affinities of these compounds is: alphad6 > alpha > beta > betad6.     

富勒烯与β淀粉样肽低聚体结合的分子动力学模拟

本文通过分子动力学模拟研究富勒烯在Aβ42 低聚体表面的结合过程. 在结合过程中,C₆₀在Aβ表面经历一系列尝试过程,最终找到某个稳定的结合位点. 根据结合的残基不同,这些结合位点可以分为六类,其中核心疏水区域（CHC）位点（¹⁷LVFFA²¹）及Turn 27-31 位点（²⁷NKGAI³¹）具有最强的结合稳定性. 二者的结合主要通过范德华作用稳定,而溶剂化效应则起相反作用. 在这六类位点中的两个位点,观察到C₆₀会对Aβ二级结构起破坏作用. 其一位于核心疏水区域,C₆₀有挤入多肽β片层中间的趋势;另外一位点位于N端,C₆₀能够破坏外侧Aβ的3-5 号残基的主链氢键,瓦解其末端的β片结构. 这两个过程对理解富勒烯抑制Aβ聚集的微观机制提供了帮助. 此外,在Turn 27-31 位点以及Y10-H14 位点,发现了富勒烯与Aβ纤维样聚集体结合的沟槽滚动机制,即富勒烯能够在淀粉样低聚体表面形成的特定沟槽内滚动. 这一特征有助于预测富勒烯在其它淀粉样多肽表面的结合位点及结合行为.     

Physical organic chemistry of transition metal carbene complexes. 24. Thermodynamic and kinetic acidities of phenyl-substituted (benzylmethoxycarbene)pentacarbonylchromium(0) complexes. Is there a transition-state imbalance?

A kinetic study of the reversible deprotonation of phenyl-substituted (benzylmethoxycarbene)pentacarbonylchromium(0) complexes by OH(-) and by a series of primary aliphatic and a series of secondary alicyclic amines in 50% MeCN-50% water (v/v) at 25 degrees C is reported. Br?nsted alpha(CH) values (dependence on carbene complex acidity) and beta(B) values (dependence on amine basicity) were determined. According to current notions about proton transfers involving carbon acids activated by pi-acceptors, alpha(CH) was expected to substantially exceed beta(B), the result of transition-state imbalances that are characteristic of such reactions. However we find that alpha(CH) and beta(B) have essentially the same values, which are close to 0.5. It is shown that these findings do not indicate the absence of an imbalance but rather suggest that the manifestation of the imbalance is masked by the pi-donor effect (3H-Z <--> 3H-Z(+/-)) of the methoxy group.     

Optical and redox properties of a series of 3,4-ethylenedioxythiophene oligomers

The optical and redox properties of a series of 3,4-ethylenedioxythiophene oligomers (EDOTn, n=1-4) and their beta,beta'-unsubstituted analogues (Tn, n=1-4) are described. Both series are end capped with phenyl groups to prevent irreversible alpha-coupling reactions during oxidative doping. Absorption and fluorescence spectra of both series reveal a significantly higher degree of intrachain conformational order in the EDOTn oligomers. Oxidation potentials (E(PA1) and E(PA2)) determined by cyclic voltammetry reveal that those of EDOTn are significantly lower than the corresponding Tn oligomers as a consequence of the electron-donating 3,4-ethylenedioxy substitution. Linear fits of E(PA1) and E(PA2) versus the reciprocal number of double bonds reveal significantly steeper slopes for the EDOTn than for the Tn oligomers. This could indicate a more effective conjugation for the EDOTn series, confirmed by the fact that coalescence of E(PA1) and E(PA2) is reached already at relatively short chain lengths ( approximately 5 EDOT units) in contrast to the Tn series (>10 thiophene units). The stepwise chemical oxidation of the EDOTn and Tn oligomers in solution was carried out to obtain radical cations and dications. The energies of the optical transitions of the radical cations and dications as determined by UV/Vis/NIR spectroscopy were similar for the two series. These spectroscopic observations are consistent with quantum-chemical calculations performed on the singly charged molecules. Cooling solutions containing T2.+, T3.+, EDOT2.+, and EDOT3.+ revealed the reversible formation of dimers, albeit with a somewhat different tendency, expressed in the values for the dimerization enthalpy.     

