From Peptide Nucleic Acids to Supramolecular Structures of Nucleic Acid Derivatives

Nucleic acids play a pivotal role in life processes. The endeavours to shed light on the essential properties of these intriguing building blocks led us to the synthesis of different analogues and the investigation of their properties. First various peptide nucleic acid monomers and oligomers have been synthesized, using an Fmoc/acyl protecting group strategy, and their properties studied. The serendipitous discovery of a side reaction of coupling agents led us to the elaboration of a peptide sequencing method. The capricious behaviour of guanine derivatives spurred the determination of their substitution pattern using ¹³C, ¹⁵N NMR, and mass spectrometric methods. The properties of guanines initiated the logical transition to the study of supramolecular systems composed of purine analogues. Thus, xanthine and uracil derivatives have been obtained and their supramolecular self-assembly properties scrutinized in gas, solid, and liquid states and at solid-liquid interfaces.     

Melanin Biopolymers: Tailoring Chemical Complexity for Materials Design

Melanins, a group of dark insoluble pigments found widespread in nature, have become the focus of growing interest in materials science for various biomedical and technological applications, including opto‐bioelectronics, nanomedicine and mussel‐inspired surface coating. Recent progress in the understanding of melanin optical, paramagnetic redox, and conductivity properties, including photoconductivity, would point to a revision of the traditional concept of structural disorder in terms of more sophisticated and interrelated levels of chemical complexity which however have never been defined and codified. Herein, we bring to focus the various levels of structural disorder that emerged from spectral and chemical signatures over the past decade. A revised approach to structure–property relationships in terms of intermolecular interactions is also provided that may pave the way towards the rational design of next‐generation melanin‐based functional materials.     

Deep Eutectic Supramolecular Polymers: Bulk Supramolecular Materials

Application of new strategies for supramolecular self‐assembly can significantly impact the properties and/or functions of supramolecular polymers. To realize a facial strategy for the development of solvent‐free supramolecular polymers in bulk, “deep eutectic solvents” were employed. Cyclodextrins and natural acids were used to prepare deep eutectic supramolecular polymers ( DESP s). Deep eutectic solvents have special characteristics that endow DESP s with unique macroscopic properties and excellent processability. DESP s exhibit supramolecular adhesion and temperature‐dependent behavior originating from the combined effects of deep eutectic solvents and supramolecular polymerization. Because DESP s are solvent‐free and display interesting macroscopic properties, they have potential as new adaptive materials.     

Sequential Assembly of Mutually Interactive Supramolecular Hydrogels and Fabrication of Multi-Domain Materials

A two-component self-sorting hydrogel based on acylhydrazide and carboxylic acid derivatives of 1,3:2,4-dibenzylidene-d -sorbitol (DBS-CONHNH₂ and DBS-COOH) is reported. A heating–cooling cycle induces the self-assembly of DBS-CONHNH₂, followed by the self-assembly of DBS-COOH induced by decreasing pH. Although the networks are formed sequentially, there is spectroscopic evidence of interactions between them, which impact on the mechanical properties and significantly enhance the ability of these low-molecular-weight gelators (LMWGs) to form gels when mixed. The DBS-COOH network can be switched “off” and “on” within the two-component gel through a pH change. By using a photo-acid generator, the two-component gel can be prepared combining the thermal trigger with photo-irradiation. Photo-patterned self-assembly of DBS-COOH within a pre-formed DBS-CONHNH₂ gel under a mask yields spatially controlled multi-domain gels. Different gel domains can have different functions, for example, controlling the rate of release of heparin incorporated into the gel, or directing gold nanoparticle assembly. Such photo-patterned multi-component hydrogels have potential applications in regenerative medicine or bio-nano-electronics.     

Hierarchy of Asymmetry in Chiral Supramolecular Polymers: Toward Functional,Helical Supramolecular Structures

The formation of helical structures through the supramolecular polymerization of a variety of self-assembling units is reviewed. These scaffolds are usually obtained by efficient transfer or amplification of chirality phenomena, in which the starting self-assembling molecules possess different elements of asymmetry, such as point or axial chirality. Relevant examples of helical supramolecular structures investigated under thermodynamic control are reviewed, and the helical outcome of remarkable examples of chiral entities obtained through kinetic control are also highlighted. Finally, selected examples of flexible macroscopic chirality and catalysis are described to illustrate the applicability of helical aggregates.     

