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1.
We have used solid-state 17O NMR experiments to determine the 17O quadrupole coupling (QC) tensor and chemical shift (CS) tensor for the carbonyl oxygen in p-nitro-[1-(17)O]benzaldehyde. Analyses of solid-state 17O NMR spectra obtained at 11.75 and 21.15 T under both magic-angle spinning (MAS) and stationary conditions yield the magnitude and relative orientation of these two tensors: CQ = 10.7 +/- 0.2 MHz, etaQ = 0.45 +/- 0.10, delta11 = 1050 +/- 10, delta22 = 620 +/- 10, delta33 = -35 +/- 10, alpha = 90 +/- 10, beta = 90 +/- 2, gamma = 90 +/- 10 degrees. The principal component of the 17O CS tensor with the most shielding, delta33, is perpendicular to the H-C=O plane, and the tensor component with the least shielding, delta11, lies along the C=O bond. For the 17O QC tensor, the largest (chi(zz)) and smallest (chi(xx)) components are both in the H-C=O plane being perpendicular and parallel to the C=O bond, respectively. This study represents the first time that these two fundamental 17O NMR tensors have been simultaneously determined for the carbonyl oxygen of an aldehyde functional group by solid-state 17O NMR. The reported experimental solid-state 17O NMR results provide the first set of reliable data to allow evaluation of the effect of electron correlation on individual CS tensor components. We found that the electron correlation effect exhibits significant influence on 17O chemical shielding in directions within the H-C=O plane. We have also carefully re-examined the existing experimental data on the 17O spin-rotation tensor for formaldehyde and proposed a new set of best "experimental" 17O chemical shielding tensor components: sigma11 = -1139 +/- 80, sigma22 = -533 +/- 80, sigma33 = 431 +/- 5, and sigma(iso) = -414 +/- 60 ppm. Using this new set of data, we have evaluated the accuracy of quantum chemical calculations of the 17O CS tensors for formaldehyde at the Hartree-Fock (HF), density-functional theory (DFT), M?ller-Plesset second-order perturbation (MP2), and coupled-cluster singles and doubles (CCSD) levels of theory. The conclusion is that, while results from HF and DFT tend to underestimate the electron correlation effect, the MP2 method overestimates its contribution. The CCSD results are in good agreement with the experimental data.  相似文献   

2.
Ab initio shielding tensor calculations were carried out on residues in human ubiquitin. Reported experimental data on isotropic and anisotropic components of the amide proton chemical shifts were used as benchmarks to test the validity of the chosen basis sets as well as methods in structure optimization and shielding calculations. The best agreement with the experimental values was observed when the 6-311**G and 6-311++G(2d,2p) basis sets were used to optimize the structure and to calculate the shielding tensor, respectively. The same method was employed in subsequent model calculations to characterize the dependence of amide proton shielding to the local structure. Both the isotropic and the anisotropic components of the symmetric tensor were found to depend very strongly on the hydrogen bond length. A weaker dependence can also be observed for the hydrogen bond angle. Antisymmetric tensor elements were found to be relatively small. This study permits separation of various local structure contributions to the amide proton shielding tensor that complements scarce experimental data.  相似文献   

3.
Quantum chemical calculations of the nuclear shielding tensor, the nuclear quadrupole coupling tensor, and the spin-rotation tensor are reported for the Xe dimer using ab initio quantum chemical methods. The binary chemical shift delta, the anisotropy of the shielding tensor Delta sigma, the nuclear quadrupole coupling tensor component along the internuclear axis chi( parallel ), and the spin-rotation constant C( perpendicular ) are presented as a function of internuclear distance. The basis set superposition error is approximately corrected for by using the counterpoise correction (CP) method. Electron correlation effects are systematically studied via the Hartree-Fock, complete active space self-consistent field, second-order M?ller-Plesset many-body perturbation, and coupled-cluster singles and doubles (CCSD) theories, the last one without and with noniterative triples, at the nonrelativistic all-electron level. We also report a high-quality theoretical interatomic potential for the Xe dimer, gained using the relativistic effective potential/core polarization potential scheme. These calculations used valence basis set of cc-pVQZ quality supplemented with a set of midbond functions. The second virial coefficient of Xe nuclear shielding, which is probably the experimentally best-characterized intermolecular interaction effect in nuclear magnetic resonance spectroscopy, is computed as a function of temperature, and compared to experiment and earlier theoretical results. The best results for the second virial coefficient, obtained using the CCSD(CP) binary chemical shift curve and either our best theoretical potential or the empirical potentials from the literature, are in good agreement with experiment. Zero-point vibrational corrections of delta, Delta sigma, chi (parallel), and C (perpendicular) in the nu=0, J=0 rovibrational ground state of the xenon dimer are also reported.  相似文献   