Structural preferences of two unnatural hybrid octapeptides with and without the crystal environment: a computational study

A computational study by combining molecular dynamics simulations with density functional theory calculations has been conducted on two unnatural octapeptides, Boc-[Aib-β³(R)Val]₄-OMe and Boc-[Aib-α(S)Val]₄-OMe, and the corresponding infinite one-dimensional chains to understand their inherent structural preferences and the effect of the crystal environment on their structures. For both systems, we have determined their gas-phase lowest energy conformers, which possess hybrid helical structures (not pure α-helix-like or 3₁₀-helix-like). For Boc-[Aib-β³(R)Val]₄-OMe, our calculations show that the corresponding infinite polypeptide has an α-helix-like structure as the most stable structure. This result is in accord with the experimental crystal structure. For Boc-[Aib-α(S)Val]₄-OMe, our calculations show that the infinite polypeptide will exist in 3₁₀-helix-like structure, which is also consistent with the observed crystal structure. The present study demonstrates that the peptide conformer in the crystal environment does not necessarily correspond to the most stable structure in vacuum.     

Hybrid organosilazane/organosilylamine telechelic oligomers—I. Two-dimensional NMR spectroscopy characterization of dimethylsilylethylenediamine oligomers

The detailed characterization of multifunctional hybrid organosilazane/organosilylamine telechelic oligomers by IR and ¹H, ¹³C and ²⁹Si NMR spectroscopy in one and two dimenions has been undertaken. The specific multifunctional oligomers, comprising NH/NH₂ or SiCl functionalities depending on the monomer feed-ratio, were prepared from mono- and di-functionally reacted dichlorodimethylsilane (DDS) and mono-, di-, tri- and tetra-functionally reacted ethylenediamine (EDA). Varying the feed-ratio afforded control of the microstructures of the oligomers and the preparation of oligomers with, in some cases, conterminously located silicon–chlorine (SiCl) groups. The combination of the NMR methods with the IR technique has enabled the detailed microstructural characterization of the oligomers and the identification of the functionalities therein. This approach and the knowledge gained from the DDS/EDA system has been applied to the microstructural characterization of other hybrid organosilazane/silylamine preceramic telechelic oligomers.     

Single molecule conductance of porphyrin wires with ultralow attenuation

A series of thioacetate-terminated butadiyne-linked porphyrin oligomers have been synthesized with one to three porphyrin repeat units. Single molecule electrical scanning tunneling microscopy measurements using the I(s) and I(t) methods were used to determine the molecule conductances for this series of oligomers. The molecular conductance shows an exponential falloff with sulfur-sulfur distance with a remarkably low attenuation factor of beta = (0.04 +/- 0.006) A-1.     

Synthesis of Chiral beta 3-aminoxy peptides

A series of chiral beta(3)-aminoxy acids or amides with various side chains have been synthesized via two different approaches. One is the Arndt-Eistert homologation approach, using chiral alpha-aminoxy acids as starting materials. The other approach, utilizing the enantioselective reduction of beta-keto esters catalyzed by baker's yeast or chiral Ru(II) complexes, produces chiral beta(3)-aminoxy acids with nonproteinaceous side chains. The oligomers of beta(3)-aminoxy acids can be readily prepared using EDCI/HOAt as the coupling reagent.     