环糊精超分子组装体与核酸的相互作用

环糊精是一类由6～8个D-型葡萄糖连接而成的环聚多糖分子,目前已广泛应用于化学和生物学的许多领域.综述了一些生物活性的环糊精超分子组装体,如环糊精假聚轮烷、环糊精/金纳米粒子组装体、环糊精/富勒烯组装体、环糊精/碳纳米管组装体等的构筑及其与核酸的相互作用,如对核酸的切割、凝聚、传递作用和对核酸酶的抑制作用等方面的研究进展.     

Self‐Assembly of Proteins: Towards Supramolecular Materials

The study of protein self‐assembly has attracted great interest over the decades, due to the important role that proteins play in life. In contrast to the major achievements that have been made in the fields of DNA origami, RNA, and synthetic peptides, methods for the design of self‐assembling proteins have progressed more slowly. This Concept article provides a brief overview of studies on native protein and artificial scaffold assemblies and highlights advances in designing self‐assembling proteins. The discussions are focused on design strategies for self‐assembling proteins, including protein fusion, chemical conjugation, supramolecular, and computational‐aided de novo design.     

Long,Multicenter Bonding—A New Concept for Supramolecular Materials

A new concept for constructing supramolecular architectures is discussed. In addition to van der Waals and hydrogen‐bonding intermolecular interactions that primarily account for supramolecular structures for all materials lacking extended 3D network structures, directional, long, multicenter bonding that can occur for anionic, cationic, neutral, and zwitterionic radicals and can direct intermolecular recognition through π interactions and form extended network supramolecular structural motifs.     

Hybrid Soft Nanomaterials Composed of DNA Microspheres and Supramolecular Nanostructures of Semi-artificial Glycopeptides

Aqueous hybrid soft nanomaterials consisting of plural supramolecular architectures with a high degree of segregation (orthogonal coexistence) and precise hierarchy at the nano- and microscales, which are reminiscent of complex biomolecular systems, have attracted increasing attention. Remarkable progress has been witnessed in the construction of DNA nanostructures obtained by rational sequence design and supramolecular nanostructures of peptide derivatives through self-assembly under aqueous conditions. However, orthogonal self-assembly of DNA nanostructures and supramolecular nanostructures of peptide derivatives in a single medium has not yet been explored in detail. In this study, DNA microspheres, which can be obtained from three single-stranded DNAs, and three different supramolecular nanostructures (helical nanofibers, straight nanoribbons, and flowerlike microaggregates) of semi-artificial glycopeptides were simultaneously constructed in a single medium by a simple thermal annealing process, which gives rise to hybrid soft nanomaterials. Fluorescence imaging with selective staining of each supramolecular nanostructure uncovered the orthogonal coexistence of these structures with only marginal impact on their morphology. Additionally, the biostimuli-responsive degradation propensity of each supramolecular architecture is retained, and this may allow the construction of active soft nanomaterials exhibiting intelligent biofunctions.     

Supramolecular polymer gels formed from polyamidine and random copolymer of n-butyl acrylate and acrylic acid

We have prepared the amidinium-carboxylate salt bridge-based supramolecular polymer gels from random copolymer of n-butyl acrylate and acrylic acid and a linear polyamidine having N,N′-di-substituted acetamidine group in the main chain. The supramolecular polymer gel with equimolar amounts of carboxy and amidine groups shows a high G′ value of 1.6 MPa at 25°C. In contrast, the gel prepared from the carboxy polymer and linear polyethyleneimine instead of the polyamidine shows liquid-like fluidity with a G′ value of 0.01 MPa at 25°C. The robustness of the amidine-based supramolecular polymer gels is attributed to the high stability of the amidinium-carboxylate salt bridge. Replacing the random copolymer with carboxy-terminated telechelic poly(n-butyl acrylate) results in a significant decrease in G′ as well as |η*|, which may arise from the difference in the network structure due to the arrangement of carboxy groups.     