4.
Tetraazanaphthalenes are diatropic molecules, whose magnetic response to a magnetic field perpendicular to the molecular plane closely resembles that of naphthalene. The out-of-plane component of the magnetic susceptibility tensor and its strong anisotropy can be used as quantifiers of magnetic aromaticity. Maps showing streamlines and modulus of the current density field provide clear evidence for diatropicity of these systems. They also explain the strong anisotropy of carbon and nitrogen magnetic shielding, which is determined by the big out-of-plane component of the nuclear shielding tensor. The electronic ring currents observed in the map deshield the nuclei of ring hydrogens by enforcing the local magnetic field and diminishing the out-of-plane component of proton shielding.  相似文献   

5.
The proton magnetic shielding constants in the water molecule and its linear perpendicular dimer are computed from SCF-MO-LCGO wave functions by using the uncoupled Hartree-Fock variation-perturbation procedure due to Karplus and Kolker. The convergence of the calculated shielding constants as well as their gauge dependence is studied. The final results for 17-term polynomial variation function indicate that the best choice for the gauge origin corresponds to the molecular electronic centroid.The calculated proton magnetic shielding constant in the water molecule is in remarkable agreement with experimental data and favourably compares with the best coupled Hartree-Fock results. It follows from the calculations for the water dimer that the H-bond NMR-shift amounts in this case —1.0 ppm and qualitatively agrees with the experimental data for the liquid water.  相似文献   

6.
Spatial models of the current density field induced in the cyclopropane molecule by stationary, homogeneous magnetic fields, parallel to either the C3 or the C2 symmetry axis, have been constructed. A compact, abridged representation of the models is given via stagnation graphs that convey essential information. Maps of streamlines and moduli are also reported to complete current models that have proven useful to rationalize magnetic tensor properties, that is, magnetizability, 1H and 13C nuclear shieldings, and magnetic shielding along the C3 symmetry axis. Plots of Biot-Savart magnetic shielding density combined with current density visualization yield an accurate, detailed account of the shielding mechanisms. The magnetropicity of the system described by the current density model is fully consistent with the magnitude of magnetic tensors calculated at near Hartree-Fock level. In a field perpendicular to the molecular plane, cyclopropane sustains a diatropic sigma-ring current with the following peculiar features: (i) it follows the molecular periphery rather than the CC framework; (ii) it bifurcates in the proximity of the methylene moieties flowing along the CH bonds, both above and below the sigma(h) plane; (iii) it has an effect on the values of response properties, although it is not as large as expected from naive arguments (e.g., the center-of-mass value of the magnetic shielding constant is dominated by in-plane components rather than the out-of-plane component, which is in contrast to pi-aromatic systems such as benzene); (iv) it has a negligible effect on the strong anisotropy of carbon magnetic shielding, which is shown to arise from local currents. No evidence for strong diatropism, and therefore sigma-aromaticity of the cyclopropane molecule, was found on the magnetic criterion.  相似文献   

7.
The proton NMR in single crystals of potassium hydrogen maleate has been sttudied by means of multiple-pulse line-narrowing techniques. The magnetic shielding tensors of all magnetically inequivalent protons in the unit cell could be determined independently. Two of these protons are carboxylic, forming hydrogen bonds. The orientations of the shift tensors are consistent with the position of the hydrogens at the midpoints of the 0–0 intervals. The range of anisotropy of 32 ppm, found for the shift tensor of the caboxylic hydrogen, is larger than that found for hydrogen bonds in acids and seems to be characteristics of acidic salts.The other protons in the unit cell are olefinic. Two features distinguish this type of protons from those studied so far: (1) The magnetic shielding tensor is not even approximately axially symmetric, the principal values being ?2.4, ?5.1, ?7.3 ± 05 ppm (from adamantane); and (2) the principal directions reflect all characteristic directions of the carboncarbon double bond (while the CH direction is of no importance). The principal value in the direction perpendicular to the sp2 system is the least shielded one.  相似文献   