Interactions between spiropyrans and room-temperature ionic liquids: photochromism and solvatochromism

A series of imidazolium-based room-temperature ionic liquids (RTILs) containing anions from organic carboxylic acids were prepared. A set of dye probes, including Reichardt's dye (30), 4-nitrioaniline, and N, N-diethyl-4-nitroaniline, were used to determine the ET(30) scales and the Kamlet-Taft parameters (pi*, alpha, and beta) of the RTILs. On the basis of the polarity properties, these RTILs were categorized into three groups: group A with beta >0.9, alpha <0.9; group B with beta <0.9, alpha <0.9; and group C with beta <0.9, alpha >0.9. Interactions of these RTILs with four photochromic spiropyran derivatives (SP-I, SP-II, SP-III, and SP-IV) were investigated. It was found that the spiropyrans could present photochromism (positive or negative) or not, depending mainly on the polarity properties of the RTILs and also on the structure itself. A new spectroscopic method based on the molecular transition energy of the spiropyran probes (ESP) was proposed to determine the polarity of those protic or fluorine-containing RTILs, which were failed with the Reichardt's dye (30) probe.     

Redox states and associated interchain processes of thienylenevinylene oligomers

The electronic structure of successive redox states of two series of thienylenevinylene oligomers (nTVs, n=4, 5, 6, 8, and 12) that carry hexyl substituents at the alpha- or beta-positions in order to increase the solubility was investigated in detail by means of UV/ Vis/near-IR and ESR spectroscopy in solution. The nTV redox states have been fully characterized up to the dication for the shorter oligomers (n < or = 6) and up to the tetracation for the longer oligomers (n > or = 8). While the monocation radicals of the nTVs exhibit two dipole-allowed electronic transitions in the Vis/near-IR region, all the higher oxidized states invariably show a single strong absorption in the near-IR region. The electronic transitions of the various oxidized states and those of their vibronic replicas shift to lower energies with increasing conjugation length. The ESR spectra, recorded as a function of the degree of oxidation, provide evidence for the presence of electron spin in the odd-charged and the absence of spin in even-charged cations. Variable-temperature UV/Vis/near-IR and ESR spectroscopy establish that the tendency of the nTV monocation radicals to form spin-less alpha dimers in solution strongly depends on the number of solubilizing hexyl groups. While the oligomers that carry two hexyl chains at the a-positions of the terminal thiophenes (alpha-nTVs) readily form pi dimers at low temperature, the oligomers that carry hexyl groups on the beta- and beta'-positions of every thiophene ring (beta-nTVs) do not form pi dimers. Low-temperature UV/ Vis/near-IR and ESR experiments on solutions in which neutral and singly oxidized nTVs are simultaneously present, reveal the occurrence of interchain interactions between these two species, accompanied by a pronounced change in the existing disproportionation equilibrium.     

Electrospray tandem mass spectrometry of alkali-cationized BocN-carbo-alpha,beta- and -beta,alpha-peptides: Differentiation of positional isomers

Dissociation pathways of a series of alkali-cationized hybrid peptides, viz., Boc-alpha,beta- and -beta,alpha-carbopeptides, synthesized from C-linked carbo-beta3-amino acids [Caa (S)] and alpha-alanine (L-Ala), have been investigated by electrospray ionization tandem mass spectrometry. The positional isomers (six pairs) of the cationized alpha,beta- and beta,alpha-peptides can be differentiated by the collision-induced dissociation (CID) spectra of their [M + Cat-Boc + H]+ ions which give characteristic series of alkali-cationized C- (x(n)+, y(n)+, z(n)+) and N-terminal (a(n)+, b(n)+, c(n)+) ions. Another noteworthy difference is cationized beta,alpha-peptides eliminate a molecule of ammonia whereas this pathway is absent for alpha,beta-peptides. This is useful for identifying the presence of a beta-amino acid at the N-terminus. The CID spectra of [M + Cat-Boc + H]+ ions of these peptide acids show abundant rearrangement [b(n) + 17 + Cat]+ (n = 1 to n-1) ions which is diagnostic for distinguishing between alpha- and beta-amino acid at the C-terminus. MS(n) experiments of [b(n) + Li-H]+ ions from these hybrid peptides showed the loss of CO and 72 u giving rise to [a(n) + Li-H]+ and cationized nitrile product ions which render support to earlier proposals that b(n)+ or [b(n) + Cat-H]+ ions have protonated or cationized oxazolinone structures, respectively.