Supramolecular polymers based on cyclodextrins

Two types of supramolecular polymers based on cyclodextrins were prepared. One was a host–guest type, and the other was a polyrotaxane type. When a guest part was covalently attached to cyclodextrin, they formed supramolecular dimers, a cyclic daisy chain, supramolecular oligomers, and polymers. t-Boc-cinnamamide-α-cyclodextrin was found to form chiral supramolecular polymers in aqueous solutions. Supramolecular poly[2]rotaxane polymers and supramolecular α,β-cyclodextrin copolymers were obtained. Polyrotaxanes containing β-cyclodextrin or γ-cyclodextrin were prepared. © 2006 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 44: 5113–5119, 2006     

Multistimuli‐Responsive,Moldable Supramolecular Hydrogels Cross‐Linked by Ultrafast Complexation of Metal Ions and Biopolymers

A new type of multistimuli‐responsive hydrogels cross‐linked by metal ions and biopolymers is reported. By mixing the biopolymer chitosan (CS) with a variety of metal ions at the appropriate pH values, we obtained a series of transparent and stable hydrogels within a few seconds through supramolecular complexation. In particular, the CS–Ag hydrogel was chosen as the model and the gelation mechanism was revealed by various measurements. It was found that the facile association of Ag⁺ ions with amino and hydroxy groups in CS chains promoted rapid gel‐network formation. Interestingly, the CS–Ag hydrogel exhibits sharp phase transitions in response to multiple external stimuli, including pH value, chemical redox reactions, cations, anions, and neutral species. Furthermore, this soft matter showed a remarkable moldability to form shape‐persistent, free‐standing objects by a fast in situ gelation procedure.     

Supramolecular Nanocycles Comprising β‐Cyclodextrin‐click‐Ferrocene Units: Rings of Rings of Rings

We applied 1,3‐dipolar cycloaddition to bind ethynylferrocene onto 6I‐azido‐6I‐deoxycyclomaltoheptaose under microwave assisted conditions. The process was investigated by ¹H NMR, FT‐IR spectroscopy, and MALDI‐TOF mass spectrometry. The ability of the synthesized compound to self‐organize to cyclic supramolecular structures was investigated by dynamic light scattering measurements and cryo‐transmission electron microscopy.

     

The Supramolecular Assembly of Porphyrin Arrays

The self-assembly of porphyrin arrays containing three, seven or eleven porphyrins results from the interaction of the bis-pyridyl porphyrin 1 with the zinc porphyrins 2, 3, or 4, respectively.     

超分子凝胶在催化有机反应中的应用

超分子凝胶是有机小分子通过分子间非共价作用形成的使溶剂固定的三维网络结构胶体。 综述关注了近年来超分子凝胶在催化有机反应中一个新的应用方向,依据凝胶剂结构特征和催化反应的类型对迄今报道的小分子凝胶催化剂进行了深入的总结与归类,揭示凝胶催化的独特性,并对其存在的问题和发展趋势进行了讨论。     

超分子环糊精两亲分子

本文综述了“超分子环糊精两亲分子”的最新研究进展。超分子环糊精两亲分子主要包括疏水性修饰的环糊精衍生物(第一类)、环糊精衍生物与两亲分子的包合物(第二类)和环糊精衍生物与疏水性客体分子的包合物(第三类)。针对超分子环糊精两亲分子及其自组装体系的研究不但丰富了由诺贝尔化学奖得主Lehn等所提出的超分子化学的内涵,实现了多学科的交叉,而且在生物模拟、智能材料以及可控的、具有疗效的药物输运与缓释等领域具有潜在的应用前景。     

New Penta(tetrathiafulvalenyl)[60]fullerenes for Supramolecular Materials

New penta(organo)fullerenes donor–acceptor systems bearing five tetrathiafulvalene recognition units have been synthesized to promote self‐assemblies similar in appearance to shuttlecocks nested into each other thanks to the conical host cavity created around the fullerene together with the π–π and electronic interactions.     

Biocomplementary interaction behavior in DNA‐like and RNA‐like polymers

A series of nucleobased polymers and copolymers were synthesized through atom transfer radical polymerization (ATRP). Biocomplementary DNA‐ and RNA‐like supramolecular complexes are formed in dilute DMSO solution through nucleobase recognition. ¹H NMR titration studies of these complexes in CDCl₃ indicated that thymine‐adenine (T‐A) and uracil‐adenine (U‐A) complexes form rapidly on the NMR time scale with high association constants (up to 534 and 671 M^–1, respectively) and result in significant T_g increase. WAXD and differential scanning calorimetry analyzes in the bulk state indicate the presence of highly physical cross‐linked structures and provide further details into the nature of the self‐assembly of these systems. Furthermore, this study is of discussion on the difference in the hydrogen bond strength between T‐A and U‐A base pairs within polymer systems, indicating that the strength of hydrogen bonds in RNA U‐A pairs is stronger than that in DNA T‐A base pairs. © 2009 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 47: 6388–6395, 2009