8.
We report, for the first time, a prediction of the line shapes that would be observed in the (129)Xe nuclear magnetic resonance (NMR) spectrum of xenon in the cages of clathrate hydrates. We use the dimer tensor model to represent pairwise contributions to the intermolecular magnetic shielding tensor for Xe at a specific location in a clathrate cage. The individual tensor components from quantum mechanical calculations in clathrate hydrate structure I are represented by contributions from parallel and perpendicular tensor components of Xe-O and Xe-H dimers. Subsequently these dimer tensor components are used to reconstruct the full magnetic shielding tensor for Xe at an arbitrary location in a clathrate cage. The reconstructed tensors are employed in canonical Monte Carlo simulations to find the Xe shielding tensor component along a particular magnetic field direction. The shielding tensor component weighted according to the probability of finding a crystal fragment oriented along this direction in a polycrystalline sample leads to a predicted line shape. Using the same set of Xe-O and Xe-H shielding functions and the same Xe-O and Xe-H potential functions we calculate the Xe NMR spectra of Xe atom in 12 distinct cage types in clathrate hydrates structures I, II, H, and bromine hydrate. Agreement with experimental spectra in terms of the number of unique tensor components and their relative magnitudes is excellent. Agreement with absolute magnitudes of chemical shifts relative to free Xe atom is very good. We predict the Xe line shapes in two cages in which Xe has not yet been observed.  相似文献   

9.
The principal (13)C chemical-shift values for the pi-[TCNE](2)(2-) dimer anion within an array of counterions have been measured to understand better the electronic structure of these atypical chemical species in several related TCNE-based structures. The structure of pi-[TCNE](2)(2-) is unusual as it contains two very long C-C bond lengths (ca. 2.9 Angstroms) between the two monomeric units and has been found to exist as a singlet state, suggestive of a (1)A(1g) (b(2u)(2)b(1g)(0)) electronic configuration. A systematic study of several oxidation states of [TCNE](n) (n = 0, 1-, 2-) was conducted to determine how the NMR chemical-shift tensor values change as a function of electronic structure and to understand the interactions that lead to spin-pairing of the monomer units. The density functional theory (DFT) calculated nuclear shielding tensors are correlated with the experimentally determined principal chemical-shift values. Such theoretical methods provide information on the tensor magnitudes and orientations of their principal tensor components with respect to the molecular frame. Both theoretical and experimental ethylenic chemical-shielding tensors reveal high sensitivity in the component, delta(perpendicular), lying in the monomer molecular plane and perpendicular to the pi-electron plane. This largest shift dependence on charge density is observed to be about -111 ppm/e(-) for delta(perpendicular). The component in the molecular plane but parallel to the central C=C bond, delta(parallel), exhibits a sensitivity of approximately -43 ppm/e(-). However, the out-of-plane component delta'(perpendicular) shows a minimal dependence of -2.6 ppm/e(-) on the oxidation state (n) of [TCNE](n). These relative values support the claim that it is changes within the ethylenic pi-electrons and not the sigma-electrons that best account for the dramatic variations in bonding and shift tensors in this series of compounds. Concerning the intraion bonding, relatively weak Wiberg bond orders between the two monomeric components of the dimer correlate with the long bonds linking the two [TCNE(*)](-) monomers. The chemical-shift tensors for the cyano group, compared to the ethylene shifts, exhibit a reduced sensitivity on the TCNE oxidation state. The experimental principal chemical-shift components agree (within typical errors) with the calculated quantum mechanical shieldings used to correlate the bonding. The embedded ion model (EIM) was used to investigate the typically large electrostatic lattice potential in these ionic materials. Chemical-shielding principal values calculated with the EIM model differ from experiment by +/-3.82 ppm on average, whereas in the absence of an electrostatic field model, the experimental and theoretical results agree by +/-4.42 ppm, which is only a modest increase in error considering the overall ionic magnitudes associated with the tensor variations. Apparently, the effects of the sizable long-range electrostatic fields cancel when the shifts are computed because of lattice symmetry.  相似文献   

10.
We have used ab initio quantum chemical techniques to compute the (13)C(alpha) and (13)C(beta) shielding surfaces for the 14 amino acids not previously investigated (R. H. Havlin et al., J. Am. Chem. Soc. 1997, 119, 11951-11958) in their most popular conformations. The spans (Omega = sigma(33) - sigma(11)) of all the tensors reported here are large ( approximately 34 ppm) and there are only very minor differences between helical and sheet residues. This is in contrast to the previous report in which Val, Ile and Thr were reported to have large ( approximately 12 ppm) differences in Omega between helical and sheet geometries. Apparently, only the beta-branched (beta-disubstituted) amino acids have such large CSA span (Omega) differences; however, there are uniformly large differences in the solution-NMR-determined CSA (Deltasigma = sigma(orth) - sigma(par)) between helices and sheets in all amino acids considered. This effect is overwhelmingly due to a change in shielding tensor orientation. With the aid of such shielding tensor orientation information, we computed Deltasigma values for all of the amino acids in calmodulin/M13 and ubiquitin. For ubiquitin, we find only a 2.7 ppm rmsd between theory and experiment for Deltasigma over an approximately 45 ppm range, a 0.96 slope, and an R(2) = 0.94 value when using an average solution NMR structure. We also report C(beta) shielding tensor results for these same amino acids, which reflect the small isotropic chemical shift differences seen experimentally, together with similar C(beta) shielding tensor magnitudes and orientations. In addition, we describe the results of calculations of C(alpha), C(beta), C(gamma)1, C(gamma)2, and C(delta) shifts in the two isoleucine residues in bovine pancreatic trypsin inhibitor and the four isoleucines in a cytochrome c and demonstrate that the side chain chemical shifts are strongly influenced by chi(2) torsion angle effects. There is very good agreement between theory and experiment using either X-ray or average solution NMR structures. Overall, these results show that both C(alpha) backbone chemical shift anisotropy results as well as backbone and side chain (13)C isotropic shifts can now be predicted with good accuracy by using quantum chemical methods, which should facilitate solution structure determination/refinement using such shielding tensor surface information.  相似文献   

11.
The nuclear magnetic shielding tensors of the protons in potassium hydrogen maleate (KHM) have been determined in single crystals by means of multiple pulse line narrowing techniques at 270 MHz. The increase of resolution in solid state NMR spectra on switching the spectrometer frequency from 90 MHz to 270 MHz is demonstrated. The results for the carboxylic protons in KHM agree fully with those of a previous 90 MHz study. Unlike at 90 MHz separate lines from individual olefinic proton sites could be resolved at 270 MHz allowing a straightforward determination of the corresponding shielding tensors. The principal shielding components found are 0.9, ?2.0, ?3.1 ± 0.2 ppm relative to liquid water. An assignment of the four experimental shielding tensors to the four olefinic sites in the crystal is proposed on the basis of molecular and local symmetry. According to this assignment the most shielded direction of the olefinic protons is in the molecular plane of the maleate anion and perpendicular to the CH bond axis.  相似文献   

12.
The electronic properties of 2-furyl and 3-furyl substituents attached to phosphanes and phosphonium salts were studied by means of IR spectroscopy and experimental and computational (31)P NMR spectroscopy. The heteroaromatic systems proved to be electron withdrawing with respect to phenyl substituents. However, phosphorus atoms with attached furyl substituents are strongly shielded in NMR. The reason for this phenomenon was studied by solid state (31)P MAS NMR experiments. The chemical shift tensor was extracted, and the orientation within the molecules was determined. The tensor component sigma(33), which is effected the most by furyl systems, is oriented perpendicular to the P-C bonds of the substituents. P-furyl bonds are shorter than P-phenyl bonds. We assume therefore a lower ground-state energy of the molecules, because of the electron withdrawing properties of the 2-furyl systems. The sigma(para) component of the (31)P NMR magnetic shielding is therefore smaller, which results in an overall increase of the magnetic shielding.  相似文献   

13.
The proton NMR in single crystals of maleic acid has been studied by means of multiple pulse line-narrowing techniques. The magnetic shielding tensors of the four magnetically inequivalent protons forming hydrogen bonds could be determined independently. The transferability of the magnetic shielding tensor is put forward as a physical index of the hydrogen bond. The connection between the principal directions of the shielding tensors and the bond directions is demonstrated and used as a means to obtain refined hydrogen positions in the crystal structure. Only one composite line of the olefinic protons could be observed. Its analysis in terms of the individual tensors of the olefinic protons suggests that the double bond principal directions are reflected in those of the shielding tensors in contradistinction to the single bond systems. The origin of this effect is discussed.  相似文献   

14.
Incomplete motional averaging of chemical shift anisotropy upon weak alignment of nucleic acids and proteins in a magnetic field results in small changes in chemical shift. Knowledge of nucleus-specific chemical shift (CS) tensor magnitudes and orientations is necessary to take full advantage of these measurements in biomolecular structure determination. We report the determination by liquid crystal NMR of the CS tensors for all ribose carbons in A-form helical RNA, using a series of novel 3D NMR pulse sequences for accurate and resolved measurement of the ribose (13)C chemical shifts. The orientation of the riboses relative to the rhombic alignment tensor of the molecule studied, a stem-loop sequence corresponding to helix-35 of 23S rRNA, is known from an extensive set of residual dipolar couplings (RDC), previously used to refine its structure. Singular-value-decomposition fits of the chemical shift changes to this structure, or alternatively to a database of helical RNA X-ray structures, provide the CS tensor for each type of carbon. Quantum chemical calculations complement the experimental results and confirm that the most shielded tensor component lies approximately along the local carbon-oxygen bond axis in all cases and that shielding anisotropy for C3' and C4' is much larger than for C1' and C2', with C5' being intermediate.  相似文献   

15.
The influence of the spin-Zeeman (SZ) operator in the evaluation of the spin-orbit effect on the nuclear magnetic shielding tensor in the context of the linear response within the elimination of the small component approach is critically discussed. It is shown that such term yields no contribution to the isotropic nuclear magnetic shielding constant, but it may be of great importance in the determination of individual tensor components, and particularly of the tensor anisotropy. In particular, an interesting relation between the SZ and orbital Zeeman contributions to the spin-orbit effect for the case of linear molecules is shown to hold. Numerical examples for the BrH, IH, and XeF(2) molecules are presented which show that, provided the SZ term is taken into account, results of the individual shielding tensor components and the tensor anisotropy are in good agreement with those obtained by other theoretical methods, and particularly by the Dirac-Hartree-Fock approach.  相似文献   

16.
Nuclei of hydrogen atoms located over a carbon-carbon double bond in the presence of a strong magnetic field experience a perturbed magnetic field caused primarily by the magnetic anisotropy of the bond. However, the commonly used theoretical model for predicting the shielding effect of an alkene double bond on hydrogen nuclei is sometimes inconsistent with the observed proton NMR chemical shifts in structures that have covalently bonded hydrogens located over a carbon-carbon double bond. We have used the ab initio gauge including atomic orbital (GIAO) method to calculate isotropic shielding values and to determine the proton NMR shielding increments for a simple model system: methane held at various positions over ethene. These shielding increments calculated for one proton of methane have been mapped as a function of their position in Cartesian coordinates relative to the center of ethene. A mathematical function has been fit to this three-dimensional shielding increment surface at each of four distances from the face of the ethene molecule. Additionally, a single mathematical equation has been developed for predicting the shielding caused by the carbon-carbon double bond in ethene. In contrast to the traditionally employed shielding model, our results predict deshielding for protons within 3 Å above the center of a carbon-carbon double bond, consistent with experimental observations in several molecular systems. The NMR shielding increments predicted by this equation are compared to observed shielding increments in some test alkenes.  相似文献   

17.
Complete nuclear magnetic resonance (NMR) chemical-shielding tensors, sigma, have been computed at different levels of density-functional theory (DFT), within the gauge-including atomic orbital (GIAO) formalism, for the atoms of the peptide model For-L-Ala-NH2 as a function of the backbone dihedral angles phi and psi by employing a dense grid of 10 degrees. A complete set of rigorously orthogonal symmetric tensor invariants, {sigma iso, rho, tau}, is introduced, where sigma iso is the usual isotropic chemical shielding, while the newly introduced rho and tau parameters describe the magnitude and the orientation/shape of the chemical-shielding anisotropy (CSA), respectively. The set {sigma iso, rho, tau} is unaffected by unitary transformations of the symmetric part of the shielding tensor. The mathematically and physically motivated {rho, tau} anisotropy pair is easily connected to more traditional shielding anisotropy measures, like span (Omega) and skew (kappa). The effectiveness of the different partitions of the CSA information in predicting conformations of peptides and proteins has been tested throughout the Ramachandran space by generating theoretical NMR anisotropy surfaces for our For-L-Ala-NH2 model. The CSA surfaces, including Omega(phi, psi), kappa(phi, psi), rho(phi, psi), and tau(phi, psi) are highly structured. Individually, none of these surfaces is able to distinguish unequivocally between the alpha-helix and beta-strand secondary structural types of proteins. However, two- and three-dimensional correlated plots, including Omega versus kappa, rho versus tau, and sigma iso versus rho versus tau, especially for 13Calpha, have considerable promise in distinguishing among all four of the major secondary structural elements.  相似文献   

18.
We have calculated the components of the paramagnetic part of the magnetic shielding tensor for nuclei in molecules of LiH, HF, and H2O within the uncoupled variant of Hartree-Fock-Roothaan perturbation theory, taking into account the dependence of the original basis set of Slater-type AO's (STO's) on the perturbation parameter. We have shown that it is necessary to take into account such a dependence when calculating the components of the magnetic shielding tensor in minimal basis sets of STO's. We have carried out a comparative analysis of the data obtained with results of other approaches.Translated from Teoreticheskaya i Éksperimental'naya Khimiya, Vol. 24, No. 5, pp. 527–532, September–October, 1988  相似文献   

19.
The shielding constant of the hydrogen-bonded proton in the linear perpendicular water dimer is calculated from the SCF MO LCGO wavefunction unsing the uncoupled Hartree-Fock variation-perturbation procedure of Karplus and Kolker. The obtained result (27.61 ppm) is compared with the experimental estimate of the proton shielding in the liquid water (25.62 ppm). Comparing with the proton shielding in the water molecule, calculated previously within the same approximation (28.30 ppm), the non-empirical hydrogen-bond shift of −0.69 ppm is found.  相似文献   

20.
Magnetic shielding constants are calculated for the protons in XOH and XOH…OH2 (XH, CH3, NH2, OH and F) molecules using a slightly extended set of atomic functions modified by gauge factors. These results are used to determine theoretical values for the NMR hydrogen bond shifts in the XOH…OH2 systems. Such theoretical data are consistent with the few available experimental data. An analysis of the theoretical results reveals that there are three major types of shielding contribution to the NMR hydrogen bond shift; (a) a deshielding change due to the variation of the local currents on the hydrogen bonded proton; (b) a reduction in shielding from currents localized on the oxygen atom of the proton donor; (c) a deshielding contribution from currents induced on the oxygen atom of the proton acceptor. Except for the water dimer, contributions (a), (b) and (c) are of comparable importance for changes in isotropic shielding. For (H2O)2 contributions (a) and (c) are somewhat more important than contribution (b). Contribution (c) is almost totally responsible for the changes in the anistropies of the shielding tensors associated with the hydrogen bonded protons. The proton shielding anisotropy changes which occur on hydrogen bond formation are generally much larger than the corresponding variations in the isotropic values of the shielding tensors. This suggests that proton magnetic shielding anisotropies may be more sensitive measures of features of hydrogen bonding than are isotropic proton shielding constants.  相似文献   

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